Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009728g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-41 171.8 84 100.0
Nitab4.5_0000527g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-35 152.5 83 89.2
Nitab4.5_0001569g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-22 108.6 83 65.1
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-21 105.1 83 63.9
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-20 101.7 83 62.7
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-19 99.8 83 61.4
Nitab4.5_0000013g0580 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-18 96.3 83 60.2
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-17 93.2 83 59.0
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-17 90.5 83 57.8
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-16 87.8 83 56.6
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-14 83.2 83 55.4
Nitab4.5_0006300g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-14 83.2 50 76.0
Nitab4.5_0006137g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-14 80.1 83 54.2
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-13 79.3 83 49.4
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-12 76.3 83 48.2
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-12 75.9 83 53.0
Nitab4.5_0003436g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-12 74.3 75 54.7
Nitab4.5_0000010g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-12 73.9 75 52.0
Nitab4.5_0000357g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-10 69.7 67 55.2
Nitab4.5_0000213g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-10 68.2 60 55.0
Nitab4.5_0002658g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-10 67.4 83 47.0
Peaxi162Scf00423g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 6.0e-10 67.4 83 47.0
Nitab4.5_0000044g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-09 66.2 80 43.8
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-09 66.2 83 42.2
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-09 65.9 83 45.8
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-09 65.9 78 46.2
Nitab4.5_0012105g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-09 65.9 83 45.8
Peaxi162Scf00236g00077 Petunia axillaris HOM05D000024 ORTHO05D000007 2.3e-09 65.5 83 45.8
Peaxi162Scf01030g00115 Petunia axillaris HOM05D000024 ORTHO05D000007 2.3e-09 65.5 83 45.8
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-09 64.7 79 46.8
Nitab4.5_0002956g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-09 63.9 83 44.6
Nitab4.5_0024598g0010 Nicotiana tabacum HOM05D000024 ORTHO05D284621 6.6e-09 63.9 76 50.0
Nitab4.5_0003978g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 63.2 68 50.0
Nitab4.5_0000847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-08 62.4 82 45.1
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-08 61.6 83 41.0
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-08 61.6 82 40.2
Nitab4.5_0001286g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-08 61.2 87 41.4
Nitab4.5_0001704g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-08 61.2 83 44.6
Nitab4.5_0002157g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-08 60.8 53 54.7
Nitab4.5_0000234g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-08 60.5 59 50.8
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-08 60.1 82 43.9
Nitab4.5_0003236g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-08 60.1 87 40.2
Nitab4.5_0009838g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.6e-08 60.1 78 41.0
Nitab4.5_0000612g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 59.7 83 37.3
Nitab4.5_0000061g0360 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 59.3 79 45.6
Nitab4.5_0000313g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 59.3 41 65.9
Nitab4.5_0002697g0040 Nicotiana tabacum HOM05D000351 ORTHO05D000007 1.6e-07 59.3 76 48.7
Nitab4.5_0000507g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-07 58.5 68 47.1
Nitab4.5_0001660g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-07 58.5 68 48.5
Nitab4.5_0004776g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-07 58.5 80 38.8
Nitab4.5_0005859g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-07 58.5 83 44.6
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 50 54.0
Nitab4.5_0000961g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 59 47.5
Nitab4.5_0002223g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 81 43.2
Nitab4.5_0002249g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 76 39.5
Nitab4.5_0007582g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 83 41.0
Nitab4.5_0000500g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-07 57.4 63 49.2
Nitab4.5_0000575g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-07 57.4 83 41.0
Nitab4.5_0002977g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-07 57.4 83 39.8
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-07 57.4 66 45.5
Nitab4.5_0002847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-07 57.0 83 42.2
Nitab4.5_0003665g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-07 57.0 87 40.2
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 56.6 87 39.1
Nitab4.5_0000472g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 56.6 64 48.4
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 56.6 85 37.6
Nitab4.5_0000468g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 78 37.2
Nitab4.5_0000902g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 83 41.0
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 84 40.5
Nitab4.5_0009312g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 78 39.7
Nitab4.5_0000242g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 55.8 83 41.0
Nitab4.5_0001733g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 55.8 54 50.0
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.5 73 42.5
Nitab4.5_0000848g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.5 85 37.6
Nitab4.5_0000993g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.5 83 42.2
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.5 82 37.8
Nitab4.5_0000677g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-06 55.1 78 41.0
Nitab4.5_0003940g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-06 55.1 77 40.3
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 54.7 79 40.5
Solyc04g074620.1 Solanum lycopersicum HOM05D000024 ORTHO05D000007 4.0e-06 54.7 61 49.2
Nitab4.5_0000883g0200 Nicotiana tabacum HOM05D011002 ORTHO05D000007 5.2e-06 54.3 50 50.0
Nitab4.5_0000261g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 39 61.5
Nitab4.5_0000270g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 83 38.6
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 80 38.8
Nitab4.5_0002331g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 78 37.2
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 83 38.6
Nitab4.5_0006838g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 82 39.0
Nitab4.5_0002616g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.0e-06 53.5 59 45.8
Nitab4.5_0006080g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.0e-06 53.5 75 42.7
Nitab4.5_0009128g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.0e-06 53.5 37 62.2


User provided reference genes

Program Settings