Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 1.6e-36 155.6 80 100.0
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 9.7e-34 146.4 80 92.5
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 2.3e-27 125.2 80 78.8
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 2.8e-25 118.2 80 77.5
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 4.1e-24 114.4 80 75.0
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 4.1e-24 114.4 81 75.3
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 2.6e-23 111.7 80 73.8
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 3.4e-23 111.3 80 75.0
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 3.4e-23 111.3 80 75.0
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 4.5e-23 110.9 78 75.6
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 5.9e-23 110.5 80 73.8
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 5.9e-23 110.5 80 72.5
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 7.7e-23 110.2 80 73.8
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 7.7e-23 110.2 79 73.4
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 1.3e-22 109.4 80 73.8
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 2.9e-22 108.2 80 72.5
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 2.9e-22 108.2 83 69.9
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 3.8e-22 107.8 80 71.2
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 5.0e-22 107.5 80 73.8
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 5.0e-22 107.5 80 73.8
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 5.0e-22 107.5 80 73.8
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 5.0e-22 107.5 79 72.2
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 6.5e-22 107.1 80 72.5
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 6.5e-22 107.1 80 72.5
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 8.5e-22 106.7 80 71.2
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 8.5e-22 106.7 83 69.9
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 8.5e-22 106.7 78 74.4
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 1.1e-21 106.3 80 72.5
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 1.1e-21 106.3 65 84.6
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 1.4e-21 105.9 83 72.3
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 2.5e-21 105.1 80 68.8
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 3.2e-21 104.8 80 71.2
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 3.2e-21 104.8 80 71.2
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 4.2e-21 104.4 80 67.5
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 5.5e-21 104.0 83 68.7
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 5.5e-21 104.0 79 69.6
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 1.2e-20 102.8 82 67.1
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 1.6e-20 102.4 82 65.9
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 2.1e-20 102.1 80 70.0
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 3.6e-20 101.3 80 68.8
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 4.7e-20 100.9 80 68.8
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 4.7e-20 100.9 78 67.9
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 6.1e-20 100.5 78 70.5
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 6.1e-20 100.5 80 67.5
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 6.1e-20 100.5 78 67.9
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 7.9e-20 100.1 81 69.1
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 1.0e-19 99.8 80 70.0
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 1.0e-19 99.8 79 65.8
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 1.4e-19 99.4 79 67.1
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 1.8e-19 99.0 80 67.5
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 2.3e-19 98.6 80 67.5
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 3.9e-19 97.8 80 68.8
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 3.9e-19 97.8 89 64.0
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 3.9e-19 97.8 80 65.0
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 6.7e-19 97.1 91 62.6
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 1.1e-18 96.3 80 67.5
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 2.0e-18 95.5 80 63.8
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 3.3e-18 94.7 80 66.2
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 3.3e-18 94.7 78 64.1
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 4.4e-18 94.4 85 64.7
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 7.4e-18 93.6 80 62.5
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 9.7e-18 93.2 79 65.8
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 1.3e-17 92.8 75 68.0
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 1.3e-17 92.8 79 62.0
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 1.7e-17 92.4 96 55.2
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 3.7e-17 91.3 80 65.0
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 6.3e-17 90.5 78 61.5
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 6.3e-17 90.5 78 62.8
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.1e-16 89.7 82 64.6
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 1.1e-16 89.7 82 64.6
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.4e-16 88.6 80 65.0
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 5.3e-16 87.4 68 69.1
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 5.3e-16 87.4 83 60.2
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 7.0e-16 87.0 81 60.5
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.0e-16 87.0 82 61.0
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 9.1e-16 86.7 82 61.0
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 9.1e-16 86.7 82 61.0
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 9.1e-16 86.7 89 55.1
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 1.2e-15 86.3 82 62.2
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 1.6e-15 85.9 77 64.9
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.0e-15 85.5 82 59.8
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 2.6e-15 85.1 81 61.7
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.6e-15 85.1 82 61.0
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 3.5e-15 84.7 76 64.5
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.5e-15 84.3 82 59.8
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.5e-15 84.3 82 59.8
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.7e-15 83.6 82 59.8
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 1.7e-14 82.4 64 71.9
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 2.2e-14 82.0 91 57.1
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 8.5e-14 80.1 82 56.1
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 1.9e-13 79.0 91 52.7
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 5.5e-13 77.4 78 57.7
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 9.4e-13 76.6 91 51.6
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.0e-11 73.2 74 59.5
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 5.2e-11 70.9 83 53.0
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 5.2e-11 70.9 83 53.0
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 1.1e-08 63.2 82 50.0
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 7.0e-08 60.5 41 70.7
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 1.2e-07 59.7 85 44.7
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 1.2e-07 59.7 83 48.2
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 2.2e-06 55.5 82 47.6


User provided reference genes

Program Settings