Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009709g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 3.5e-67 258.1 124 100.0
Nitab4.5_0001796g0150 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.6e-54 215.3 115 89.6
Nitab4.5_0001788g0190 Nicotiana tabacum HOM05D002660 ORTHO05D011807 3.4e-54 214.9 119 88.2
Nitab4.5_0000172g0830 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.7e-51 205.3 115 85.2
Nitab4.5_0000172g1900 Nicotiana tabacum HOM05D002660 ORTHO05D011807 7.9e-51 203.8 117 83.8
Nitab4.5_0000592g0110 Nicotiana tabacum HOM05D002660 ORTHO05D011807 7.4e-41 170.6 99 86.9
Nitab4.5_0004300g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.5e-38 162.9 86 93.0
Nitab4.5_0027526g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.9e-36 156.0 91 84.6
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 3.6e-35 151.8 117 63.2
Nitab4.5_0026598g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 4.4e-33 144.8 75 89.3
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 6.5e-29 131.0 94 71.3
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 2.7e-27 125.6 118 54.2
Nitab4.5_0007225g0070 Nicotiana tabacum HOM05D002660 ORTHO05D011807 9.7e-25 117.1 54 94.4
Nitab4.5_0004300g0090 Nicotiana tabacum HOM05D002660 ORTHO05D011807 8.2e-24 114.0 58 86.2
Nitab4.5_0000172g1410 Nicotiana tabacum HOM05D002660 ORTHO05D011807 7.0e-23 110.9 83 66.3
Nitab4.5_0002716g0050 Nicotiana tabacum HOM05D002660 ORTHO05D011807 3.5e-22 108.6 49 95.9
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-19 100.1 117 47.9
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-19 100.1 117 47.9
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-19 100.1 117 47.9
arahy.Tifrunner.gnm1.ann1.QE2SNE Arachis hypogaea HOM05D002660 ORTHO05D013121 8.8e-18 94.0 77 55.8
CAN.G70.3 Capsicum annuum HOM05D002660 ORTHO05D003902 8.8e-18 94.0 74 67.6
Nitab4.5_0000172g2030 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.5e-17 93.2 76 67.1
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 5.7e-17 91.3 87 54.0
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 8.3e-16 87.4 110 46.4
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 8.3e-16 87.4 110 46.4
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 2.4e-15 85.9 84 45.2
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 7.0e-15 84.3 60 68.3
CAN.G1001.30 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-12 77.0 66 59.1
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 2.5e-12 75.9 79 57.0
Solyc00g142160.1 Solanum lycopersicum HOM05D002660 ORTHO05D011807 1.2e-11 73.6 54 66.7
Dinv06709 Davidia involucrata HOM05D002660 ORTHO05D013121 2.7e-11 72.4 90 41.1
Lsat_1_v5_gn_8_93880 Lactuca sativa HOM05D002660 ORTHO05D013121 2.7e-11 72.4 112 41.1
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 2.3e-10 69.3 76 52.6
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 4.0e-10 68.6 62 56.5
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 5.2e-10 68.2 53 66.0
Sc05g0004270 Simmondsia chinensis HOM05D002660 ORTHO05D011807 8.8e-10 67.4 67 49.3
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 1.5e-09 66.6 115 35.7
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.5e-09 66.6 52 67.3
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.5e-09 66.6 52 67.3
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 2.6e-09 65.9 86 48.8
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 2.6e-09 65.9 115 36.5
PGSC0003DMG400023071 Solanum tuberosum HOM05D002660 ORTHO05D011807 4.4e-09 65.1 53 62.3
Actinidia11788 Actinidia chinensis HOM05D002660 ORTHO05D013121 5.7e-09 64.7 80 42.5
CAN.G1126.7 Capsicum annuum HOM05D002660 ORTHO05D011807 1.3e-08 63.5 51 62.7
CAN.G1159.14 Capsicum annuum HOM05D002660 ORTHO05D011807 1.3e-08 63.5 51 62.7
CAN.G200.4 Capsicum annuum HOM05D002660 ORTHO05D011807 1.3e-08 63.5 51 62.7
Solyc11g030850.1 Solanum lycopersicum HOM05D002660 ORTHO05D011807 2.2e-08 62.8 52 65.4
Actinidia34821 Actinidia chinensis HOM05D002660 ORTHO05D013121 2.8e-08 62.4 65 44.6
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 4.9e-08 61.6 46 67.4
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.1e-07 60.5 117 34.2
CAN.G134.22 Capsicum annuum HOM05D002660 ORTHO05D011807 1.8e-07 59.7 51 58.8
Solyc09g056110.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.1e-07 58.9 52 57.7
Sed0005389 Sechium edule HOM05D002660 ORTHO05D013121 4.1e-07 58.5 115 33.9
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 5.4e-07 58.2 108 34.3
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 7.0e-07 57.8 108 34.3
Eucgr.J01097 Eucalyptus grandis HOM05D002660 ORTHO05D011807 9.2e-07 57.4 82 41.5
SGA_v2.0_scaffold245G44665 Striga asiatica HOM05D002660 ORTHO05D011807 3.5e-06 55.5 50 46.0


User provided reference genes

Program Settings