Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009709g0010 Nicotiana tabacum HOM05D005210 ORTHO05D010286 2.3e-56 221.9 101 100.0
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 4.0e-45 184.5 98 87.8
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 4.0e-45 184.5 98 87.8
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 7.9e-41 170.2 98 81.6
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 3.9e-40 167.9 93 83.9
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 8.7e-40 166.8 93 82.8
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 8.7e-40 166.8 93 82.8
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 1.9e-39 165.6 98 79.6
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 5.7e-39 164.1 93 81.7
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 1.6e-38 162.5 93 80.6
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 4.5e-36 154.5 92 80.4
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 7.2e-34 147.1 98 73.5
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 2.1e-33 145.6 86 76.7
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 2.3e-32 142.1 93 74.2
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 3.0e-32 141.7 87 75.9
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 5.0e-27 124.4 73 78.1
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 3.2e-26 121.7 79 73.4
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 3.2e-26 121.7 79 73.4
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 4.6e-25 117.9 68 82.4
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 4.6e-25 117.9 68 82.4
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 4.6e-25 117.9 68 82.4
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 1.8e-24 115.9 61 86.9
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 2.3e-24 115.5 74 74.3
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 2.3e-24 115.5 68 76.5
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 3.3e-23 111.7 66 78.8
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 2.4e-21 105.5 79 65.8
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 1.2e-20 103.2 60 78.3
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 3.4e-20 101.7 61 75.4
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 3.2e-18 95.1 65 70.8
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 2.1e-17 92.4 63 69.8
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 3.6e-17 91.7 59 72.9
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 3.0e-16 88.6 49 81.6
MELO3C030616.2 Cucumis melo HOM05D005210 ORTHO05D010286 3.1e-13 78.6 53 67.9
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 4.1e-13 78.2 45 80.0
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 4.5e-12 74.7 41 82.9
LjContig00439g0018526 Lotus japonicus HOM05D005210 ORTHO05D010286 4.5e-12 74.7 64 59.4
Phvul.011G104800 Phaseolus vulgaris HOM05D005210 ORTHO05D010286 2.2e-11 72.4 49 69.4
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 1.9e-10 69.3 93 44.1
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-06 56.2 30 83.3
Peaxi162Scf01120g00002 Petunia axillaris HOM05D008814 ORTHO05D010812 4.8e-06 54.7 30 83.3


User provided reference genes

Program Settings