Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009666g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 9.7e-164 580.1 297 100.0
Nitab4.5_0001453g0080 Nicotiana tabacum HOM05D011877 ORTHO05D010553 1.2e-137 493.4 296 88.9
Peaxi162Scf00789g00061 Petunia axillaris HOM05D011877 ORTHO05D010553 3.1e-69 266.2 297 57.6
Nitab4.5_0003082g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 3.5e-44 183.0 303 42.9
Nitab4.5_0002729g0010 Nicotiana tabacum HOM05D011877 ORTHO05D010553 1.6e-41 174.1 300 41.7
Solyc06g074550.3 Solanum lycopersicum HOM05D011877 ORTHO05D010553 4.5e-36 156.0 283 42.8
PGSC0003DMG400007124 Solanum tuberosum HOM05D011877 ORTHO05D010553 4.5e-36 156.0 277 43.7
Sopen06g031020 Solanum pennellii HOM05D011877 ORTHO05D010553 1.0e-35 154.8 275 43.6
Dinv12524 Davidia involucrata HOM05D011404 ORTHO05D010553 3.9e-19 99.8 327 33.9
Lsat_1_v5_gn_1_61941 Lactuca sativa HOM05D011877 ORTHO05D010553 4.7e-17 92.8 257 35.4
Potri.004G188300 Populus trichocarpa HOM05D011404 ORTHO05D010553 5.2e-16 89.4 316 32.9
Oeu050181.1 Olea europaea HOM05D011877 ORTHO05D010553 8.9e-16 88.6 252 34.5
Manes.11G157000 Manihot esculenta HOM05D011404 ORTHO05D010553 2.0e-15 87.4 292 31.2
Manes.04G008500 Manihot esculenta HOM05D011404 ORTHO05D010553 2.6e-15 87.0 252 33.7
TAR633G2541 Trochodendron aralioides HOM05D011404 ORTHO05D010553 4.4e-15 86.3 358 30.2
Haze_23449 Corylus avellana HOM05D011404 ORTHO05D010553 8.3e-14 82.0 276 29.7
Lsat_1_v5_gn_2_96940 Lactuca sativa HOM05D011877 ORTHO05D010553 8.3e-14 82.0 257 32.3
Cfa010082 Carpinus fangiana HOM05D011404 ORTHO05D010553 1.1e-13 81.6 281 29.9
Potri.009G149000 Populus trichocarpa HOM05D011404 ORTHO05D010553 5.4e-13 79.3 317 29.3
Sabra09G0117600 Salix brachista HOM05D011404 ORTHO05D010553 1.6e-12 77.8 316 28.8
Lj3g0007201 Lotus japonicus HOM05D011197 ORTHO05D010553 6.0e-12 75.9 265 31.3
Nn6g35047 Nelumbo nucifera HOM05D011404 ORTHO05D010553 6.0e-12 75.9 129 39.5
Nn2g13996 Nelumbo nucifera HOM05D011404 ORTHO05D010553 7.8e-12 75.5 130 39.2
MELO3C021450.2 Cucumis melo HOM05D024769 ORTHO05D010553 1.7e-11 74.3 313 28.4
CsaV3_6G014740 Cucumis sativus L. HOM05D024769 ORTHO05D010553 1.7e-11 74.3 314 28.3
TAR623G0178 Trochodendron aralioides HOM05D011404 ORTHO05D010553 1.7e-11 74.3 118 42.4
Sabra04G0127300 Salix brachista HOM05D011404 ORTHO05D010553 3.9e-11 73.2 309 32.0
Ca_19372_v3 Cicer arietinum L. HOM05D011197 ORTHO05D010553 8.6e-11 72.0 262 30.9
Lj2P994T14 Lonicera japonica HOM05D011877 ORTHO05D010553 1.5e-10 71.2 307 31.6
Sc12g0004150 Simmondsia chinensis HOM05D011877 ORTHO05D010553 2.5e-10 70.5 270 28.1
ClCG02G021920 Citrullus lanatus HOM05D024769 ORTHO05D010553 7.3e-10 68.9 329 27.7
Thecc.09G291600 Theobroma cacao HOM05D011197 ORTHO05D010553 7.3e-10 68.9 234 32.1
HanXRQChr14g0451971 Helianthus annuus HOM05D011877 ORTHO05D010553 1.2e-09 68.2 107 42.1
Phvul.011G090200 Phaseolus vulgaris HOM05D011197 ORTHO05D010553 1.2e-09 68.2 258 29.1
VMungo1127G2265 Vigna mungo HOM05D011197 ORTHO05D010553 2.1e-09 67.4 252 28.2
Nitab4.5_0003082g0030 Nicotiana tabacum HOM05D011877 ORTHO05D010553 6.2e-09 65.9 65 56.9
ATR0820G036 Amborella trichopoda HOM05D024769 ORTHO05D010553 4.0e-08 63.2 97 41.2
COL.COLO4_19296 Corchorus olitorius HOM05D011197 ORTHO05D010553 6.8e-08 62.4 260 32.3
Gohir.D05G086600 Gossypium hirsutum HOM05D011197 ORTHO05D010553 3.4e-07 60.1 250 28.0
TPR.G15575 Trifolium pratense HOM05D011197 ORTHO05D010553 3.4e-07 60.1 256 26.6
Gohir.A05G083700 Gossypium hirsutum HOM05D011197 ORTHO05D010553 4.4e-07 59.7 237 30.0
Eucgr.J00427 Eucalyptus grandis HOM05D024769 ORTHO05D010553 1.3e-06 58.2 294 26.5
Glyma.11G189250 Glycine max HOM05D011197 ORTHO05D010553 1.3e-06 58.2 257 30.0
QL01p013727 Quercus lobata HOM05D011404 ORTHO05D010553 1.3e-06 58.2 341 29.0
Gorai.009G088300 Gossypium raimondii HOM05D011197 ORTHO05D010553 1.7e-06 57.8 250 28.0
Glyma.12G085100 Glycine max HOM05D011197 ORTHO05D010553 2.2e-06 57.4 150 34.7


User provided reference genes

Program Settings