Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009643g0010 Nicotiana tabacum HOM05D008518 ORTHO05D010253 8.1e-129 463.8 236 100.0
Nitab4.5_0007303g0080 Nicotiana tabacum HOM05D008518 ORTHO05D010253 5.1e-75 285.0 235 63.0
Nitab4.5_0006770g0070 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.0e-43 181.0 177 61.0
Peaxi162Scf00035g00163 Petunia axillaris HOM05D008518 ORTHO05D010253 1.8e-43 180.3 229 48.5
Nitab4.5_0006102g0040 Nicotiana tabacum HOM05D000045 ORTHO05D010253 5.7e-42 175.3 174 57.5
Nitab4.5_0000839g0020 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.2e-39 167.5 155 63.2
Nitab4.5_0005347g0050 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.8e-32 143.7 235 41.7
Nitab4.5_0017387g0010 Nicotiana tabacum HOM05D008518 ORTHO05D010253 2.3e-30 136.7 79 78.5
Nitab4.5_0000091g0310 Nicotiana tabacum HOM05D008518 ORTHO05D010253 5.0e-30 135.6 204 44.6
Peaxi162Scf01343g00153 Petunia axillaris HOM05D008518 ORTHO05D010253 8.6e-30 134.8 229 40.2
Solyc03g044700.1 Solanum lycopersicum HOM05D008518 ORTHO05D010253 9.5e-29 131.3 79 75.9
CAN.G823.11 Capsicum annuum HOM05D000045 ORTHO05D011407 6.2e-28 128.6 252 34.1
Nitab4.5_0007280g0040 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.8e-27 127.1 70 85.7
CAN.G936.4 Capsicum annuum HOM05D008518 ORTHO05D010253 1.2e-26 124.4 230 36.1
Peaxi162Scf00148g00123 Petunia axillaris HOM05D000045 ORTHO05D010253 1.5e-26 124.0 74 81.1
Nitab4.5_0000759g0030 Nicotiana tabacum HOM05D008518 ORTHO05D010253 3.4e-26 122.9 148 49.3
Peaxi162Scf00186g01113 Petunia axillaris HOM05D008518 ORTHO05D010253 1.1e-24 117.9 230 36.5
Nitab4.5_0007280g0050 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.9e-24 117.1 67 85.1
CAN.G531.14 Capsicum annuum HOM05D008518 ORTHO05D010253 5.4e-24 115.5 75 70.7
Nitab4.5_0006102g0030 Nicotiana tabacum HOM05D008518 ORTHO05D010253 7.0e-24 115.2 77 74.0
Solyc07g064430.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.0e-23 113.6 74 70.3
CAN.G517.13 Capsicum annuum HOM05D000045 ORTHO05D011407 2.7e-23 113.2 79 64.6
TWI63G0536 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.0e-22 111.3 92 59.8
CAN.G474.1 Capsicum annuum HOM05D000045 ORTHO05D000067 3.0e-22 109.8 77 68.8
Nitab4.5_0004722g0020 Nicotiana tabacum HOM05D008518 ORTHO05D010253 5.0e-22 109.0 113 54.0
Eucgr.B01589 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.3e-21 106.3 96 55.2
Peaxi162Scf00193g00712 Petunia axillaris HOM05D008518 ORTHO05D010253 3.3e-21 106.3 230 33.5
TWI74G1582 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.3e-21 105.1 92 56.5
Solyc03g044690.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.6e-20 104.0 113 49.6
Dinv12602 Davidia involucrata HOM05D012663 ORTHO05D011407 2.8e-20 103.2 91 58.2
Eucgr.E01219 Eucalyptus grandis HOM05D000045 ORTHO05D000067 6.2e-20 102.1 90 56.7
Eucgr.I00824 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.1e-19 101.3 90 55.6
PGR102G2569 Punica granatum HOM05D000045 ORTHO05D000067 1.1e-19 101.3 83 59.0
Eucgr.H01407 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.4e-19 100.9 91 54.9
CAN.G402.1 Capsicum annuum HOM05D008518 ORTHO05D010253 1.8e-19 100.5 75 62.7
Solyc05g014900.1 Solanum lycopersicum HOM05D008518 ORTHO05D010253 1.2e-18 97.8 79 59.5
Solyc03g063530.1 Solanum lycopersicum HOM05D008518 ORTHO05D010253 2.0e-18 97.1 67 65.7
Peaxi162Scf00044g00179 Petunia axillaris HOM05D008518 ORTHO05D010253 4.4e-18 95.9 228 33.8
CAN.G108.51 Capsicum annuum HOM05D000045 ORTHO05D011407 9.8e-18 94.7 234 29.1
QL06p052677 Quercus lobata HOM05D000045 ORTHO05D000067 2.9e-17 93.2 82 54.9
COL.COLO4_15687 Corchorus olitorius HOM05D000045 ORTHO05D010736 3.7e-17 92.8 214 29.9
Eucgr.B01259 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.7e-17 92.8 90 52.2
QL02p051760 Quercus lobata HOM05D000045 ORTHO05D000067 4.9e-17 92.4 83 53.0
QL06p053907 Quercus lobata HOM05D000045 ORTHO05D011407 1.1e-16 91.3 82 53.7
Eucgr.C01167 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.9e-16 90.5 91 49.5
Nitab4.5_0000541g0080 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.9e-16 90.5 51 82.4
Eucgr.B00042 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.2e-16 89.7 91 49.5
Peaxi162Scf00057g00055 Petunia axillaris HOM05D008518 ORTHO05D010253 3.2e-16 89.7 229 29.7
Eucgr.E02501 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.2e-15 87.8 90 48.9
FvH4_6g38410 Fragaria vesca HOM05D000122 ORTHO05D000067 1.2e-15 87.8 182 31.9
FvH4_4g10602 Fragaria vesca HOM05D000045 ORTHO05D017020 1.6e-15 87.4 195 32.3
Prupe.2G147900 Prunus persica HOM05D000045 ORTHO05D000067 1.6e-15 87.4 84 51.2
Prupe.6G011300 Prunus persica HOM05D000045 ORTHO05D000067 1.6e-15 87.4 84 51.2
PGR042G2838 Punica granatum HOM05D000045 ORTHO05D011407 3.5e-15 86.3 92 46.7
Peaxi162Scf00300g00029 Petunia axillaris HOM05D008518 ORTHO05D010253 4.6e-15 85.9 230 30.9
TWI31G1385 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 4.6e-15 85.9 260 25.8
TWI74G1604 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 4.6e-15 85.9 260 25.8
Eucgr.E02037 Eucalyptus grandis HOM05D000045 ORTHO05D000067 7.8e-15 85.1 90 46.7
Eucgr.G01680 Eucalyptus grandis HOM05D000045 ORTHO05D000067 7.8e-15 85.1 90 46.7
Peaxi162Scf00109g00015 Petunia axillaris HOM05D008518 ORTHO05D010253 1.0e-14 84.7 90 54.4
Nitab4.5_0003811g0050 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.3e-14 84.3 54 75.9
Peaxi162Scf00703g00234 Petunia axillaris HOM05D008518 ORTHO05D010253 3.0e-14 83.2 46 78.3
Eucgr.J01116 Eucalyptus grandis HOM05D000045 ORTHO05D000067 8.6e-14 81.6 84 44.0
Eucgr.C01967 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.5e-13 80.9 59 64.4
Ah.10g036100 Amaranthus hybridus HOM05D000045 ORTHO05D000067 7.3e-13 78.6 90 47.8
Peaxi162Scf00194g00110 Petunia axillaris HOM05D008518 ORTHO05D010253 7.3e-13 78.6 46 76.1
Ah.13g067370 Amaranthus hybridus HOM05D000045 ORTHO05D000067 1.2e-12 77.8 90 44.4
QL93p0049_0121 Quercus lobata HOM05D000045 ORTHO05D000067 1.2e-12 77.8 85 48.2
Prupe.5G053800 Prunus persica HOM05D000045 ORTHO05D000067 1.6e-12 77.4 83 49.4
MBI19_g20574_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 2.1e-12 77.0 182 29.7
TWI63G0656 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.7e-12 75.9 74 44.6
Atru.chr1.809 Acer truncatum HOM05D000045 ORTHO05D000067 8.1e-12 75.1 85 45.9
Atru.chr9.622 Acer truncatum HOM05D000045 ORTHO05D000067 8.1e-12 75.1 91 45.1
Eucgr.E02845 Eucalyptus grandis HOM05D000045 ORTHO05D011407 8.1e-12 75.1 84 46.4
TWI74G0276 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 5.2e-11 72.4 74 43.2
MBI12_g23370_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 8.9e-11 71.6 182 29.7
Peaxi162Scf00056g00204 Petunia axillaris HOM05D008518 ORTHO05D010253 8.9e-11 71.6 70 58.6
FvH4_3g38531 Fragaria vesca HOM05D000045 ORTHO05D000067 1.5e-10 70.9 115 33.0
QL05p056997 Quercus lobata HOM05D000045 ORTHO05D000067 4.4e-10 69.3 120 35.8
QL04p022188 Quercus lobata HOM05D000045 ORTHO05D000067 7.6e-10 68.6 148 31.1
RcHm_v2.0_Chr7g0187081 Rosa chinensis HOM05D000045 ORTHO05D000067 7.6e-10 68.6 130 33.8
Atru.chr6.1103 Acer truncatum HOM05D000045 ORTHO05D000067 1.3e-09 67.8 119 35.3
TPR.G29744 Trifolium pratense HOM05D000045 ORTHO05D000067 1.7e-09 67.4 106 36.8
MD02G1139600 Malus domestica HOM05D000045 ORTHO05D000067 2.2e-09 67.0 116 33.6
Peaxi162Scf00057g02122 Petunia axillaris HOM05D008518 ORTHO05D010253 3.7e-09 66.2 45 66.7
QL02p025436 Quercus lobata HOM05D000045 ORTHO05D010253 3.7e-09 66.2 155 27.7
FvH4_2g28081 Fragaria vesca HOM05D000045 ORTHO05D019123 4.9e-09 65.9 106 36.8
MD15G1252700 Malus domestica HOM05D000045 ORTHO05D000067 4.9e-09 65.9 159 28.9
Prupe.1G223100 Prunus persica HOM05D000045 ORTHO05D000067 4.9e-09 65.9 122 35.2
Prupe.7G161400 Prunus persica HOM05D000045 ORTHO05D000067 6.4e-09 65.5 158 28.5
RcHm_v2.0_Chr2g0100471 Rosa chinensis HOM05D000045 ORTHO05D000067 6.4e-09 65.5 114 34.2
Rhsim10G0133400 Rhododendron simsii HOM05D000045 ORTHO05D009425 8.4e-09 65.1 165 28.5
Prupe.7G161500 Prunus persica HOM05D000045 ORTHO05D000067 1.1e-08 64.7 120 34.2
QL05p023929 Quercus lobata HOM05D064382 ORTHO05D011407 1.9e-08 63.9 77 48.1
EL10Ac8g19665 Beta vulgaris HOM05D000045 ORTHO05D000067 3.2e-08 63.2 83 42.2
COL.COLO4_36684 Corchorus olitorius HOM05D000045 ORTHO05D000611 4.1e-08 62.8 215 24.7
Peaxi162Scf00276g00001 Petunia axillaris HOM05D008518 ORTHO05D010253 7.1e-08 62.0 62 53.2
FvH4_3g27581 Fragaria vesca HOM05D000045 ORTHO05D000067 9.2e-08 61.6 90 37.8
Ah.10g026000 Amaranthus hybridus HOM05D000045 ORTHO05D000067 1.2e-07 61.2 83 41.0
Ah.13g067360 Amaranthus hybridus HOM05D000045 ORTHO05D010253 1.2e-07 61.2 71 39.4
FvH4_5g39268 Fragaria vesca HOM05D000147 ORTHO05D019123 1.2e-07 61.2 70 41.4
FvH4_4g15809 Fragaria vesca HOM05D000045 ORTHO05D000067 1.6e-07 60.8 101 35.6
Hma1.2p1_0552F.1_g177720 Hydrangea macrophylla HOM05D012663 ORTHO05D011407 2.1e-07 60.5 55 49.1
Ah.09g224920 Amaranthus hybridus HOM05D000045 ORTHO05D000067 2.7e-07 60.1 83 39.8
FvH4_4g15802 Fragaria vesca HOM05D000045 ORTHO05D000067 2.7e-07 60.1 107 33.6
TPR.G12781 Trifolium pratense HOM05D000045 ORTHO05D000067 2.7e-07 60.1 94 37.2
Atru.chr10.181 Acer truncatum HOM05D000045 ORTHO05D012015 3.5e-07 59.7 68 42.6
Rhsim13G0135900 Rhododendron simsii HOM05D000045 ORTHO05D009425 3.5e-07 59.7 208 26.9
FvH4_1g12531 Fragaria vesca HOM05D000045 ORTHO05D000067 6.0e-07 58.9 100 34.0
Prupe.2G091000 Prunus persica HOM05D000045 ORTHO05D000067 6.0e-07 58.9 90 37.8
Prupe.4G246500 Prunus persica HOM05D000045 ORTHO05D000067 6.0e-07 58.9 90 37.8
Prupe.5G036100 Prunus persica HOM05D000045 ORTHO05D000067 6.0e-07 58.9 90 37.8
Atru.chr11.2219 Acer truncatum HOM05D000045 ORTHO05D000067 7.8e-07 58.5 100 35.0
MBI19_g45010_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 1.0e-06 58.2 93 34.4
TAR633G0535 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.0e-06 58.2 124 30.6
Eucgr.I00733 Eucalyptus grandis HOM05D000045 ORTHO05D010253 1.3e-06 57.8 68 38.2
FvH4_1g19192 Fragaria vesca HOM05D000045 ORTHO05D019123 1.3e-06 57.8 101 34.7
FvH4_1g22662 Fragaria vesca HOM05D000045 ORTHO05D009425 1.3e-06 57.8 107 32.7
PSO063G1694 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-06 57.8 123 30.9
Rhsim07G0162500 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.3e-06 57.8 189 26.5
RcHm_v2.0_Chr2g0100481 Rosa chinensis HOM05D000045 ORTHO05D000067 1.3e-06 57.8 91 37.4
Eucgr.F00557 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.7e-06 57.4 165 29.7
Rhsim01G0020000 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.7e-06 57.4 107 31.8
Sed0007023 Sechium edule HOM05D000045 ORTHO05D000067 1.7e-06 57.4 118 31.4
AUR62033390 Chenopodium quinoa HOM05D000045 ORTHO05D011949 2.3e-06 57.0 83 38.6
Peaxi162Scf00198g00078 Petunia axillaris HOM05D008518 ORTHO05D010253 2.3e-06 57.0 62 50.0
PSO063G6921 Papaver somniferum HOM05D000045 ORTHO05D000067 3.0e-06 56.6 83 38.6
Ah.11g042450 Amaranthus hybridus HOM05D000045 ORTHO05D000067 3.9e-06 56.2 83 38.6
Ah.14g083490 Amaranthus hybridus HOM05D000045 ORTHO05D000067 3.9e-06 56.2 83 38.6
Os12g0160900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 3.9e-06 56.2 90 32.2
PSO111G0033 Papaver somniferum HOM05D000045 ORTHO05D009425 3.9e-06 56.2 86 40.7
Rhsim09G0008100 Rhododendron simsii HOM05D000045 ORTHO05D009425 3.9e-06 56.2 107 31.8
TPR.G9651 Trifolium pratense HOM05D000045 ORTHO05D000067 3.9e-06 56.2 170 28.8
Ah.12g062020 Amaranthus hybridus HOM05D000045 ORTHO05D000067 5.1e-06 55.8 83 38.6
Eucgr.C03166 Eucalyptus grandis HOM05D000045 ORTHO05D010253 5.1e-06 55.8 70 35.7
FvH4_2g07051 Fragaria vesca HOM05D000045 ORTHO05D010253 5.1e-06 55.8 87 33.3
Rhsim01G0165200 Rhododendron simsii HOM05D000045 ORTHO05D010736 5.1e-06 55.8 70 38.6
Rhsim03G0133600 Rhododendron simsii HOM05D000045 ORTHO05D009425 5.1e-06 55.8 120 30.8
Rhsim04G0143500 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.1e-06 55.8 87 31.0
PSO478G3462 Papaver somniferum HOM05D000045 ORTHO05D000067 6.6e-06 55.5 98 31.6
Ah.03g144600 Amaranthus hybridus HOM05D000045 ORTHO05D000067 8.6e-06 55.1 83 37.3
Ah.07g201570 Amaranthus hybridus HOM05D000045 ORTHO05D000067 8.6e-06 55.1 83 37.3
AUR62006830 Chenopodium quinoa HOM05D000045 ORTHO05D000067 8.6e-06 55.1 83 37.3
AUR62035717 Chenopodium quinoa HOM05D000045 ORTHO05D000067 8.6e-06 55.1 83 37.3
AUR62044419 Chenopodium quinoa HOM05D000045 ORTHO05D000067 8.6e-06 55.1 83 37.3
Thhalv10021958m.g Eutrema salsugineum HOM05D000045 ORTHO05D000067 8.6e-06 55.1 112 33.9
Rhsim04G0143000 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.6e-06 55.1 73 42.5


User provided reference genes

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