Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 2.4e-62 241.9 115 100.0
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 7.3e-51 203.8 100 97.0
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 7.3e-51 203.8 100 97.0
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 1.3e-50 203.0 100 97.0
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 4.8e-50 201.1 116 82.8
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 4.0e-49 198.0 110 86.4
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 2.0e-48 195.7 99 92.9
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 5.8e-48 194.1 104 84.6
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 5.8e-48 194.1 100 90.0
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 7.6e-48 193.7 99 90.9
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 7.6e-48 193.7 100 91.0
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 1.7e-47 192.6 99 89.9
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.9e-47 191.0 100 88.0
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.9e-47 191.0 100 88.0
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 4.9e-47 191.0 100 89.0
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 6.4e-47 190.7 100 87.0
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 8.4e-47 190.3 100 87.0
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 8.4e-47 190.3 91 100.0
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 8.4e-47 190.3 91 100.0
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.4e-46 189.5 99 90.9
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 5.4e-46 187.6 99 89.9
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 5.4e-46 187.6 99 89.9
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 5.4e-46 187.6 99 89.9
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 5.4e-46 187.6 100 86.0
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 7.1e-46 187.2 100 87.0
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 9.3e-46 186.8 103 83.5
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 9.3e-46 186.8 100 84.0
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 9.3e-46 186.8 100 87.0
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 9.3e-46 186.8 100 87.0
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 9.3e-46 186.8 100 87.0
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 1.2e-45 186.4 100 90.0
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.2e-45 186.4 100 89.0
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.6e-45 186.0 100 88.0
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 2.1e-45 185.7 103 82.5
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 2.1e-45 185.7 100 86.0
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 2.7e-45 185.3 100 85.0
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 4.6e-45 184.5 100 84.0
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 4.6e-45 184.5 99 86.9
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 7.9e-45 183.7 99 84.8
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 1.0e-44 183.3 114 75.4
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.0e-44 183.3 100 86.0
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 1.0e-44 183.3 100 85.0
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 1.0e-44 183.3 99 83.8
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 1.3e-44 183.0 99 86.9
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.3e-44 183.0 103 81.6
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 1.7e-44 182.6 114 75.4
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 1.7e-44 182.6 100 84.0
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 1.7e-44 182.6 100 84.0
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 2.3e-44 182.2 99 83.8
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.3e-44 182.2 100 85.0
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 2.3e-44 182.2 100 82.0
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 2.3e-44 182.2 100 84.0
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 3.0e-44 181.8 100 87.0
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 3.0e-44 181.8 100 87.0
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 5.1e-44 181.0 100 85.0
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 5.1e-44 181.0 100 85.0
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 6.6e-44 180.6 110 79.1
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 8.7e-44 180.3 114 73.7
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 8.7e-44 180.3 114 73.7
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 8.7e-44 180.3 114 73.7
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 8.7e-44 180.3 100 84.0
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 1.1e-43 179.9 114 73.7
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 1.1e-43 179.9 100 83.0
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 1.5e-43 179.5 99 82.8
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.5e-43 179.5 105 81.9
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 1.9e-43 179.1 100 84.0
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.9e-43 179.1 100 83.0
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 2.5e-43 178.7 114 72.8
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 4.3e-43 177.9 100 82.0
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 4.3e-43 177.9 100 83.0
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 5.6e-43 177.6 114 71.9
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 5.6e-43 177.6 100 81.0
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 9.6e-43 176.8 100 82.0
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 9.6e-43 176.8 99 81.8
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 9.6e-43 176.8 100 85.0
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 1.3e-42 176.4 99 80.8
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 1.3e-42 176.4 100 83.0
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 1.3e-42 176.4 100 85.0
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 1.3e-42 176.4 100 86.0
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 1.6e-42 176.0 94 90.4
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 2.1e-42 175.6 99 81.8
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.8e-42 175.3 100 80.0
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 2.8e-42 175.3 100 82.0
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 4.8e-42 174.5 100 82.0
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 4.8e-42 174.5 98 81.6
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 6.2e-42 174.1 100 82.0
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 8.1e-42 173.7 100 81.0
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 8.1e-42 173.7 103 77.7
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.1e-41 173.3 100 78.0
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.1e-41 173.3 100 78.0
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 1.4e-41 172.9 100 81.0
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 1.4e-41 172.9 100 79.0
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 1.4e-41 172.9 100 81.0
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 2.4e-41 172.2 100 81.0
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 2.4e-41 172.2 100 82.0
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 3.1e-41 171.8 100 78.0
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 9.9e-40 166.8 100 76.0
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 1.7e-39 166.0 99 79.8
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.3e-36 156.4 100 73.0
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 1.3e-34 149.8 99 69.7
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.4e-33 145.6 75 88.0
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 5.3e-33 144.4 102 66.7
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 6.9e-33 144.1 99 67.7
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 5.8e-32 141.0 77 84.4
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.4e-30 136.3 104 66.3
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 1.9e-30 136.0 99 62.6
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 4.2e-30 134.8 100 68.0
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 5.5e-30 134.4 99 63.6
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.6e-29 132.9 85 72.9
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 3.0e-28 128.6 111 59.5
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.5e-27 126.3 67 88.1
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 1.9e-27 125.9 66 93.9
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 4.5e-24 114.8 115 47.8
MBI11_g30564_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.9e-20 101.7 59 83.1
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 3.1e-17 92.0 102 47.1
MBI03_g14783_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.1e-17 92.0 69 62.3
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 3.4e-16 88.6 104 40.4
MBI07_g28641_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 2.1e-13 79.3 51 72.5


User provided reference genes

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