Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009611g0040 Nicotiana tabacum HOM05D000405 ORTHO05D000712 2.4e-102 375.6 195 100.0
Nitab4.5_0000381g0130 Nicotiana tabacum HOM05D000405 ORTHO05D000712 2.2e-63 246.1 230 64.8
PGSC0003DMG400008391 Solanum tuberosum HOM05D000405 ORTHO05D000712 1.1e-25 120.9 220 46.4
Peaxi162Scf00732g00236 Petunia axillaris HOM05D000405 ORTHO05D000712 1.3e-23 114.0 214 39.7
Nitab4.5_0000048g0080 Nicotiana tabacum HOM05D000405 ORTHO05D000712 3.8e-23 112.5 200 39.5
CAN.G1018.1 Capsicum annuum HOM05D000405 ORTHO05D000712 6.0e-21 105.1 117 58.1
Nitab4.5_0002758g0040 Nicotiana tabacum HOM05D000405 ORTHO05D000712 1.0e-20 104.4 194 39.7
PGSC0003DMG400029207 Solanum tuberosum HOM05D000405 ORTHO05D000712 1.8e-20 103.6 216 38.0
Peaxi162Scf02233g00008 Petunia axillaris HOM05D000405 ORTHO05D000712 3.3e-19 99.4 225 38.2
Peaxi162Scf00374g00006 Petunia axillaris HOM05D000405 ORTHO05D000712 2.1e-18 96.7 219 37.4
Sopen09g009930 Solanum pennellii HOM05D000405 ORTHO05D000712 8.1e-18 94.7 208 37.5
Solyc09g015770.3 Solanum lycopersicum HOM05D000405 ORTHO05D000712 5.8e-16 88.6 220 35.0
CAN.G1050.2 Capsicum annuum HOM05D000405 ORTHO05D000712 7.6e-16 88.2 207 34.8
Dinv25351 Davidia involucrata HOM05D000405 ORTHO05D000712 5.5e-14 82.0 134 41.0
COL.COLO4_37425 Corchorus olitorius HOM05D000405 ORTHO05D000712 3.0e-12 76.3 199 32.7
Potri.006G109100 Populus trichocarpa HOM05D000405 ORTHO05D000712 1.5e-11 73.9 231 30.7
Thecc.04G150600 Theobroma cacao HOM05D000405 ORTHO05D000712 1.9e-11 73.6 207 33.8
Dinv16971 Davidia involucrata HOM05D000405 ORTHO05D000712 9.6e-11 71.2 138 41.3
Migut.J00031 Erythranthe guttata HOM05D000405 ORTHO05D000712 2.8e-10 69.7 164 33.5
Lj2C58G9 Lonicera japonica HOM05D000405 ORTHO05D000712 4.8e-10 68.9 153 34.6
Duzib151G1206 Durio zibethinus HOM05D000405 ORTHO05D000712 1.8e-09 67.0 203 34.0
Sabra04G0154100 Salix brachista HOM05D000405 ORTHO05D000712 1.8e-09 67.0 222 29.7
Ciclev10012055m.g Citrus clementina HOM05D000405 ORTHO05D000712 2.4e-09 66.6 217 30.4
SalBow5G0404 Salvia bowleyana HOM05D000405 ORTHO05D000712 2.4e-09 66.6 187 28.9
SalBow5G5053 Salvia bowleyana HOM05D000405 ORTHO05D000712 2.4e-09 66.6 187 28.9
Oeu007829.1 Olea europaea HOM05D000405 ORTHO05D000712 4.0e-09 65.9 123 41.5
Duzib212G0775 Durio zibethinus HOM05D000405 ORTHO05D000712 5.3e-09 65.5 219 32.4
Manes.09G123700 Manihot esculenta HOM05D000405 ORTHO05D000712 5.3e-09 65.5 222 29.7
Oeu063847.1 Olea europaea HOM05D000405 ORTHO05D000712 6.9e-09 65.1 132 35.6
ECA247G3523 Erigeron canadensis HOM05D000405 ORTHO05D000712 1.2e-08 64.3 209 29.2
Oeu064866.1 Olea europaea HOM05D000405 ORTHO05D000712 1.5e-08 63.9 125 38.4
Nitab4.5_0001215g0230 Nicotiana tabacum HOM05D000405 ORTHO05D000712 2.0e-08 63.5 181 33.7
Actinidia11503 Actinidia chinensis HOM05D000405 ORTHO05D000712 2.6e-08 63.2 196 28.6
vmacro20375 Vaccinium macrocarpon HOM05D000405 ORTHO05D000712 2.6e-08 63.2 214 31.8
ClCG10G022810 Citrullus lanatus HOM05D000405 ORTHO05D000712 3.4e-08 62.8 126 36.5
Cfa017018 Carpinus fangiana HOM05D000405 ORTHO05D000712 5.8e-08 62.0 225 30.2
Sed0015345 Sechium edule HOM05D000405 ORTHO05D000712 5.8e-08 62.0 200 32.5
SGA_v2.0_scaffold85G26603 Striga asiatica HOM05D000405 ORTHO05D000712 5.8e-08 62.0 168 31.0
Actinidia29029 Actinidia chinensis HOM05D000405 ORTHO05D000712 7.6e-08 61.6 186 29.0
CiPaw.09G222100 Carya illinoinensis HOM05D000405 ORTHO05D000712 1.3e-07 60.8 215 30.2
Lsat_1_v5_gn_9_39460 Lactuca sativa HOM05D000405 ORTHO05D000712 1.7e-07 60.5 215 28.4
Haze_21185 Corylus avellana HOM05D000405 ORTHO05D000712 2.2e-07 60.1 225 29.8
Manes.08G170600 Manihot esculenta HOM05D000405 ORTHO05D000712 2.2e-07 60.1 137 34.3
TAR623G1448 Trochodendron aralioides HOM05D000405 ORTHO05D000712 2.2e-07 60.1 189 29.1
vmacro20376 Vaccinium macrocarpon HOM05D000405 ORTHO05D000712 2.2e-07 60.1 136 32.4
Medtr7g073430 Medicago truncatula HOM05D000405 ORTHO05D000712 2.9e-07 59.7 208 29.3
Duzib268G1856 Durio zibethinus HOM05D000405 ORTHO05D000712 3.8e-07 59.3 223 29.6
MELO3C009097.2 Cucumis melo HOM05D000405 ORTHO05D000712 6.5e-07 58.5 212 30.2
Dinv34496 Davidia involucrata HOM05D000405 ORTHO05D000712 6.5e-07 58.5 136 35.3
CSS0023134 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000712 1.1e-06 57.8 193 29.5
CSS0024910 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000712 1.1e-06 57.8 136 36.0
CSS0040110 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000712 1.1e-06 57.8 136 36.0
Potri.016G137900 Populus trichocarpa HOM05D000405 ORTHO05D000712 1.1e-06 57.8 213 28.2
CSS0005560 Camellia sinensis var. sinensis HOM05D000405 ORTHO05D000712 1.9e-06 57.0 193 29.5
Lalb_Chr03g0043901 Lupinus albus HOM05D000405 ORTHO05D000712 2.5e-06 56.6 109 36.7
Oeu018745.1 Olea europaea HOM05D000405 ORTHO05D000712 2.5e-06 56.6 117 35.0
Oeu018746.1 Olea europaea HOM05D005345 ORTHO05D004682 2.5e-06 56.6 117 35.0
Sed0014138 Sechium edule HOM05D000405 ORTHO05D000712 2.5e-06 56.6 167 30.5
Rhsim05G0231500 Rhododendron simsii HOM05D000405 ORTHO05D000712 3.2e-06 56.2 188 28.7
Cpa.g.sc86.64 Carica papaya HOM05D000405 ORTHO05D000712 4.2e-06 55.8 141 29.8
Nn5g26832 Nelumbo nucifera HOM05D000405 ORTHO05D000712 5.5e-06 55.5 137 36.5
PGR004G1109 Punica granatum HOM05D000405 ORTHO05D000712 7.1e-06 55.1 123 36.6
QL07p031941 Quercus lobata HOM05D000405 ORTHO05D000712 7.1e-06 55.1 143 32.9
TAR633G1713 Trochodendron aralioides HOM05D000405 ORTHO05D000712 7.1e-06 55.1 137 37.2
TWI53G1110 Tripterygium wilfordii HOM05D000405 ORTHO05D000712 9.3e-06 54.7 131 36.6


User provided reference genes

Program Settings