Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 4.4e-195 684.5 356 100.0
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.7e-159 566.2 391 79.5
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.7e-130 469.9 362 73.5
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.4e-121 440.3 373 68.6
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.0e-119 434.1 372 67.7
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.8e-116 423.3 378 67.2
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.6e-83 313.9 233 70.8
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 9.4e-81 304.7 285 60.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 3.6e-80 302.8 321 54.5
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 6.1e-80 302.0 307 57.3
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 3.4e-78 296.2 337 52.5
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 7.5e-78 295.0 283 58.3
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 6.3e-77 292.0 370 50.5
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.1e-76 291.2 302 56.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.1e-76 291.2 359 50.7
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.1e-76 291.2 319 53.3
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.4e-76 290.8 358 50.3
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.8e-76 290.4 324 55.6
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 3.1e-76 289.7 246 63.4
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 7.0e-76 288.5 361 50.7
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.2e-75 287.7 404 47.5
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 2.0e-75 287.0 225 68.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.0e-74 284.6 301 55.8
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 1.0e-74 284.6 291 56.4
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.3e-74 284.3 231 64.9
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 2.3e-74 283.5 357 49.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 8.6e-74 281.6 236 65.3
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.6e-74 281.6 357 49.6
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 8.6e-74 281.6 289 57.1
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 1.5e-73 280.8 332 52.7
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 3.3e-73 279.6 266 58.3
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 4.7e-72 275.8 294 55.8
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.0e-71 274.6 357 48.2
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.0e-71 274.6 320 51.6
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.0e-71 274.6 247 60.3
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 5.2e-71 272.3 244 58.2
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-70 270.4 261 60.2
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.6e-70 270.0 293 54.6
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 4.4e-70 269.2 368 47.0
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 5.7e-70 268.9 247 60.7
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.5e-70 268.5 293 54.3
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.8e-70 268.1 261 59.8
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.8e-70 268.1 262 61.1
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 9.8e-70 268.1 293 53.9
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 9.8e-70 268.1 293 53.9
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 9.8e-70 268.1 235 62.6
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-69 267.3 232 62.5
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-69 267.3 232 62.1
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.7e-69 267.3 261 59.4
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.7e-69 267.3 250 59.2
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 2.2e-69 266.9 247 57.9
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.2e-69 266.9 271 57.9
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.2e-69 266.9 224 65.6
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 2.2e-69 266.9 364 47.8
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.9e-69 266.5 293 53.2
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 3.7e-69 266.2 248 56.9
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 6.4e-69 265.4 253 56.5
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.1e-68 264.6 311 51.4
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.4e-68 264.2 243 59.3
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 4.1e-68 262.7 251 59.4
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 7.0e-68 261.9 288 51.7
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 7.0e-68 261.9 325 49.5
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 3.5e-67 259.6 286 54.5
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 5.9e-67 258.8 230 60.4
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 7.8e-67 258.5 361 46.5
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 3.9e-66 256.1 235 60.0
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 6.6e-66 255.4 261 56.7
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.1e-65 254.6 265 53.6
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 7.3e-65 251.9 225 60.0
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 9.5e-65 251.5 252 54.0
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.6e-64 250.8 300 51.3
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 2.1e-64 250.4 221 60.2
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 4.0e-63 246.1 230 57.8
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 6.8e-63 245.4 272 52.6
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.2e-62 244.6 229 57.2
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.2e-62 244.6 184 68.5
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 9.8e-62 241.5 289 50.5
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.3e-61 241.1 182 66.5
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.3e-61 241.1 212 62.7
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 2.9e-61 240.0 193 65.8
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 2.9e-61 240.0 182 67.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 2.9e-61 240.0 237 56.5
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 2.4e-60 236.9 254 52.8
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.1e-60 236.1 260 53.1
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 7.0e-60 235.3 286 50.3
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 9.2e-60 235.0 182 64.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 9.2e-60 235.0 322 46.3
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 9.2e-60 235.0 260 52.7
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 7.8e-59 231.9 182 63.7
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 7.8e-59 231.9 182 63.7
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 5.0e-58 229.2 315 47.0
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 8.6e-58 228.4 231 55.0
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 8.6e-58 228.4 182 62.6
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 7.3e-57 225.3 168 68.5
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-56 223.4 211 59.7
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.4e-55 221.1 152 73.7
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.2e-53 213.8 315 39.7
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 6.6e-50 202.2 222 55.9
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 5.6e-49 199.1 187 57.8
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.5e-46 191.0 241 51.0
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 7.6e-46 188.7 246 50.4
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.9e-45 186.8 155 64.5
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 3.5e-43 179.9 303 43.2
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.7e-42 177.6 184 55.4
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.6e-35 154.5 180 52.2
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 7.8e-35 152.1 226 40.7
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.1e-33 148.3 101 75.2
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-32 143.7 195 47.2
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.2e-32 142.5 117 66.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.4e-31 140.6 257 40.5
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.7e-29 134.4 140 55.0
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 3.2e-28 130.2 120 59.2
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 4.8e-24 116.3 170 36.5
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 7.9e-19 99.0 220 31.4
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 2.3e-18 97.4 59 81.4
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.0e-13 82.0 55 76.4
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.1e-12 78.6 172 33.1
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 1.6e-08 64.7 52 59.6
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 5.3e-07 59.7 163 31.3
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.9e-07 59.3 148 35.1
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 9.0e-07 58.9 63 54.0
CDE06G0605 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.6e-06 57.4 185 28.1


User provided reference genes

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