Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.8e-68 261.9 143 100.0
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 9.1e-67 256.9 143 98.6
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.1e-35 151.8 89 93.3
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.0e-25 120.6 82 85.4
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.0e-25 120.6 82 85.4
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 3.3e-24 115.5 81 81.5
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 7.3e-24 114.4 82 80.5
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 1.2e-23 113.6 81 81.5
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 1.6e-23 113.2 84 76.2
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 2.1e-23 112.8 82 79.3
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 2.8e-23 112.5 81 80.2
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 3.6e-23 112.1 82 78.0
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 6.2e-23 111.3 84 75.0
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 6.2e-23 111.3 81 75.3
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 6.2e-23 111.3 82 75.6
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 6.2e-23 111.3 81 77.8
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 8.0e-23 110.9 81 77.8
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 1.1e-22 110.5 81 79.0
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 1.1e-22 110.5 81 75.3
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 1.1e-22 110.5 81 75.3
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 1.4e-22 110.2 81 76.5
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 1.8e-22 109.8 81 76.5
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 1.8e-22 109.8 81 76.5
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 1.8e-22 109.8 81 76.5
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.8e-22 109.8 81 75.3
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 1.8e-22 109.8 82 73.2
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 1.8e-22 109.8 81 77.8
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 2.3e-22 109.4 81 75.3
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 3.1e-22 109.0 81 77.8
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 3.1e-22 109.0 81 76.5
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 3.1e-22 109.0 81 75.3
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 3.1e-22 109.0 81 74.1
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 3.1e-22 109.0 83 75.9
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 3.1e-22 109.0 81 75.3
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 4.0e-22 108.6 81 76.5
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 4.0e-22 108.6 81 75.3
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 4.0e-22 108.6 81 76.5
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 4.0e-22 108.6 81 74.1
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 5.2e-22 108.2 81 76.5
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 5.2e-22 108.2 81 76.5
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 5.2e-22 108.2 82 75.6
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 5.2e-22 108.2 81 76.5
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 6.8e-22 107.8 81 76.5
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 6.8e-22 107.8 81 75.3
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 6.8e-22 107.8 80 75.0
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 8.9e-22 107.5 80 75.0
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 8.9e-22 107.5 82 73.2
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 8.9e-22 107.5 82 74.4
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 8.9e-22 107.5 81 74.1
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 8.9e-22 107.5 86 67.4
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.2e-21 107.1 81 72.8
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 1.2e-21 107.1 82 73.2
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.5e-21 106.7 80 76.2
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.5e-21 106.7 81 75.3
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 1.5e-21 106.7 81 72.8
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 1.5e-21 106.7 81 72.8
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 2.0e-21 106.3 81 76.5
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 2.0e-21 106.3 81 74.1
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.6e-21 105.9 82 72.0
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.6e-21 105.9 82 72.0
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 2.6e-21 105.9 81 75.3
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 3.4e-21 105.5 81 75.3
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 3.4e-21 105.5 81 71.6
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 3.4e-21 105.5 81 72.8
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 4.4e-21 105.1 82 72.0
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 4.4e-21 105.1 81 72.8
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 5.8e-21 104.8 81 72.8
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 7.5e-21 104.4 81 71.6
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 9.8e-21 104.0 82 73.2
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 9.8e-21 104.0 81 71.6
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 9.8e-21 104.0 81 72.8
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 1.3e-20 103.6 81 74.1
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 2.9e-20 102.4 83 72.3
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 2.9e-20 102.4 82 72.0
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 2.9e-20 102.4 81 71.6
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 3.7e-20 102.1 81 71.6
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 3.7e-20 102.1 80 71.2
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 4.9e-20 101.7 81 74.1
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.3e-20 100.9 81 71.6
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.3e-20 100.9 81 71.6
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.3e-20 100.9 81 71.6
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.3e-20 100.9 81 71.6
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 8.3e-20 100.9 83 71.1
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.4e-19 100.1 82 69.5
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 1.9e-19 99.8 81 70.4
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 3.2e-19 99.0 81 71.6
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 5.4e-19 98.2 82 69.5
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 7.0e-19 97.8 81 69.1
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 6.0e-18 94.7 83 65.1
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 7.8e-18 94.4 81 64.2
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 3.9e-17 92.0 68 75.0
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 3.9e-17 92.0 81 63.0
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 8.6e-17 90.9 80 66.2
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 3.3e-16 89.0 80 62.5
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 3.6e-15 85.5 79 62.0
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 5.2e-14 81.6 80 61.2
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 1.2e-13 80.5 84 59.5
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 3.4e-13 79.0 81 55.6
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 5.8e-13 78.2 55 74.5
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 3.7e-12 75.5 83 55.4
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 3.7e-12 75.5 83 55.4
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 3.7e-12 75.5 83 55.4
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 4.9e-12 75.1 85 51.8
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 1.1e-11 73.9 80 53.8
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 1.2e-10 70.5 89 51.7
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 6.0e-10 68.2 83 48.2
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 1.3e-09 67.0 85 48.2
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.0e-09 65.9 99 51.5
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 5.6e-08 61.6 81 44.4
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 1.2e-07 60.5 42 73.8
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.6e-07 60.1 80 50.0
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 4.7e-07 58.5 84 41.7
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 3.1e-06 55.8 82 45.1


User provided reference genes

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