Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.5e-74 282.7 138 100.0
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.3e-70 269.6 137 94.2
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.5e-69 264.2 138 92.0
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 7.2e-69 263.8 138 91.3
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.2e-65 252.3 138 89.1
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 7.9e-60 233.8 138 80.4
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.8e-59 232.6 136 80.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.1e-58 229.9 136 79.4
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.5e-58 229.6 136 76.5
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 5.7e-58 227.6 136 78.7
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 7.4e-58 227.3 136 78.7
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.7e-58 226.9 136 78.7
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 8.2e-57 223.8 135 77.0
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.1e-56 223.4 137 78.1
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.8e-56 222.6 136 75.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.8e-56 222.6 136 77.9
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.1e-56 221.5 137 76.6
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 5.3e-56 221.1 135 74.8
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 7.0e-56 220.7 136 75.7
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 9.1e-56 220.3 135 75.6
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 9.1e-56 220.3 133 75.2
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.2e-55 219.9 125 85.6
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 1.2e-55 219.9 125 85.6
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.6e-55 218.8 135 74.8
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.6e-55 218.8 135 74.8
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 3.5e-55 218.4 125 84.8
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.5e-55 218.4 136 77.9
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 7.7e-55 217.2 133 75.2
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.7e-54 216.1 141 73.0
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 2.2e-54 215.7 135 73.3
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.2e-54 215.7 137 74.5
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 2.9e-54 215.3 138 73.9
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.9e-54 215.3 138 71.7
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.9e-54 215.3 131 77.9
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 3.8e-54 214.9 132 75.0
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 3.8e-54 214.9 133 72.9
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.1e-53 213.4 135 72.6
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.1e-53 213.4 133 73.7
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 1.9e-53 212.6 136 73.5
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 7.2e-53 210.7 136 76.5
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 7.2e-53 210.7 138 71.0
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 7.2e-53 210.7 136 68.4
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 9.4e-53 210.3 141 71.6
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 9.4e-53 210.3 138 68.8
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.1e-52 209.1 136 75.0
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.7e-52 208.8 132 71.2
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.7e-52 208.8 133 71.4
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 3.6e-52 208.4 138 70.3
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.6e-52 208.4 135 72.6
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 6.1e-52 207.6 142 69.0
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 6.1e-52 207.6 118 82.2
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 8.0e-52 207.2 136 71.3
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 8.0e-52 207.2 133 72.9
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.0e-51 206.8 132 72.0
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.0e-51 206.8 132 72.0
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.8e-51 206.1 136 69.9
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.8e-51 206.1 136 66.9
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.8e-51 206.1 133 71.4
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 2.3e-51 205.7 141 70.2
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 3.0e-51 205.3 137 71.5
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 5.2e-51 204.5 141 69.5
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 6.7e-51 204.1 135 65.9
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 8.8e-51 203.8 118 80.5
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 8.8e-51 203.8 139 68.3
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 8.8e-51 203.8 139 68.3
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.1e-50 203.4 135 67.4
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.5e-50 203.0 136 72.8
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 2.0e-50 202.6 134 70.9
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.0e-50 202.6 137 70.8
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 7.4e-50 200.7 138 71.7
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 9.7e-50 200.3 133 69.9
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.3e-49 199.9 140 70.7
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.3e-49 199.9 136 67.6
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.7e-49 198.4 138 70.3
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.8e-49 198.0 127 71.7
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.8e-49 198.0 127 71.7
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 8.2e-49 197.2 139 67.6
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 3.1e-48 195.3 134 67.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 5.3e-48 194.5 137 65.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 7.0e-48 194.1 134 67.2
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.6e-47 192.2 117 76.1
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 2.6e-47 192.2 134 66.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 2.6e-47 192.2 134 66.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 2.6e-47 192.2 134 66.4
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 5.9e-47 191.0 114 77.2
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 7.7e-47 190.7 134 64.2
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 7.7e-47 190.7 134 65.7
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 7.7e-47 190.7 133 67.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.0e-46 190.3 136 66.2
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 1.0e-46 190.3 132 72.0
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.2e-46 189.1 134 65.7
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 2.9e-46 188.7 137 65.0
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.8e-46 188.3 139 65.5
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 5.0e-46 188.0 134 66.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 5.0e-46 188.0 106 80.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 5.0e-46 188.0 136 65.4
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 2.5e-45 185.7 137 65.0
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 2.5e-45 185.7 139 65.5
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.5e-45 185.7 136 64.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 7.2e-45 184.1 139 65.5
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.7e-44 182.2 116 72.4
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 3.6e-44 181.8 137 62.8
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 4.7e-44 181.4 140 62.1
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 6.1e-44 181.0 138 58.0
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.4e-43 179.9 142 61.3
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.3e-43 179.1 135 60.0
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 8.8e-43 177.2 134 64.2
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.0e-42 176.0 135 62.2
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 2.0e-42 176.0 116 70.7
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.3e-41 173.3 128 66.4
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.2e-41 172.6 111 71.2
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 2.2e-41 172.6 119 69.7
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 5.4e-40 167.9 111 68.5
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.6e-39 166.4 136 59.6
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 6.8e-35 151.0 122 54.9
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 8.8e-35 150.6 129 53.5
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.5e-34 149.8 125 52.0
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.6e-34 149.1 109 64.2
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.2e-33 146.0 122 54.9
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.8e-33 145.6 121 52.1
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.1e-32 143.7 121 52.1
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.8e-32 142.9 95 70.5
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 7.0e-32 141.0 89 71.9
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.7e-31 139.0 89 68.5
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.8e-30 135.2 81 74.1
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 3.6e-28 128.6 83 69.9
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 8.0e-28 127.5 87 67.8
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 4.9e-25 118.2 120 45.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.9e-25 118.2 90 64.4
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.2e-16 89.0 53 73.6
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.3e-14 82.8 87 52.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 2.3e-11 72.8 58 60.3


User provided reference genes

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