Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009585g0010 Nicotiana tabacum HOM05D003672 ORTHO05D004121 9.4e-212 740.0 382 100.0
Nitab4.5_0000231g0260 Nicotiana tabacum HOM05D003672 ORTHO05D004121 3.9e-141 505.4 375 76.0
Peaxi162Scf00175g00022 Petunia axillaris HOM05D003672 ORTHO05D004121 9.4e-111 404.4 411 62.3
Solyc05g012230.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 3.7e-91 339.3 409 55.0
Sopen05g007060 Solanum pennellii HOM05D003672 ORTHO05D004121 3.1e-90 336.3 393 56.7
PGSC0003DMG400028369 Solanum tuberosum HOM05D003672 ORTHO05D004121 6.0e-73 278.9 259 65.3
Dinv34068 Davidia involucrata HOM05D003672 ORTHO05D004121 7.9e-41 172.2 251 51.4
CSS0037619 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D004121 9.9e-36 155.2 234 49.1
Actinidia31938 Actinidia chinensis HOM05D003672 ORTHO05D004121 1.1e-34 151.8 250 46.0
TAR629G0952 Trochodendron aralioides HOM05D003672 ORTHO05D004121 3.9e-32 143.3 236 44.1
Dinv22781 Davidia involucrata HOM05D003672 ORTHO05D004121 1.1e-31 141.7 236 44.5
TAR629G1848 Trochodendron aralioides HOM05D003672 ORTHO05D004121 3.3e-31 140.2 236 43.6
Cc11_g11950 Coffea canephora HOM05D003672 ORTHO05D004121 5.6e-31 139.4 263 43.0
Duzib084G0362 Durio zibethinus HOM05D003672 ORTHO05D004121 1.3e-30 138.3 239 45.2
GSVIVG01012221001 Vitis vinifera HOM05D003672 ORTHO05D004121 2.1e-30 137.5 223 45.7
SalBow2G2767 Salvia bowleyana HOM05D003672 ORTHO05D004121 3.1e-29 133.7 457 31.9
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 4.0e-29 133.3 236 41.9
Peaxi162Scf00201g00329 Petunia axillaris HOM05D003672 ORTHO05D004121 5.8e-28 129.4 228 43.4
Thecc.03G101900 Theobroma cacao HOM05D003672 ORTHO05D004121 1.0e-27 128.6 236 42.8
Gohir.D12G185800 Gossypium hirsutum HOM05D003672 ORTHO05D004121 1.3e-27 128.3 263 42.6
Potri.008G096100 Populus trichocarpa HOM05D003672 ORTHO05D004121 1.7e-27 127.9 225 44.0
Actinidia18990 Actinidia chinensis HOM05D003672 ORTHO05D004121 2.9e-27 127.1 238 42.0
Potri.015G057600 Populus trichocarpa HOM05D003672 ORTHO05D004121 3.8e-27 126.7 232 41.8
Sopen03g034170 Solanum pennellii HOM05D003672 ORTHO05D004121 3.8e-27 126.7 228 42.5
Gohir.A12G182700 Gossypium hirsutum HOM05D003672 ORTHO05D004121 4.9e-27 126.3 263 42.2
Nitab4.5_0009401g0050 Nicotiana tabacum HOM05D003672 ORTHO05D004121 8.4e-27 125.6 237 40.5
COL.COLO4_06856 Corchorus olitorius HOM05D003672 ORTHO05D004121 1.1e-26 125.2 286 37.4
Duzib205G1655 Durio zibethinus HOM05D003672 ORTHO05D004121 1.1e-26 125.2 242 41.7
Gorai.008G199200 Gossypium raimondii HOM05D003672 ORTHO05D004121 1.9e-26 124.4 263 41.8
Actinidia35037 Actinidia chinensis HOM05D003672 ORTHO05D004121 2.5e-26 124.0 238 42.4
Gorai.001G077200 Gossypium raimondii HOM05D003672 ORTHO05D004121 2.5e-26 124.0 209 45.5
Nn4g23428 Nelumbo nucifera HOM05D003672 ORTHO05D004121 3.2e-26 123.6 236 40.7
Haze_11907 Corylus avellana HOM05D003672 ORTHO05D004121 4.2e-26 123.2 201 42.3
Gohir.D07G073000 Gossypium hirsutum HOM05D003672 ORTHO05D004121 4.2e-26 123.2 256 41.4
Lj5C102T25 Lonicera japonica HOM05D003672 ORTHO05D004121 4.2e-26 123.2 227 39.6
Atru.chr9.577 Acer truncatum HOM05D003672 ORTHO05D004121 7.1e-26 122.5 236 41.5
Manes.06G084700 Manihot esculenta HOM05D003672 ORTHO05D004121 7.1e-26 122.5 209 43.1
Gohir.A07G068500 Gossypium hirsutum HOM05D003672 ORTHO05D004121 9.3e-26 122.1 256 41.0
Nn3g17451 Nelumbo nucifera HOM05D003672 ORTHO05D004121 1.2e-25 121.7 233 41.6
arahy.Tifrunner.gnm1.ann1.R6LVKU Arachis hypogaea HOM05D003672 ORTHO05D004121 1.6e-25 121.3 281 38.1
Nitab4.5_0001485g0140 Nicotiana tabacum HOM05D003672 ORTHO05D004121 1.6e-25 121.3 237 39.7
arahy.Tifrunner.gnm1.ann1.03S8MC Arachis hypogaea HOM05D003672 ORTHO05D004121 3.5e-25 120.2 281 37.7
Migut.L01189 Erythranthe guttata HOM05D003672 ORTHO05D004121 3.5e-25 120.2 416 32.0
Ciclev10019089m.g Citrus clementina HOM05D003672 ORTHO05D004121 1.0e-24 118.6 229 40.6
Solyc03g115100.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 1.3e-24 118.2 228 40.8
Rhsim12G0074700 Rhododendron simsii HOM05D003672 ORTHO05D004121 3.0e-24 117.1 341 33.7
Cpa.g.sc94.57 Carica papaya HOM05D003672 ORTHO05D004121 3.9e-24 116.7 199 45.7
Cfa019341 Carpinus fangiana HOM05D003672 ORTHO05D004121 6.7e-24 115.9 237 38.0
QL03p074186 Quercus lobata HOM05D003672 ORTHO05D004121 8.7e-24 115.5 212 39.6
CANSAT80G1081 Cannabis sativa HOM05D003672 ORTHO05D004121 1.1e-23 115.2 240 38.8
Prupe.5G205200 Prunus persica HOM05D003672 ORTHO05D004121 1.1e-23 115.2 220 41.4
Rhsim12G0075200 Rhododendron simsii HOM05D003672 ORTHO05D004121 1.1e-23 115.2 345 33.3
THA.LOC104819401 Tarenaya hassleriana HOM05D003672 ORTHO05D004121 1.5e-23 114.8 202 45.0
DCAR_023172 Daucus carota HOM05D003672 ORTHO05D004121 3.3e-23 113.6 242 36.4
ClCG06G015630 Citrullus lanatus HOM05D003672 ORTHO05D004121 4.3e-23 113.2 273 38.1
Atru.chr11.1624 Acer truncatum HOM05D003672 ORTHO05D004121 7.4e-23 112.5 233 41.6
MD14G1212000 Malus domestica HOM05D003672 ORTHO05D004121 7.4e-23 112.5 222 39.2
Sabra08G0072400 Salix brachista HOM05D003672 ORTHO05D004121 9.6e-23 112.1 233 41.6
Ca_14345_v3 Cicer arietinum L. HOM05D003672 ORTHO05D004121 2.1e-22 110.9 208 41.8
Haze_07732 Corylus avellana HOM05D003672 ORTHO05D004121 2.1e-22 110.9 262 35.1
Oeu004585.2 Olea europaea HOM05D003672 ORTHO05D004121 2.8e-22 110.5 483 28.2
GSVIVG01007866001 Vitis vinifera HOM05D003672 ORTHO05D004121 2.8e-22 110.5 226 38.1
Eucgr.B00592 Eucalyptus grandis HOM05D003672 ORTHO05D004121 3.7e-22 110.2 218 42.2
QL03p074101 Quercus lobata HOM05D003672 ORTHO05D004121 3.7e-22 110.2 238 37.4
TWI60G1197 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 6.3e-22 109.4 281 37.0
Hma1.2p1_0060F.1_g033090 Hydrangea macrophylla HOM05D003672 ORTHO05D004121 1.1e-21 108.6 259 37.5
Cc00_g14840 Coffea canephora HOM05D003672 ORTHO05D004121 2.4e-21 107.5 226 38.9
AL8G37700 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 3.1e-21 107.1 197 41.6
CAN.G3169.1 Capsicum annuum HOM05D002946 ORTHO05D003299 3.1e-21 107.1 236 36.0
Rhsim12G0148200 Rhododendron simsii HOM05D003672 ORTHO05D004121 6.9e-21 105.9 222 39.2
Manes.14G085800 Manihot esculenta HOM05D003672 ORTHO05D004121 9.0e-21 105.5 218 39.0
PGR083G2392 Punica granatum HOM05D003672 ORTHO05D004121 9.0e-21 105.5 210 42.4
Migut.D01656 Erythranthe guttata HOM05D003672 ORTHO05D004121 1.2e-20 105.1 250 37.6
FvH4_5g13830 Fragaria vesca HOM05D003672 ORTHO05D004121 1.2e-20 105.1 207 40.1
FAN13G1740 Fragaria x ananassa HOM05D003672 ORTHO05D004121 1.2e-20 105.1 217 39.2
CAN.G1228.24 Capsicum annuum HOM05D003672 ORTHO05D004121 1.5e-20 104.8 225 36.9
FAN18G3332 Fragaria x ananassa HOM05D003672 ORTHO05D004121 2.0e-20 104.4 207 39.6
TPR.G12189 Trifolium pratense HOM05D003672 ORTHO05D004121 2.0e-20 104.4 208 38.9
CARHR274750 Cardamine hirsuta HOM05D003672 ORTHO05D004121 2.6e-20 104.0 204 40.2
PGR102G2240 Punica granatum HOM05D003672 ORTHO05D004121 2.6e-20 104.0 202 42.6
AT5G61040 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 7.6e-20 102.4 204 40.2
CsaV3_1G002930 Cucumis sativus L. HOM05D003672 ORTHO05D004121 7.6e-20 102.4 199 40.2
Lj1g0027425 Lotus japonicus HOM05D003672 ORTHO05D004121 1.0e-19 102.1 209 41.1
Hund02585 Selenicereus undatus HOM05D003672 ORTHO05D004121 1.0e-19 102.1 230 41.7
Glyma.06G203700 Glycine max HOM05D003672 ORTHO05D004121 1.3e-19 101.7 261 35.6
Aqoxy1G00151 Aquilegia oxysepala HOM05D003672 ORTHO05D004121 1.7e-19 101.3 249 36.5
Glyma.04G162600 Glycine max HOM05D003672 ORTHO05D004121 1.7e-19 101.3 261 36.4
ATR0177G058 Amborella trichopoda HOM05D003672 ORTHO05D004121 2.2e-19 100.9 282 35.8
MSTRG.22965 Avicennia marina HOM05D003672 ORTHO05D004121 2.9e-19 100.5 226 39.4
Thhalv10003875m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 3.8e-19 100.1 204 40.7
HanXRQChr09g0270231 Helianthus annuus HOM05D003672 ORTHO05D004121 6.5e-19 99.4 235 37.9
Medtr3g025870 Medicago truncatula HOM05D003672 ORTHO05D004121 6.5e-19 99.4 211 37.4
QL10p019524 Quercus lobata HOM05D003672 ORTHO05D004121 6.5e-19 99.4 225 36.4
Carub.0008s2173 Capsella rubella HOM05D003672 ORTHO05D004121 8.4e-19 99.0 204 41.2
PGSC0003DMG400024637 Solanum tuberosum HOM05D003672 ORTHO05D004121 8.4e-19 99.0 227 36.1
Oeu044870.1 Olea europaea HOM05D003672 ORTHO05D004121 1.9e-18 97.8 206 40.3
Lalb_Chr13g0302861 Lupinus albus HOM05D003672 ORTHO05D004121 2.5e-18 97.4 226 38.1
VMungo0331G1159 Vigna mungo HOM05D003672 ORTHO05D004121 2.5e-18 97.4 207 39.1
AUR62021559 Chenopodium quinoa HOM05D003672 ORTHO05D004121 3.2e-18 97.1 238 39.5
Lalb_Chr07g0178301 Lupinus albus HOM05D003672 ORTHO05D004121 4.2e-18 96.7 227 36.1
Sed0002350 Sechium edule HOM05D003672 ORTHO05D004121 4.2e-18 96.7 225 38.7
CiPaw.05G125000 Carya illinoinensis HOM05D003672 ORTHO05D004121 5.5e-18 96.3 226 35.0
CiPaw.12G008500 Carya illinoinensis HOM05D003672 ORTHO05D004121 9.3e-18 95.5 233 38.2
Dinv17414 Davidia involucrata HOM05D003672 ORTHO05D004121 1.2e-17 95.1 188 42.0
Lsat_1_v5_gn_8_46340 Lactuca sativa HOM05D003672 ORTHO05D004121 1.2e-17 95.1 426 29.3
Psat2g037720 Pisum sativum HOM05D003672 ORTHO05D004121 1.2e-17 95.1 290 34.1
arahy.Tifrunner.gnm1.ann1.SKH1UB Arachis hypogaea HOM05D003672 ORTHO05D004121 1.6e-17 94.7 217 36.9
AUR62008531 Chenopodium quinoa HOM05D003672 ORTHO05D004121 1.6e-17 94.7 238 39.1
MELO3C017225.2 Cucumis melo HOM05D003672 ORTHO05D004121 1.6e-17 94.7 270 33.0
ECA232G2426 Erigeron canadensis HOM05D003672 ORTHO05D004121 1.6e-17 94.7 234 35.5
FAN08G3423 Fragaria x ananassa HOM05D003672 ORTHO05D004121 1.6e-17 94.7 226 35.8
EL10Ac5g11131 Beta vulgaris HOM05D003672 ORTHO05D004121 2.1e-17 94.4 241 40.2
BraA03t13796Z Brassica rapa HOM05D003672 ORTHO05D004121 2.1e-17 94.4 191 40.3
arahy.Tifrunner.gnm1.ann1.N0JE3Z Arachis hypogaea HOM05D003672 ORTHO05D004121 2.7e-17 94.0 217 36.9
Phvul.010G007200 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 2.7e-17 94.0 222 37.4
SalBow7G3172 Salvia bowleyana HOM05D003672 ORTHO05D004121 4.6e-17 93.2 243 35.8
HPP92_007830 Vanilla planifolia HOM05D003672 ORTHO05D004121 4.6e-17 93.2 235 35.3
A03p46740 Brassica napus HOM05D003672 ORTHO05D004121 6.1e-17 92.8 128 50.0
Zm00001eb136280 Zea mays HOM05D003672 ORTHO05D004121 6.1e-17 92.8 280 35.0
TWI81G0716 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 7.9e-17 92.4 242 32.6
A10p28610 Brassica napus HOM05D003672 ORTHO05D004121 1.0e-16 92.0 209 39.7
BraA10t44910Z Brassica rapa HOM05D003672 ORTHO05D004121 1.3e-16 91.7 202 41.1
Oeu061164.2 Olea europaea HOM05D003672 ORTHO05D004121 1.3e-16 91.7 236 34.7
Eucgr.B03149 Eucalyptus grandis HOM05D003672 ORTHO05D004121 1.8e-16 91.3 233 36.5
Aa31LG3G18520 Aethionema arabicum HOM05D003672 ORTHO05D004121 2.3e-16 90.9 190 38.4
TWI15G0151 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 2.3e-16 90.9 247 34.8
HanXRQChr16g0502451 Helianthus annuus HOM05D003672 ORTHO05D004121 3.0e-16 90.5 217 36.4
Lsat_1_v5_gn_4_111040 Lactuca sativa HOM05D003672 ORTHO05D004121 3.9e-16 90.1 190 41.1
Manes.01G028000 Manihot esculenta HOM05D003672 ORTHO05D004121 3.9e-16 90.1 232 36.2
AL6G18360 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 5.1e-16 89.7 126 52.4
AT5G08010 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 5.1e-16 89.7 129 51.2
Ah.02g114040 Amaranthus hybridus HOM05D003672 ORTHO05D004121 6.7e-16 89.4 234 38.0
MBI16_g38067_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 1.1e-15 88.6 223 35.9
Sed0025785 Sechium edule HOM05D003672 ORTHO05D004121 1.1e-15 88.6 221 36.2
Hund09914 Selenicereus undatus HOM05D003672 ORTHO05D004121 1.5e-15 88.2 276 33.0
CiPaw.11G053900 Carya illinoinensis HOM05D003672 ORTHO05D004121 1.9e-15 87.8 230 33.9
Thhalv10013089m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 1.9e-15 87.8 198 40.4
vmacro01315 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 2.5e-15 87.4 243 36.6
Os12g0576300 Oryza sativa ssp. japonica HOM05D003672 ORTHO05D004121 3.3e-15 87.0 272 32.7
C09p68900 Brassica napus HOM05D003672 ORTHO05D004121 4.3e-15 86.7 148 44.6
BolC9t59636H Brassica oleracea HOM05D003672 ORTHO05D004121 4.3e-15 86.7 148 44.6
Carub.0006s0690 Capsella rubella HOM05D003672 ORTHO05D004121 4.3e-15 86.7 190 37.9
Sp2g24340 Schrenkiella parvula HOM05D003672 ORTHO05D004121 1.3e-14 85.1 204 38.2
Sabra15G0083600 Salix brachista HOM05D003672 ORTHO05D004121 1.6e-14 84.7 248 33.5
BcaC06g33181 Brassica carinata HOM05D003672 ORTHO05D004121 2.2e-14 84.3 190 39.5
BcaB08g37298 Brassica carinata HOM05D003672 ORTHO05D004121 3.7e-14 83.6 199 38.2
Phvul.003G184800 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 6.3e-14 82.8 208 36.1
CDE07G1307 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 8.2e-14 82.4 143 44.8
ECA233G1662 Erigeron canadensis HOM05D000677 ORTHO05D000727 1.4e-13 81.6 417 27.1
C07p44780 Brassica napus HOM05D003672 ORTHO05D004121 3.1e-13 80.5 190 38.9
Ciclev10033781m.g Citrus clementina HOM05D003672 ORTHO05D004121 4.1e-13 80.1 421 27.3
CsaV3_1G005970 Cucumis sativus L. HOM05D003672 ORTHO05D004121 5.3e-13 79.7 223 34.1
Glyma.05G021000 Glycine max HOM05D003672 ORTHO05D004121 5.3e-13 79.7 224 35.7
Lj4g0018287 Lotus japonicus HOM05D003672 ORTHO05D004121 6.9e-13 79.3 251 33.1
PSO478G1233 Papaver somniferum HOM05D003672 ORTHO05D004121 1.5e-12 78.2 223 34.5
unitig_749.g13432 Utricularia gibba HOM05D003672 ORTHO05D004121 1.5e-12 78.2 196 35.2
Zm00001eb029540 Zea mays HOM05D003672 ORTHO05D004121 1.5e-12 78.2 248 33.1
Sp6g34930 Schrenkiella parvula HOM05D003672 ORTHO05D004121 2.0e-12 77.8 107 50.5
CDE04G0191 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 2.6e-12 77.4 217 34.1
Ah.11g047770 Amaranthus hybridus HOM05D003672 ORTHO05D004121 5.9e-12 76.3 282 33.3
vmacro16495 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 7.7e-12 75.9 245 32.2
CARHR205170 Cardamine hirsuta HOM05D003672 ORTHO05D004121 1.0e-11 75.5 208 35.6
RcHm_v2.0_Chr7g0183101 Rosa chinensis HOM05D003672 ORTHO05D004121 1.7e-11 74.7 221 32.6
SGA_v2.0_scaffold25G10960 Striga asiatica HOM05D003672 ORTHO05D004121 2.2e-11 74.3 232 32.3
PSO017G3206 Papaver somniferum HOM05D003672 ORTHO05D004121 1.4e-10 71.6 223 33.6
MELO3C002028.2 Cucumis melo HOM05D003672 ORTHO05D004121 2.5e-10 70.9 223 31.8
HanXRQChr12g0363081 Helianthus annuus HOM05D003672 ORTHO05D004121 2.5e-10 70.9 216 34.3
ClCG04G011810 Citrullus lanatus HOM05D003672 ORTHO05D004121 1.2e-09 68.6 208 33.2
SEGI_35614 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 4.6e-09 66.6 227 33.0
HPP92_000460 Vanilla planifolia HOM05D003672 ORTHO05D004121 7.9e-09 65.9 233 31.8
Aa31LG11G2260 Aethionema arabicum HOM05D003672 ORTHO05D004121 1.4e-08 65.1 184 38.0
BcaB08g37300 Brassica carinata HOM05D003672 ORTHO05D004121 1.8e-08 64.7 106 43.4
BolC7t45002H Brassica oleracea HOM05D003672 ORTHO05D004121 3.0e-08 63.9 197 35.0
VMungo1215G3071 Vigna mungo HOM05D003672 ORTHO05D004121 2.0e-07 61.2 112 39.3
Lj5A435T21 Lonicera japonica HOM05D003672 ORTHO05D004121 2.5e-07 60.8 216 29.6
SEGI_10408 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 2.5e-07 60.8 208 30.8
CANSAT39G0004 Cannabis sativa HOM05D003672 ORTHO05D004121 9.7e-07 58.9 74 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 8.2e-06 55.8 133 31.6


User provided reference genes

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