Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 6.1e-74 280.8 148 100.0
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 1.0e-65 253.4 147 91.8
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 2.2e-63 245.7 149 87.9
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 4.8e-63 244.6 147 89.8
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 6.3e-63 244.2 148 87.8
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 3.1e-62 241.9 145 88.3
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 1.6e-61 239.6 148 84.5
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 7.7e-61 237.3 147 84.4
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 2.5e-59 232.3 147 83.0
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 5.5e-59 231.1 148 83.8
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.1e-58 229.2 147 81.6
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 81.6
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 1.0e-57 226.9 147 83.0
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-57 225.7 147 81.6
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-57 225.7 147 81.6
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-57 225.7 147 81.6
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 2.3e-57 225.7 148 82.4
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 2.3e-57 225.7 148 81.8
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 3.0e-57 225.3 148 81.1
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 4.0e-57 224.9 147 82.3
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 4.0e-57 224.9 148 81.8
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 4.0e-57 224.9 148 81.8
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 5.2e-57 224.6 147 79.6
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 5.2e-57 224.6 147 79.6
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 6.7e-57 224.2 148 81.1
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 6.7e-57 224.2 146 80.8
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 8.8e-57 223.8 147 82.3
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 8.8e-57 223.8 148 79.7
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 8.8e-57 223.8 148 79.1
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.2e-56 223.4 147 78.9
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.2e-56 223.4 147 78.9
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 1.5e-56 223.0 147 80.3
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.0e-56 222.6 147 78.2
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.0e-56 222.6 147 78.2
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 2.0e-56 222.6 148 81.1
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 2.0e-56 222.6 147 79.6
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 3.3e-56 221.9 147 80.3
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.4e-56 221.5 147 80.3
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 4.4e-56 221.5 148 81.1
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 7.5e-56 220.7 147 78.9
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 7.5e-56 220.7 147 81.6
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 7.5e-56 220.7 144 79.2
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 7.5e-56 220.7 148 81.8
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 9.7e-56 220.3 147 78.9
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 9.7e-56 220.3 147 78.9
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 1.3e-55 219.9 147 77.6
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.3e-55 219.9 148 79.1
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 1.7e-55 219.5 148 81.1
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.8e-55 218.8 148 79.7
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.8e-55 218.8 148 79.7
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 2.8e-55 218.8 147 78.9
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.8e-55 218.0 148 79.7
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 6.3e-55 217.6 149 77.9
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 6.3e-55 217.6 147 78.2
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 6.3e-55 217.6 147 81.0
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 8.2e-55 217.2 144 78.5
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 8.2e-55 217.2 144 78.5
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 8.2e-55 217.2 148 79.7
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.1e-54 216.9 147 78.9
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.4e-54 216.5 144 78.5
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 1.4e-54 216.5 147 76.9
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.8e-54 216.1 144 77.8
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 1.8e-54 216.1 144 77.8
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 2.4e-54 215.7 147 79.6
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 5.3e-54 214.5 147 78.2
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 7.0e-54 214.2 147 76.2
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 7.0e-54 214.2 148 78.4
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.7e-53 212.2 150 75.3
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 3.5e-53 211.8 145 75.9
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 7.7e-53 210.7 147 75.5
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 1.0e-52 210.3 148 79.1
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 1.3e-52 209.9 138 80.4
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 5.0e-52 208.0 147 76.9
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 6.5e-52 207.6 147 76.9
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 1.5e-51 206.5 147 74.8
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 1.9e-51 206.1 155 73.5
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 5.5e-51 204.5 147 74.8
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 9.4e-51 203.8 140 80.0
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 1.6e-50 203.0 148 70.3
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.6e-50 203.0 152 73.7
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.7e-50 202.2 109 99.1
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 4.7e-50 201.4 148 76.4
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 4.7e-50 201.4 149 73.2
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 6.1e-50 201.1 148 75.7
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 8.0e-50 200.7 150 74.0
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.8e-49 197.6 151 71.5
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.8e-49 197.6 151 71.5
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.2e-48 196.8 149 71.8
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.2e-48 196.8 148 74.3
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 7.5e-48 194.1 150 71.3
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.8e-46 189.5 152 69.7
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 3.1e-46 188.7 154 68.2
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.2e-45 186.8 157 66.2
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 1.6e-45 186.4 149 66.4
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 1.6e-45 186.4 152 69.1
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 4.5e-45 184.9 153 66.7
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 5.9e-45 184.5 153 66.0
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.3e-44 183.3 147 68.7
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.3e-44 182.6 147 68.7
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.8e-44 181.8 147 68.0
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 5.0e-44 181.4 154 67.5
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 6.5e-44 181.0 116 81.9
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 3.3e-43 178.7 147 68.0
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 9.5e-43 177.2 147 67.3
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 1.4e-41 173.3 153 65.4
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 8.9e-41 170.6 113 82.3
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 1.7e-39 166.4 140 66.4
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 1.7e-39 166.4 140 66.4
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 1.1e-38 163.7 162 58.0
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 3.1e-38 162.2 148 64.2
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 5.4e-38 161.4 106 81.1
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 1.6e-37 159.8 140 65.0
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 2.7e-37 159.1 151 58.9
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 3.5e-37 158.7 150 63.3
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 7.8e-37 157.5 141 66.7
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 4.3e-35 151.8 146 62.3
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 4.7e-34 148.3 147 59.9
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 6.1e-34 147.9 101 77.2
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 9.2e-30 134.0 86 81.4
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.0e-29 132.9 104 70.2
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 2.0e-29 132.9 104 70.2
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 4.6e-29 131.7 152 52.6
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 1.3e-28 130.2 85 77.6
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 3.0e-28 129.0 133 54.9
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 5.0e-28 128.3 134 56.0
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 1.4e-25 120.2 151 48.3
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 4.0e-25 118.6 167 49.1
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 1.5e-19 100.1 78 65.4
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 4.3e-19 98.6 149 43.6
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 7.3e-19 97.8 71 70.4
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 7.3e-19 97.8 71 70.4
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 7.3e-19 97.8 79 58.2
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 1.2e-18 97.1 79 60.8
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.2e-18 97.1 92 58.7
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 1.4e-17 93.6 71 64.8
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.3e-17 92.8 69 65.2
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.1e-17 92.4 69 65.2
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 4.0e-17 92.0 69 60.9
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.0e-17 92.0 69 63.8
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.2e-16 90.5 147 40.1
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 1.2e-16 90.5 145 43.4
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.5e-11 73.6 73 49.3
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 4.3e-11 72.0 73 49.3
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 1.4e-09 67.0 70 45.7
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 1.4e-09 67.0 72 50.0
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 4.0e-09 65.5 126 42.9
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 7.6e-08 61.2 72 45.8
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 8.4e-07 57.8 51 58.8
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 2.4e-06 56.2 83 36.1


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