Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-73 278.1 151 100.0
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 2.3e-68 262.3 150 94.7
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-62 243.4 152 91.4
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-59 233.4 151 87.4
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-56 223.0 150 84.7
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.9e-56 220.3 148 85.1
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-55 217.6 151 82.8
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-54 215.3 151 83.4
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 4.3e-51 204.9 150 80.0
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-51 203.8 143 82.5
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-47 192.6 127 87.4
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-46 188.3 152 73.7
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-43 179.9 132 78.8
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-43 177.6 152 73.7
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-38 161.0 143 72.0
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-36 156.8 150 66.0
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-35 153.3 148 66.2
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-35 151.0 112 75.9
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-34 147.5 152 63.8
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-33 145.6 121 71.9
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-32 141.7 130 66.9
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-30 136.7 103 79.6
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-30 134.4 136 64.7
Nitab4.5_0000141g0160 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-25 120.2 113 67.3
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-20 103.2 156 48.1
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-19 100.1 157 46.5
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-19 100.1 119 58.0
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.8e-18 95.9 151 44.4
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-18 95.1 156 45.5
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-18 94.4 151 45.0
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-17 92.8 152 44.1
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-17 92.4 156 44.9
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-17 90.9 154 43.5
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-16 90.5 157 43.3
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-16 89.4 151 43.0
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-15 87.4 152 43.4
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-15 87.0 157 42.0
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 2.9e-15 85.9 155 40.6
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-15 85.9 151 39.1
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-15 85.5 156 43.6
Nitab4.5_0000059g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-15 84.7 55 80.0
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.5e-15 84.3 152 45.4
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.5e-15 84.3 151 43.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-14 84.0 151 38.4
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-14 81.6 151 42.4
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-13 80.5 150 40.7
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-13 80.1 156 41.0
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-13 79.7 152 41.4
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-13 79.3 153 39.2
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-13 79.3 156 41.0
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-12 76.3 151 35.1
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-12 76.3 148 40.5
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-12 75.9 147 40.8
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.0e-12 75.5 151 39.1
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-12 75.1 142 42.3
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-12 75.1 153 38.6
Nitab4.5_0000936g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-11 73.9 52 75.0
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-11 73.2 152 40.8
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-11 72.4 153 37.3
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.3e-11 72.4 147 38.1
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-11 72.0 147 38.1
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.7e-11 71.6 151 37.7
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-11 70.9 141 40.4
Solyc09g062990.2 Solanum lycopersicum HOM05D003911 ORTHO05D002175 9.7e-11 70.9 146 37.0
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.3e-10 70.5 146 39.7
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-10 70.1 136 40.4
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-10 69.3 152 37.5
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 2.8e-10 69.3 151 35.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.8e-10 69.3 151 37.1
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 6.3e-10 68.2 144 36.1
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-10 68.2 136 39.0
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-10 68.2 130 40.8
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 6.3e-10 68.2 149 34.2
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.2e-10 67.8 147 36.7
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-10 67.8 150 38.7
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-10 67.8 152 40.1
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-09 67.4 154 38.3
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-09 67.0 154 39.6
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-09 66.6 106 46.2
PGSC0003DMG400043570 Solanum tuberosum HOM05D003911 ORTHO05D002175 1.8e-09 66.6 104 46.2
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 2.4e-09 66.2 151 35.8
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.1e-09 65.9 42 83.3
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-09 65.9 135 37.0
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-09 65.9 153 35.3
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 4.1e-09 65.5 147 36.1
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-09 65.5 148 39.2
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-09 65.1 151 39.7
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-09 64.7 156 37.8
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.1e-09 64.3 151 35.1
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 9.1e-09 64.3 98 40.8
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-08 63.9 151 34.4
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-08 63.5 134 38.8
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-08 63.5 136 39.7
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-08 63.2 153 35.9
CAN.G400.14 Capsicum annuum HOM05D003911 ORTHO05D001773 2.7e-08 62.8 135 37.8
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-08 62.4 157 35.7
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-08 62.4 150 36.7
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-08 62.0 84 45.2
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 4.5e-08 62.0 100 47.0
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-08 62.0 98 39.8
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 7.7e-08 61.2 155 33.5
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-08 61.2 147 37.4
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-07 60.8 149 38.3
Solyc02g005145.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.0e-07 60.8 143 32.9
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 1.3e-07 60.5 144 34.0
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-07 60.5 157 37.6
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-07 60.1 105 41.0
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-07 59.3 97 39.2
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 2.9e-07 59.3 150 32.0
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-07 58.9 155 34.2
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-07 58.5 114 37.7
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-07 58.2 103 41.7
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 1.1e-06 57.4 82 46.3
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-06 57.4 94 36.2
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-06 57.0 98 37.8
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-06 57.0 135 37.0
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-06 57.0 131 34.4
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.9e-06 56.6 144 34.0
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.5e-06 56.2 150 33.3
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-06 55.8 129 41.1
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-06 55.8 94 37.2
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-06 55.5 100 35.0
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-06 55.1 147 34.7
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-06 54.7 144 35.4
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-06 54.3 138 38.4
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-06 54.3 149 35.6


User provided reference genes

Program Settings