Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009549g0060 Nicotiana tabacum HOM05D007956 ORTHO05D010042 5.2e-116 421.4 269 100.0
Nitab4.5_0002310g0060 Nicotiana tabacum HOM05D007893 ORTHO05D010042 7.4e-54 214.9 145 74.5
Nitab4.5_0000256g0090 Nicotiana tabacum HOM05D007893 ORTHO05D010042 4.8e-53 212.2 145 74.5
AUR62022001 Chenopodium quinoa HOM05D007956 ORTHO05D010152 2.7e-11 73.6 126 26.2
Ah.09g235260 Amaranthus hybridus HOM05D007956 ORTHO05D010152 4.6e-11 72.8 126 28.6
EL10Ac8g19997 Beta vulgaris HOM05D007956 ORTHO05D010152 1.0e-10 71.6 120 30.0
Cfa000267 Carpinus fangiana HOM05D007956 ORTHO05D010152 6.6e-10 68.9 126 27.8
AUR62012653 Chenopodium quinoa HOM05D007956 ORTHO05D010152 6.6e-10 68.9 115 27.0
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 6.6e-10 68.9 127 25.2
Sc17g0007100 Simmondsia chinensis HOM05D007956 ORTHO05D010152 8.6e-10 68.6 126 27.0
Cc02_g11640 Coffea canephora HOM05D007956 ORTHO05D010152 1.1e-09 68.2 127 28.3
PSO266G0010 Papaver somniferum HOM05D003900 ORTHO05D005009 1.1e-09 68.2 105 31.4
CANSAT56G1376 Cannabis sativa HOM05D007956 ORTHO05D010152 1.5e-09 67.8 115 31.3
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 1.9e-09 67.4 136 30.1
Ca_24987_v3 Cicer arietinum L. HOM05D006556 ORTHO05D008146 3.3e-09 66.6 129 31.8
Duzib068G1049 Durio zibethinus HOM05D007893 ORTHO05D010042 5.6e-09 65.9 63 50.8
Sed0017189 Sechium edule HOM05D003900 ORTHO05D005009 2.1e-08 63.9 141 28.4
Medtr5g024320 Medicago truncatula HOM05D006556 ORTHO05D008146 3.6e-08 63.2 129 30.2
TWI60G0064 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 3.6e-08 63.2 51 56.9
PSO170G2530 Papaver somniferum HOM05D008994 ORTHO05D010954 4.7e-08 62.8 125 30.4
Thhalv10024760m.g Eutrema salsugineum HOM05D007956 ORTHO05D010152 6.2e-08 62.4 133 28.6
Ah.15g096610 Amaranthus hybridus HOM05D003900 ORTHO05D005009 8.1e-08 62.0 102 31.4
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 1.1e-07 61.6 120 25.0
Gohir.A05G168200 Gossypium hirsutum HOM05D007956 ORTHO05D010152 1.4e-07 61.2 127 25.2
Potri.014G090400 Populus trichocarpa HOM05D003900 ORTHO05D005009 1.8e-07 60.8 105 28.6
TAR629G0263 Trochodendron aralioides HOM05D003900 ORTHO05D005009 2.3e-07 60.5 79 32.9
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 3.1e-07 60.1 140 23.6
FAN04G0755 Fragaria x ananassa HOM05D003900 ORTHO05D005009 3.1e-07 60.1 108 29.6
Gorai.009G176500 Gossypium raimondii HOM05D007956 ORTHO05D010152 3.1e-07 60.1 127 25.2
HanXRQChr04g0120801 Helianthus annuus HOM05D003900 ORTHO05D005009 3.1e-07 60.1 85 31.8
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 3.1e-07 60.1 108 32.4
TWI81G0227 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 3.1e-07 60.1 52 55.8
AT4G21170 Arabidopsis thaliana HOM05D007956 ORTHO05D010152 4.0e-07 59.7 115 29.6
A01p12520 Brassica napus HOM05D007956 ORTHO05D010152 4.0e-07 59.7 115 28.7
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 4.0e-07 59.7 124 29.0
FvH4_5g03011 Fragaria vesca HOM05D003900 ORTHO05D005009 4.0e-07 59.7 105 28.6
FAN10G3614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 4.0e-07 59.7 127 24.4
TWI38G0189 Tripterygium wilfordii HOM05D007956 ORTHO05D010152 4.0e-07 59.7 127 25.2
FAN01G0431 Fragaria x ananassa HOM05D003900 ORTHO05D005009 5.2e-07 59.3 127 24.4
Lsat_1_v5_gn_4_59081 Lactuca sativa HOM05D007956 ORTHO05D010152 5.2e-07 59.3 118 25.4
Nn1g07048 Nelumbo nucifera HOM05D007956 ORTHO05D010152 5.2e-07 59.3 116 25.0
Potri.008G044050 Populus trichocarpa HOM05D005362 ORTHO05D031602 5.2e-07 59.3 107 29.0
Dinv32521 Davidia involucrata HOM05D003900 ORTHO05D005009 6.8e-07 58.9 104 28.8
Gohir.D05G171300 Gossypium hirsutum HOM05D007956 ORTHO05D010152 6.8e-07 58.9 127 25.2
BcaC06g36288 Brassica carinata HOM05D006556 ORTHO05D008146 8.9e-07 58.5 127 24.4
CSS0000093 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 8.9e-07 58.5 79 39.2
CSS0016355 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 8.9e-07 58.5 79 39.2
Solyc02g080170.1 Solanum lycopersicum HOM05D007956 ORTHO05D010152 8.9e-07 58.5 118 26.3
Carub.0005s2821 Capsella rubella HOM05D003900 ORTHO05D005009 1.2e-06 58.2 124 26.6
Eucgr.E00255 Eucalyptus grandis HOM05D007893 ORTHO05D010042 1.2e-06 58.2 53 56.6
Manes.01G252300 Manihot esculenta HOM05D003900 ORTHO05D005009 1.2e-06 58.2 101 30.7
Peaxi162Scf00427g00116 Petunia axillaris HOM05D007956 ORTHO05D010152 1.2e-06 58.2 123 26.0
Potri.005G102400 Populus trichocarpa HOM05D006556 ORTHO05D008146 1.2e-06 58.2 129 29.5
Prupe.6G071300 Prunus persica HOM05D000001 ORTHO05D009726 1.2e-06 58.2 122 31.1
RcHm_v2.0_Chr1g0357681 Rosa chinensis HOM05D003900 ORTHO05D005009 1.2e-06 58.2 98 30.6
Sabra14G0065500 Salix brachista HOM05D003900 ORTHO05D005009 1.2e-06 58.2 107 27.1
Sopen02g024890 Solanum pennellii HOM05D007956 ORTHO05D010152 1.2e-06 58.2 118 26.3
TWI23G0979 Tripterygium wilfordii HOM05D003900 ORTHO05D005009 1.2e-06 58.2 104 30.8
ATR0721G158 Amborella trichopoda HOM05D003900 ORTHO05D005009 1.5e-06 57.8 131 26.7
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.0e-06 57.4 122 30.3
Sc01g0003220 Simmondsia chinensis HOM05D003900 ORTHO05D005009 2.0e-06 57.4 78 30.8
FAN03G2211 Fragaria x ananassa HOM05D003900 ORTHO05D005009 2.6e-06 57.0 104 26.0
CAN.G569.38 Capsicum annuum HOM05D007956 ORTHO05D010152 3.4e-06 56.6 118 26.3
FvH4_5g32150 Fragaria vesca HOM05D003900 ORTHO05D005009 3.4e-06 56.6 108 28.7
FAN10G1060 Fragaria x ananassa HOM05D003900 ORTHO05D005009 3.4e-06 56.6 127 23.6
Sp6g28790 Schrenkiella parvula HOM05D006569 ORTHO05D007515 3.4e-06 56.6 175 26.3
Aa31LG1G13560 Aethionema arabicum HOM05D000055 ORTHO05D003950 4.4e-06 56.2 124 27.4
Lalb_Chr04g0259301 Lupinus albus HOM05D003900 ORTHO05D005009 4.4e-06 56.2 138 27.5
SMO196G0165 Selaginella moellendorffii HOM05D005973 ORTHO05D007285 4.4e-06 56.2 129 27.9
Aa31LG10G15460 Aethionema arabicum HOM05D003900 ORTHO05D005009 5.8e-06 55.8 124 26.6
arahy.Tifrunner.gnm1.ann1.JDFT5B Arachis hypogaea HOM05D000001 ORTHO05D015413 5.8e-06 55.8 138 23.9
C02p47730 Brassica napus HOM05D005674 ORTHO05D007015 5.8e-06 55.8 146 27.4
BolC2t10809H Brassica oleracea HOM05D005674 ORTHO05D007015 5.8e-06 55.8 146 27.4
BraA01t01197Z Brassica rapa HOM05D007956 ORTHO05D010152 5.8e-06 55.8 115 27.8
Carub.0007s2026 Capsella rubella HOM05D007956 ORTHO05D010152 5.8e-06 55.8 111 27.9
ClCG09G009150 Citrullus lanatus HOM05D003900 ORTHO05D005009 5.8e-06 55.8 104 28.8
FAN06G0440 Fragaria x ananassa HOM05D003900 ORTHO05D005009 5.8e-06 55.8 79 34.2
RcHm_v2.0_Chr5g0017031 Rosa chinensis HOM05D003900 ORTHO05D005009 5.8e-06 55.8 105 28.6
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 5.8e-06 55.8 86 31.4
EL10Ac6g14755 Beta vulgaris HOM05D000249 ORTHO05D000206 7.5e-06 55.5 128 27.3
FvH4_7g15360 Fragaria vesca HOM05D003900 ORTHO05D005009 7.5e-06 55.5 79 32.9
Manes.05G029400 Manihot esculenta HOM05D003900 ORTHO05D005009 7.5e-06 55.5 128 25.8
PGR142G0969 Punica granatum HOM05D003900 ORTHO05D005009 7.5e-06 55.5 105 27.6
BcaC09g51250 Brassica carinata HOM05D007956 ORTHO05D010152 9.9e-06 55.1 115 26.1
C01p15110 Brassica napus HOM05D007956 ORTHO05D010152 9.9e-06 55.1 115 26.1
BolC1t01460H Brassica oleracea HOM05D007956 ORTHO05D010152 9.9e-06 55.1 115 26.1
Cpa.g.sc64.144 Carica papaya HOM05D000424 ORTHO05D000355 9.9e-06 55.1 96 26.0
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 9.9e-06 55.1 75 32.0
MBI18_g39550_MAGBIO Magnolia biondii HOM05D007956 ORTHO05D010152 9.9e-06 55.1 126 25.4
Phvul.002G326200 Phaseolus vulgaris HOM05D003900 ORTHO05D005009 9.9e-06 55.1 81 33.3
RcHm_v2.0_Chr7g0228211 Rosa chinensis HOM05D003900 ORTHO05D005009 9.9e-06 55.1 105 27.6
VMungo1309G0481 Vigna mungo HOM05D006842 ORTHO05D008908 9.9e-06 55.1 103 28.2


User provided reference genes

Program Settings