Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009543g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 0.0e+00 1081.6 1147 100.0
Nitab4.5_0002816g0010 Nicotiana tabacum HOM05D003975 ORTHO05D009762 1.5e-236 823.9 1132 90.4
CAN.G48.19 Capsicum annuum HOM05D003975 ORTHO05D009762 4.0e-141 506.9 848 74.5
Nitab4.5_0002149g0030 Nicotiana tabacum HOM05D003975 ORTHO05D009762 7.6e-140 502.7 1102 56.4
Sopen03g023950 Solanum pennellii HOM05D003975 ORTHO05D009762 2.6e-124 451.1 983 82.5
Solyc03g093150.3 Solanum lycopersicum HOM05D003975 ORTHO05D009762 1.3e-123 448.7 983 82.7
PGSC0003DMG402014825 Solanum tuberosum HOM05D003975 ORTHO05D009762 5.0e-123 446.8 983 81.3
Peaxi162Scf00241g00015 Petunia axillaris HOM05D003975 ORTHO05D009762 8.5e-107 392.9 991 80.6
Dinv28563 Davidia involucrata HOM05D003975 ORTHO05D009762 5.4e-85 320.5 824 73.7
Lj8C41T2 Lonicera japonica HOM05D003975 ORTHO05D009762 1.2e-71 276.2 816 72.9
MSTRG.8816 Avicennia marina HOM05D003975 ORTHO05D009762 5.8e-71 273.9 825 64.5
Cc00_g07030 Coffea canephora HOM05D003975 ORTHO05D009762 7.5e-71 273.5 853 66.6
CANSAT11G0896 Cannabis sativa HOM05D003975 ORTHO05D009762 8.3e-62 243.4 830 60.5
Haze_13863 Corylus avellana HOM05D003975 ORTHO05D009762 1.1e-61 243.0 846 61.1
Rhsim09G0192100 Rhododendron simsii HOM05D000201 ORTHO05D000375 6.0e-60 237.3 826 66.1
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 5.6e-58 230.7 848 65.7
Cfa008191 Carpinus fangiana HOM05D003975 ORTHO05D009762 4.7e-57 227.6 844 63.6
SGA_v2.0_scaffold2G01188 Striga asiatica HOM05D003975 ORTHO05D009762 4.6e-52 211.1 818 59.9
Lsat_1_v5_gn_8_8880 Lactuca sativa HOM05D003975 ORTHO05D009762 1.1e-48 199.9 836 58.3
Atru.chr1.696 Acer truncatum HOM05D003975 ORTHO05D009762 4.9e-46 191.0 800 54.5
Migut.F00464 Erythranthe guttata HOM05D003975 ORTHO05D009762 8.4e-46 190.3 832 61.9
Thecc.03G157100 Theobroma cacao HOM05D003975 ORTHO05D009762 2.4e-45 188.7 838 59.8
DCAR_029158 Daucus carota HOM05D003975 ORTHO05D009762 4.3e-42 177.9 835 60.7
Nitab4.5_0002556g0070 Nicotiana tabacum HOM05D003975 ORTHO05D009762 4.3e-42 177.9 96 93.8
CSS0048267 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 5.3e-40 171.0 432 71.3
GSVIVG01018516001 Vitis vinifera HOM05D003975 ORTHO05D009762 6.4e-38 164.1 432 64.1
TWI39G0436 Tripterygium wilfordii HOM05D003975 ORTHO05D009762 3.2e-37 161.8 832 60.9
QL09p019427 Quercus lobata HOM05D003975 ORTHO05D009762 1.2e-36 159.8 847 56.6
ECA233G1567 Erigeron canadensis HOM05D003975 ORTHO05D009762 6.0e-36 157.5 775 48.6
Manes.15G055100 Manihot esculenta HOM05D003975 ORTHO05D009762 7.3e-34 150.6 199 41.2
HanXRQChr05g0142511 Helianthus annuus HOM05D003975 ORTHO05D009762 9.6e-34 150.2 797 48.3
MELO3C006816.2 Cucumis melo HOM05D003975 ORTHO05D009762 8.1e-33 147.1 203 43.8
Sed0001623 Sechium edule HOM05D003975 ORTHO05D009762 1.8e-32 146.0 187 43.3
Gorai.003G114200 Gossypium raimondii HOM05D003975 ORTHO05D009762 3.1e-32 145.2 817 63.3
QL05p001270 Quercus lobata HOM05D003975 ORTHO05D009762 3.1e-32 145.2 198 44.9
Ciclev10004237m.g Citrus clementina HOM05D003975 ORTHO05D009762 4.0e-32 144.8 200 39.5
Duzib205G1466 Durio zibethinus HOM05D003975 ORTHO05D009762 5.3e-32 144.4 817 59.4
CiPaw.03G094900 Carya illinoinensis HOM05D003975 ORTHO05D009762 3.4e-31 141.7 847 60.4
Gohir.D03G107900 Gossypium hirsutum HOM05D003975 ORTHO05D009762 3.4e-31 141.7 817 63.0
COL.COLO4_14135 Corchorus olitorius HOM05D003975 ORTHO05D009762 2.2e-30 139.0 486 57.0
Eucgr.D00222 Eucalyptus grandis HOM05D003975 ORTHO05D009762 6.4e-30 137.5 801 57.3
Aqoxy6G00092 Aquilegia oxysepala HOM05D003975 ORTHO05D009762 2.1e-28 132.5 184 41.8
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 2.1e-28 132.5 511 35.0
Sabra15G0045800 Salix brachista HOM05D003975 ORTHO05D009762 2.7e-28 132.1 530 36.2
Sabra15G0054000 Salix brachista HOM05D003975 ORTHO05D009762 2.7e-28 132.1 528 32.4
TAR375G0346 Trochodendron aralioides HOM05D003975 ORTHO05D009762 4.6e-28 131.3 149 46.3
Potri.004G200900 Populus trichocarpa HOM05D003975 ORTHO05D009762 1.0e-27 130.2 501 31.7
Sabra15G0052100 Salix brachista HOM05D003975 ORTHO05D009762 1.8e-27 129.4 530 40.4
Sabra15G0053100 Salix brachista HOM05D003975 ORTHO05D009762 1.8e-27 129.4 530 34.5
Sabra15G0031500 Salix brachista HOM05D003975 ORTHO05D009762 3.0e-27 128.6 530 37.4
CSS0004960 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009762 2.1e-25 122.5 117 53.8
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 2.1e-25 122.5 496 36.3
Gohir.A03G058201 Gossypium hirsutum HOM05D003975 ORTHO05D009762 5.3e-24 117.9 429 67.8
Sabra15G0046400 Salix brachista HOM05D003975 ORTHO05D009762 1.5e-23 116.3 211 37.0
PGR142G2422 Punica granatum HOM05D003975 ORTHO05D009762 2.0e-23 115.9 144 43.1
Sabra15G0044600 Salix brachista HOM05D003975 ORTHO05D009762 2.0e-23 115.9 211 37.0
Sabra15G0048500 Salix brachista HOM05D003975 ORTHO05D009762 2.0e-23 115.9 211 37.0
Sabra15G0060200 Salix brachista HOM05D003975 ORTHO05D009762 2.0e-23 115.9 211 37.0
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 3.4e-23 115.2 154 43.5
Oeu023215.2 Olea europaea HOM05D003975 ORTHO05D009762 4.5e-23 114.8 117 52.1
MBI04_g11438_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009762 2.9e-22 112.1 142 43.7
Nitab4.5_0005512g0030 Nicotiana tabacum HOM05D000508 ORTHO05D000371 8.4e-22 110.5 177 85.3
Sp2g25540 Schrenkiella parvula HOM05D003975 ORTHO05D009762 1.1e-21 110.2 196 34.2
AT5G62370 Arabidopsis thaliana HOM05D003975 ORTHO05D009762 5.5e-21 107.8 204 32.4
Thhalv10003595m.g Eutrema salsugineum HOM05D003975 ORTHO05D009762 5.5e-21 107.8 195 33.8
Atru.chr1.699 Acer truncatum HOM05D003975 ORTHO05D009762 4.6e-20 104.8 115 47.0
AL8G39200 Arabidopsis lyrata HOM05D003975 ORTHO05D009762 6.0e-20 104.4 204 31.9
BolC1t02243H Brassica oleracea HOM05D003975 ORTHO05D009762 7.9e-20 104.0 191 33.5
THA.LOC104821407 Tarenaya hassleriana HOM05D003975 ORTHO05D009762 1.5e-18 99.8 171 36.3
Carub.0008s2305 Capsella rubella HOM05D003975 ORTHO05D009762 7.4e-18 97.4 204 32.4
CARHR276150 Cardamine hirsuta HOM05D003975 ORTHO05D009762 7.4e-18 97.4 205 32.7
A01p18130 Brassica napus HOM05D003975 ORTHO05D009762 2.1e-17 95.9 191 32.5
BraA01t01768Z Brassica rapa HOM05D003975 ORTHO05D009762 2.1e-17 95.9 191 32.5
C01p23090 Brassica napus HOM05D003975 ORTHO05D009762 9.0e-16 90.5 141 37.6
ATR0743G010 Amborella trichopoda HOM05D003975 ORTHO05D009762 2.6e-15 89.0 154 37.0
ATR0743G137 Amborella trichopoda HOM05D003975 ORTHO05D009762 1.3e-14 86.7 154 36.4
Nn1g01091 Nelumbo nucifera HOM05D003975 ORTHO05D009762 5.0e-14 84.7 164 33.5
CsaV3_3G016180 Cucumis sativus L. HOM05D003975 ORTHO05D009762 7.1e-13 80.9 115 40.9
Aa31LG11G1250 Aethionema arabicum HOM05D003975 ORTHO05D009762 6.1e-12 77.8 124 36.3
BcaNung03569 Brassica carinata HOM05D003975 ORTHO05D009762 3.3e-10 72.0 119 41.2
HPP92_003270 Vanilla planifolia HOM05D003975 ORTHO05D009762 4.3e-10 71.6 188 30.9
CAN.G508.18 Capsicum annuum HOM05D000002 ORTHO05D000001 9.0e-08 63.9 35 88.6
HanXRQChr16g0519091 Helianthus annuus HOM05D000001 ORTHO05D000003 4.5e-07 61.6 126 27.0
Actinidia08309 Actinidia chinensis HOM05D000598 ORTHO05D009762 3.8e-06 58.5 57 56.1
Os10g0116000 Oryza sativa ssp. japonica HOM05D003975 ORTHO05D009762 6.5e-06 57.8 96 30.2


User provided reference genes

Program Settings