Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.5e-211 739.2 361 100.0
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.8e-172 609.4 337 90.2
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.5e-134 483.4 261 91.2
Nitab4.5_0000783g0030 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.6e-115 420.2 273 80.6
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.4e-71 273.5 329 53.2
Sopen01g052330 Solanum pennellii HOM05D009034 ORTHO05D009362 1.9e-60 237.3 360 43.3
CAN.G958.3 Capsicum annuum HOM05D009034 ORTHO05D009362 2.5e-60 236.9 371 41.8
CAN.G696.2 Capsicum annuum HOM05D009034 ORTHO05D009362 3.2e-60 236.5 369 40.4
PGSC0003DMG400036424 Solanum tuberosum HOM05D009034 ORTHO05D009362 1.0e-58 231.5 362 42.5
Sopen01g051920 Solanum pennellii HOM05D009034 ORTHO05D009362 3.0e-58 229.9 336 44.3
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 3.3e-57 226.5 394 41.4
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.7e-57 225.7 332 45.2
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 4.8e-56 222.6 268 50.4
PGSC0003DMG400044507 Solanum tuberosum HOM05D009034 ORTHO05D009362 5.5e-52 209.1 339 41.0
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 3.0e-50 203.4 280 47.5
Nitab4.5_0009799g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.1e-50 202.6 277 46.2
Nitab4.5_0003603g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.9e-47 192.2 170 64.7
Solyc01g109730.1 Solanum lycopersicum HOM05D009034 ORTHO05D009362 5.9e-46 189.1 266 45.9
PGSC0003DMG400044125 Solanum tuberosum HOM05D009034 ORTHO05D009362 1.1e-44 184.9 348 40.2
Nitab4.5_0006159g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.9e-44 184.1 280 43.2
CAN.G1058.2 Capsicum annuum HOM05D009034 ORTHO05D009362 4.4e-41 172.9 324 38.0
PGSC0003DMG400036040 Solanum tuberosum HOM05D009034 ORTHO05D009362 2.2e-40 170.6 246 44.3
Nitab4.5_0009972g0050 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.9e-37 160.2 205 47.8
Nitab4.5_0004390g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.6e-35 153.3 219 45.2
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 5.3e-31 139.4 169 49.1
Peaxi162Scf00016g00068 Petunia axillaris HOM05D009034 ORTHO05D009362 9.4e-28 128.6 117 58.1
Nitab4.5_0002662g0080 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.0e-26 123.6 183 47.5
Nitab4.5_0000283g0190 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.7e-24 117.9 127 52.0
Peaxi162Scf01164g00412 Petunia axillaris HOM05D009034 ORTHO05D009362 1.7e-24 117.9 319 33.2
PGSC0003DMG400024922 Solanum tuberosum HOM05D000257 ORTHO05D004041 8.2e-24 115.5 259 35.1
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 5.0e-21 106.3 331 29.6
Sopen03g020740 Solanum pennellii HOM05D000004 ORTHO05D009362 1.9e-20 104.4 143 46.2
Nitab4.5_0000283g0270 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.6e-17 94.0 74 60.8
Nitab4.5_0002096g0090 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.6e-17 94.0 84 58.3
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 2.6e-17 94.0 290 30.0
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 7.5e-17 92.4 285 30.2
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 1.3e-16 91.7 278 32.0
Nitab4.5_0003526g0040 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.3e-16 89.4 151 41.1
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 2.0e-14 84.3 256 28.9
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 2.7e-14 84.0 192 32.3
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 3.5e-14 83.6 291 28.9
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 4.5e-14 83.2 317 28.7
PGSC0003DMG402024921 Solanum tuberosum HOM05D009034 ORTHO05D009362 3.8e-13 80.1 116 42.2
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 1.1e-12 78.6 276 30.1
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 4.2e-12 76.6 299 26.8
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 5.5e-12 76.3 282 27.7
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 1.2e-11 75.1 275 26.9
SGA_v2.0_scaffold114G32014 Striga asiatica HOM05D008179 ORTHO05D009362 2.1e-11 74.3 268 25.4
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 8.0e-11 72.4 276 29.0
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 2.3e-10 70.9 276 24.6
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 6.8e-10 69.3 285 26.7
SalBow6G4060 Salvia bowleyana HOM05D008179 ORTHO05D009362 1.2e-09 68.6 306 22.5
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 1.5e-09 68.2 346 24.6
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 1.5e-09 68.2 327 25.1
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 2.0e-09 67.8 275 27.6
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 3.4e-09 67.0 337 26.4
Oeu062972.1 Olea europaea HOM05D008179 ORTHO05D009362 1.7e-08 64.7 272 26.8
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 2.8e-08 63.9 292 28.1
Nitab4.5_0012773g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.9e-08 63.2 83 45.8
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 4.9e-08 63.2 293 21.5
Nitab4.5_0001428g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.8e-07 61.2 51 52.9
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 5.4e-07 59.7 194 27.3
Prupe.4G219800 Prunus persica HOM05D008179 ORTHO05D009362 1.2e-06 58.5 275 25.8


User provided reference genes

Program Settings