Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 4.8e-32 140.6 73 100.0
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 2.2e-29 131.7 73 89.0
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 1.6e-22 109.0 74 83.8
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 4.7e-19 97.4 63 71.4
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 8.3e-16 86.7 44 84.1
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 1.4e-15 85.9 59 78.0
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 3.2e-15 84.7 61 77.0
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 7.0e-15 83.6 44 81.8
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 9.2e-15 83.2 41 87.8
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 1.2e-14 82.8 44 81.8
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 1.2e-14 82.8 44 81.8
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 1.6e-14 82.4 58 75.9
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 1.6e-14 82.4 44 79.5
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 1.6e-14 82.4 44 79.5
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 2.0e-14 82.0 44 79.5
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 2.7e-14 81.6 44 77.3
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 2.7e-14 81.6 55 65.5
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 2.7e-14 81.6 55 65.5
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 2.7e-14 81.6 54 64.8
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 4.6e-14 80.9 59 59.3
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 7.8e-14 80.1 44 77.3
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 1.0e-13 79.7 57 59.6
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 1.0e-13 79.7 44 77.3
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 1.3e-13 79.3 64 59.4
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 1.7e-13 79.0 59 64.4
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 1.7e-13 79.0 43 76.7
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 1.7e-13 79.0 41 82.9
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 1.7e-13 79.0 44 75.0
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 2.9e-13 78.2 57 64.9
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 2.9e-13 78.2 41 82.9
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 3.9e-13 77.8 51 66.7
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 3.9e-13 77.8 54 64.8
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 8.6e-13 76.6 51 64.7
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 8.6e-13 76.6 54 59.3
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 8.6e-13 76.6 44 72.7
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 1.1e-12 76.3 41 78.0
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 1.1e-12 76.3 41 75.6
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 1.1e-12 76.3 43 76.7
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 1.9e-12 75.5 43 74.4
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 4.3e-12 74.3 43 72.1
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 4.3e-12 74.3 43 72.1
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 4.3e-12 74.3 43 72.1
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 4.3e-12 74.3 44 65.9
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 5.6e-12 73.9 43 72.1
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 5.6e-12 73.9 41 78.0
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 7.3e-12 73.6 44 68.2
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 7.3e-12 73.6 41 75.6
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 7.3e-12 73.6 44 68.2
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 7.3e-12 73.6 44 68.2
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 7.3e-12 73.6 41 73.2
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 9.5e-12 73.2 43 69.8
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 9.5e-12 73.2 43 69.8
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 9.5e-12 73.2 44 65.9
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 9.5e-12 73.2 41 73.2
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 1.6e-11 72.4 44 65.9
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 2.1e-11 72.0 41 70.7
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 2.8e-11 71.6 43 67.4
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 3.6e-11 71.2 64 50.0
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 3.6e-11 71.2 51 62.7
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 4.7e-11 70.9 69 47.8
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 6.1e-11 70.5 61 50.8
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 6.1e-11 70.5 43 67.4
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 6.1e-11 70.5 44 63.6
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 6.1e-11 70.5 49 69.4
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 1.0e-10 69.7 41 65.9
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 1.0e-10 69.7 44 72.7
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 1.4e-10 69.3 57 56.1
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 1.8e-10 68.9 43 65.1
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 1.8e-10 68.9 57 61.4
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 1.8e-10 68.9 41 68.3
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 2.3e-10 68.6 47 57.4
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 2.3e-10 68.6 40 72.5
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 3.1e-10 68.2 51 54.9
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 1.2e-09 66.2 39 66.7
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 1.5e-09 65.9 37 73.0
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.5e-09 65.9 37 73.0
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 1.5e-09 65.9 37 73.0
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 2.6e-09 65.1 41 61.0
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 2.6e-09 65.1 59 54.2
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 4.4e-09 64.3 39 69.2
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 4.4e-09 64.3 34 76.5
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 4.4e-09 64.3 34 76.5
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 7.5e-09 63.5 48 54.2
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 9.8e-09 63.2 37 67.6
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 1.7e-08 62.4 57 45.6
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 6.4e-08 60.5 34 70.6
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 6.4e-08 60.5 34 70.6
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 6.4e-08 60.5 34 70.6
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 1.4e-07 59.3 34 67.6
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 1.9e-07 58.9 32 75.0
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 4.1e-07 57.8 43 48.8
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 1.2e-06 56.2 32 65.6
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 6.0e-06 53.9 38 50.0


User provided reference genes

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