Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 4.8e-192 674.5 373 100.0
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.9e-169 599.4 373 87.7
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 6.3e-120 434.9 343 73.5
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 4.5e-118 428.7 366 73.0
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 2.5e-116 422.9 365 72.1
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 1.0e-109 401.0 365 69.9
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 1.6e-83 313.9 376 54.3
Peaxi162Scf00708g00013 Petunia axillaris HOM05D004496 ORTHO05D005513 1.9e-79 300.4 365 55.3
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 1.0e-77 294.7 384 50.8
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 2.1e-75 287.0 353 56.9
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 9.9e-73 278.1 336 55.7
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 7.1e-71 271.9 366 50.5
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 7.9e-70 268.5 375 51.2
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 8.7e-69 265.0 364 53.0
Hma1.2p1_0298F.1_g117440 Hydrangea macrophylla HOM05D004496 ORTHO05D005513 3.3e-68 263.1 387 48.8
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 4.3e-68 262.7 388 46.6
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 4.3e-68 262.7 362 52.5
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 3.7e-67 259.6 361 52.9
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 3.1e-66 256.5 375 49.1
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 9.0e-66 255.0 373 51.5
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 1.5e-65 254.2 368 49.2
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 2.6e-65 253.4 368 50.0
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 1.3e-64 251.1 365 49.6
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 2.2e-64 250.4 367 47.1
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 4.9e-64 249.2 373 49.1
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 4.2e-63 246.1 383 50.1
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 9.3e-63 245.0 371 50.1
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 3.5e-62 243.0 378 50.0
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 2.3e-61 240.4 378 47.6
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 1.9e-60 237.3 368 51.4
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.5e-60 236.9 377 47.2
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 2.5e-60 236.9 368 46.7
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 4.3e-60 236.1 377 48.3
ClCG01G021640 Citrullus lanatus HOM05D004496 ORTHO05D005513 5.6e-60 235.7 368 46.5
TAR627G0164 Trochodendron aralioides HOM05D004496 ORTHO05D005513 5.6e-60 235.7 361 48.2
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 9.6e-60 235.0 361 48.2
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 2.1e-59 233.8 396 48.5
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 4.8e-59 232.6 341 47.8
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 4.8e-59 232.6 370 50.0
Actinidia26886 Actinidia chinensis HOM05D004496 ORTHO05D005513 1.1e-58 231.5 372 48.1
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 1.4e-58 231.1 368 49.5
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 1.8e-58 230.7 391 46.8
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 3.1e-58 229.9 352 46.3
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 4.0e-58 229.6 340 49.7
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 4.0e-58 229.6 368 49.5
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 3.4e-57 226.5 344 51.7
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 7.6e-57 225.3 369 47.2
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 7.6e-57 225.3 350 49.4
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 2.2e-56 223.8 353 51.6
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 4.9e-56 222.6 352 47.4
MELO3C007420.2 Cucumis melo HOM05D004496 ORTHO05D005513 1.1e-55 221.5 355 49.0
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.1e-55 221.5 366 50.0
Lalb_Chr18g0056781 Lupinus albus HOM05D004496 ORTHO05D005513 2.5e-55 220.3 340 47.4
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 4.2e-55 219.5 351 49.6
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 5.5e-55 219.2 416 42.8
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 7.1e-55 218.8 363 46.6
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 9.3e-55 218.4 343 50.7
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 1.0e-53 214.9 345 47.5
Actinidia02342 Actinidia chinensis HOM05D004496 ORTHO05D005513 3.0e-53 213.4 364 45.6
Cfa000158 Carpinus fangiana HOM05D004496 ORTHO05D005513 3.0e-53 213.4 368 47.8
Prupe.4G014700 Prunus persica HOM05D004496 ORTHO05D005513 3.0e-53 213.4 361 47.4
Haze_06861 Corylus avellana HOM05D004496 ORTHO05D005513 3.9e-53 213.0 366 47.0
Cpa.g.sc3209.1 Carica papaya HOM05D004496 ORTHO05D005513 5.1e-53 212.6 373 44.2
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 1.9e-52 210.7 363 44.1
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 2.5e-52 210.3 363 47.1
Sabra11G0011700 Salix brachista HOM05D004496 ORTHO05D005513 2.5e-52 210.3 368 47.3
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 5.7e-52 209.1 364 49.7
TWI38G0680 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 5.7e-52 209.1 394 44.7
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 7.4e-52 208.8 379 42.2
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 9.7e-52 208.4 363 46.8
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 9.7e-52 208.4 379 42.2
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 3.7e-51 206.5 379 43.8
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 4.8e-51 206.1 341 49.0
QL05p071740 Quercus lobata HOM05D004496 ORTHO05D005513 6.3e-51 205.7 364 43.7
Lalb_Chr15g0087811 Lupinus albus HOM05D004496 ORTHO05D005513 1.8e-50 204.1 353 43.9
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 2.4e-50 203.8 375 42.7
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 5.3e-50 202.6 372 43.8
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 6.9e-50 202.2 352 49.1
Oeu007154.1 Olea europaea HOM05D004496 ORTHO05D005513 9.0e-50 201.8 333 50.2
Potri.004G003900 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.5e-49 201.1 374 48.1
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 1.5e-49 201.1 246 53.3
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 2.0e-49 200.7 380 42.4
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 1.0e-48 198.4 339 49.6
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 2.2e-48 197.2 362 46.1
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 2.9e-48 196.8 381 42.3
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 2.9e-48 196.8 381 42.3
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 2.9e-48 196.8 381 42.3
THA.LOC104806318 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 2.9e-48 196.8 375 41.6
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 5.0e-48 196.1 380 41.6
PSO832G0430 Papaver somniferum HOM05D004496 ORTHO05D005513 8.5e-48 195.3 419 41.1
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 1.4e-47 194.5 379 42.0
Lsat_1_v5_gn_4_61701 Lactuca sativa HOM05D004496 ORTHO05D005513 2.5e-47 193.7 379 42.0
MD05G1352700 Malus domestica HOM05D004496 ORTHO05D005513 2.5e-47 193.7 364 45.6
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 3.2e-47 193.4 370 41.9
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 5.5e-47 192.6 371 42.6
CDE04G1983 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 7.2e-47 192.2 355 39.2
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 7.2e-47 192.2 363 46.0
Sabra04G0002100 Salix brachista HOM05D004496 ORTHO05D005513 2.7e-46 190.3 368 44.3
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 4.6e-46 189.5 373 40.8
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 6.1e-46 189.1 365 46.0
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 1.4e-45 188.0 372 44.4
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 2.3e-45 187.2 369 42.5
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 6.7e-45 185.7 369 42.8
Gorai.009G181700 Gossypium raimondii HOM05D004496 ORTHO05D005513 8.8e-45 185.3 321 46.1
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 2.5e-44 183.7 351 41.0
Potri.006G270100 Populus trichocarpa HOM05D004496 ORTHO05D005513 3.3e-44 183.3 352 44.9
Gohir.D06G157600 Gossypium hirsutum HOM05D004496 ORTHO05D005513 7.4e-44 182.2 335 43.9
TWI63G1509 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 7.4e-44 182.2 375 44.8
Gorai.010G184200 Gossypium raimondii HOM05D004496 ORTHO05D005513 1.7e-43 181.0 335 43.9
SGA_v2.0_scaffold89G27486 Striga asiatica HOM05D004496 ORTHO05D005513 3.7e-43 179.9 403 43.4
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 8.2e-43 178.7 339 43.1
DCAR_002205 Daucus carota HOM05D004496 ORTHO05D005513 5.3e-42 176.0 368 39.7
Glyma.07G263700 Glycine max HOM05D004496 ORTHO05D005513 5.3e-42 176.0 343 40.2
Sed0016463 Sechium edule HOM05D004496 ORTHO05D005513 6.9e-42 175.6 301 42.2
Oeu003154.1 Olea europaea HOM05D004496 ORTHO05D005513 5.9e-41 172.6 351 41.0
HPP92_023384 Vanilla planifolia HOM05D004496 ORTHO05D005513 2.2e-40 170.6 359 39.3
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 2.9e-40 170.2 350 43.1
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 1.9e-39 167.5 321 41.1
MBI19_g19808_MAGBIO Magnolia biondii HOM05D004496 ORTHO05D005513 5.5e-39 166.0 400 36.0
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 7.2e-39 165.6 344 41.9
Potri.006G282500 Populus trichocarpa HOM05D004496 ORTHO05D005513 4.7e-38 162.9 365 44.1
COL.COLO4_31834 Corchorus olitorius HOM05D004496 ORTHO05D005513 1.0e-37 161.8 184 56.5
Lj4g0028181 Lotus japonicus HOM05D004496 ORTHO05D005513 1.4e-37 161.4 351 43.0
PGR004G2243 Punica granatum HOM05D004496 ORTHO05D005513 1.4e-37 161.4 363 38.3
Potri.006G282000 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.8e-37 161.0 366 43.2
Manes.17G027100 Manihot esculenta HOM05D004496 ORTHO05D005513 3.9e-37 159.8 357 41.2
AT4G22190 Arabidopsis thaliana HOM05D004496 ORTHO05D005513 1.1e-36 158.3 370 38.4
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 3.3e-36 156.8 257 44.4
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 4.4e-36 156.4 172 57.0
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 1.7e-35 154.5 232 46.1
Gohir.A06G151400 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.2e-35 154.1 288 47.6
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 1.1e-34 151.8 306 39.9
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 2.6e-33 147.1 353 38.5
Lj1P1236T60 Lonicera japonica HOM05D004496 ORTHO05D005513 8.5e-32 142.1 175 50.3
CDE07G1551 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 1.6e-30 137.9 253 38.7
Nn2g15240 Nelumbo nucifera HOM05D004496 ORTHO05D005513 2.7e-30 137.1 294 39.8
ATR0059G030 Amborella trichopoda HOM05D004496 ORTHO05D005513 2.0e-28 131.0 389 38.6
Eucgr.D01366 Eucalyptus grandis HOM05D004496 ORTHO05D005513 2.0e-28 131.0 168 50.0
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 3.3e-28 130.2 368 35.1
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 1.7e-27 127.9 251 42.2
unitig_26.g9398 Utricularia gibba HOM05D004496 ORTHO05D005513 3.5e-25 120.2 355 34.4
Medtr4g132690 Medicago truncatula HOM05D004496 ORTHO05D005513 5.9e-25 119.4 364 32.1
Ca_21060_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 1.3e-24 118.2 277 36.8
Nn1g06547 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.7e-24 117.9 131 55.0
Potri.006G283300 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.7e-24 117.9 338 39.6
unitig_749.g13622 Utricularia gibba HOM05D004496 ORTHO05D005513 2.5e-23 114.0 323 35.6
Nn3g21624 Nelumbo nucifera HOM05D004496 ORTHO05D005513 3.6e-22 110.2 323 37.5
BraA03t14400Z Brassica rapa HOM05D004496 ORTHO05D005513 2.0e-20 104.4 175 42.9
TPR.G37047 Trifolium pratense HOM05D004496 ORTHO05D005513 1.3e-19 101.7 231 37.2
HPP92_008063 Vanilla planifolia HOM05D004496 ORTHO05D005513 4.8e-19 99.8 183 40.4
Zm00001eb112850 Zea mays HOM05D004496 ORTHO05D005513 1.8e-18 97.8 363 30.6
SGA_v2.0_scaffold4G01894 Striga asiatica HOM05D004496 ORTHO05D005513 9.1e-18 95.5 358 32.4
Zm00001eb169380 Zea mays HOM05D004496 ORTHO05D005513 4.2e-15 86.7 372 33.1
unitig_748.g7579 Utricularia gibba HOM05D004496 ORTHO05D005513 1.2e-12 78.6 142 42.3
Oeu049699.1 Olea europaea HOM05D004496 ORTHO05D005513 2.6e-12 77.4 63 71.4
Os11g0497350 Oryza sativa ssp. japonica HOM05D004496 ORTHO05D005513 1.1e-10 72.0 366 33.1
Os01g0922100 Oryza sativa ssp. japonica HOM05D004496 ORTHO05D005513 1.1e-07 62.0 155 37.4
Nn2g15668 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.6e-06 58.2 103 49.5
Zm00001eb143140 Zea mays HOM05D004496 ORTHO05D005513 2.1e-06 57.8 60 58.3


User provided reference genes

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