Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 0.0e+00 1452.2 745 100.0
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 0.0e+00 1335.1 745 92.2
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 0.0e+00 1166.4 747 81.1
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 0.0e+00 1145.2 747 79.9
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 0.0e+00 1120.9 749 79.4
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 3.4e-266 921.8 602 79.4
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 1.1e-192 677.6 750 52.5
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 2.1e-191 673.3 753 52.1
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 2.9e-180 636.3 751 49.5
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 2.1e-175 620.2 748 49.5
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 6.0e-170 602.1 754 48.9
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 9.6e-168 594.7 733 49.5
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 1.1e-166 591.3 741 47.4
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 7.8e-162 575.1 753 47.0
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 1.9e-160 570.5 741 47.2
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 1.9e-160 570.5 759 46.1
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 5.3e-158 562.4 756 45.6
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 9.0e-158 561.6 739 46.4
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.5e-157 560.8 744 46.1
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 5.8e-157 558.9 742 47.8
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 9.9e-157 558.1 744 46.0
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 9.9e-157 558.1 744 45.7
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 2.2e-156 557.0 745 45.4
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 3.8e-156 556.2 744 45.4
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 1.4e-155 554.3 751 46.7
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 2.1e-154 550.4 744 45.7
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 1.3e-153 547.7 756 45.9
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 5.1e-153 545.8 746 46.9
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 4.3e-152 542.7 765 43.3
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 2.8e-151 540.0 751 45.7
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 6.9e-150 535.4 751 44.9
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 3.8e-148 529.6 762 44.6
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 4.9e-148 529.3 750 45.5
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 1.3e-145 521.2 750 44.5
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 4.3e-144 516.2 693 44.6
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 8.2e-143 511.9 753 43.4
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 1.8e-142 510.8 676 45.3
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 4.0e-142 509.6 693 44.3
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 5.3e-142 509.2 692 44.7
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 9.0e-142 508.4 705 44.3
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 7.6e-141 505.4 753 43.6
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 6.5e-140 502.3 713 43.8
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 1.6e-138 497.7 753 42.9
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 1.9e-136 490.7 757 42.5
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 5.7e-136 489.2 756 43.7
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 4.8e-135 486.1 748 41.7
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 1.1e-134 485.0 731 42.1
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 1.0e-132 478.4 716 41.8
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 1.3e-132 478.0 697 42.8
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 3.8e-132 476.5 774 41.3
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 6.5e-132 475.7 708 41.7
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 1.4e-131 474.6 710 41.8
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 3.2e-131 473.4 759 42.0
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 1.6e-130 471.1 755 41.7
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 4.6e-130 469.5 756 40.3
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 6.1e-130 469.2 754 41.1
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 7.9e-130 468.8 739 41.0
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 1.0e-129 468.4 733 42.0
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 2.3e-129 467.2 705 41.8
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 3.9e-129 466.5 717 41.7
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 3.9e-129 466.5 700 43.0
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 3.9e-129 466.5 759 40.8
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 1.1e-128 464.9 708 40.8
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 1.3e-127 461.5 757 41.7
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 2.2e-127 460.7 708 41.0
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 6.3e-127 459.1 769 40.2
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 6.3e-127 459.1 769 40.2
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 4.5e-125 453.0 753 40.0
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 1.1e-123 448.4 799 39.0
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 1.4e-123 448.0 736 42.0
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 5.5e-123 446.0 649 43.1
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 5.1e-121 439.5 829 39.8
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 2.9e-116 423.7 749 40.9
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 5.5e-115 419.5 745 40.1
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 6.8e-97 359.4 245 76.7
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 7.0e-94 349.4 300 62.7
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 9.8e-88 328.9 330 55.2
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 7.0e-86 322.8 447 46.5
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 2.7e-85 320.9 760 35.7
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 3.4e-80 303.9 543 38.3
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 4.9e-79 300.1 618 37.7
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 9.5e-75 285.8 336 49.7
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 1.8e-73 281.6 264 54.9
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 8.9e-73 279.3 261 54.0
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 1.1e-70 272.3 380 45.8
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 1.4e-54 218.8 259 47.9
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 5.4e-54 216.9 330 40.9
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 5.1e-44 183.7 104 87.5
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 2.2e-39 168.3 156 59.6
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 3.2e-38 164.5 158 56.3
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 4.0e-25 120.9 349 30.7
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 4.0e-25 120.9 191 38.7
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 2.5e-22 111.7 206 36.9
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 5.3e-17 94.0 88 52.3
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 1.0e-15 89.7 79 58.2
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 4.3e-11 74.3 255 28.6
Atru.chr10.1920 Acer truncatum HOM05D007576 ORTHO05D009576 5.9e-08 63.9 80 40.0
QL05p034837 Quercus lobata HOM05D007576 ORTHO05D009576 5.5e-06 57.4 56 50.0


User provided reference genes

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