Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 5.0e-122 441.0 210 100.0
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 8.0e-120 433.7 210 98.1
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 2.5e-113 412.1 210 92.4
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 2.5e-113 412.1 210 92.4
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 7.2e-113 410.6 210 91.4
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 2.1e-112 409.1 208 92.3
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 2.7e-112 408.7 210 91.4
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 5.0e-106 387.9 210 85.7
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 6.5e-106 387.5 208 85.6
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 9.4e-105 383.6 209 85.2
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 9.4e-105 383.6 209 84.7
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 1.6e-104 382.9 209 83.7
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 2.1e-104 382.5 209 85.2
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 2.7e-104 382.1 209 83.3
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 6.1e-104 380.9 208 85.1
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 8.0e-104 380.6 209 81.8
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 1.0e-103 380.2 209 82.3
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 1.8e-103 379.4 209 82.3
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 3.0e-103 378.6 209 82.3
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 3.0e-103 378.6 206 85.4
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 4.0e-103 378.3 209 81.8
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 5.2e-103 377.9 209 83.7
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 6.8e-103 377.5 209 81.8
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 8.8e-103 377.1 209 82.3
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 2.6e-102 375.6 209 82.3
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 2.6e-102 375.6 208 82.2
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 2.6e-102 375.6 209 82.8
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 3.4e-102 375.2 208 83.7
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 3.4e-102 375.2 209 81.3
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 4.4e-102 374.8 209 82.8
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 4.4e-102 374.8 208 83.2
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 7.5e-102 374.0 209 82.3
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 9.8e-102 373.6 198 87.4
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.3e-101 373.2 209 83.3
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.3e-101 373.2 210 83.3
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 2.8e-101 372.1 202 83.7
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 3.7e-101 371.7 209 79.9
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 3.7e-101 371.7 208 82.2
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 6.3e-101 370.9 208 81.7
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 1.1e-100 370.2 209 81.3
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 1.1e-100 370.2 208 82.7
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.4e-100 369.8 209 83.3
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 1.4e-100 369.8 208 81.7
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.8e-100 369.4 209 80.4
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 2.4e-100 369.0 208 81.2
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 4.1e-100 368.2 209 82.3
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 9.1e-100 367.1 208 82.2
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 1.2e-99 366.7 208 82.2
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 2.0e-99 365.9 209 80.9
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 3.5e-99 365.2 209 78.0
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 5.9e-99 364.4 209 81.8
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 7.7e-99 364.0 208 80.3
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 7.7e-99 364.0 208 80.3
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 1.7e-98 362.8 208 80.3
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 2.3e-98 362.5 231 75.3
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 2.3e-98 362.5 208 78.4
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 2.9e-98 362.1 208 81.7
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 3.8e-98 361.7 208 80.3
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 5.0e-98 361.3 207 80.7
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 6.6e-98 360.9 206 81.1
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.1e-97 360.1 208 81.2
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 1.5e-97 359.8 209 77.0
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.9e-97 359.4 208 81.2
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 2.5e-97 359.0 207 79.2
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 2.5e-97 359.0 208 79.8
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.5e-97 359.0 209 79.9
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 4.2e-97 358.2 206 80.1
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 4.2e-97 358.2 206 80.1
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 4.2e-97 358.2 210 79.0
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 5.5e-97 357.8 206 80.1
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 5.5e-97 357.8 206 80.6
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 5.5e-97 357.8 209 78.5
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 5.5e-97 357.8 208 80.8
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 7.2e-97 357.5 208 77.4
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 7.2e-97 357.5 208 79.3
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 9.5e-97 357.1 206 79.6
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 1.6e-96 356.3 209 78.5
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 1.6e-96 356.3 206 79.6
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 1.6e-96 356.3 217 80.2
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 2.1e-96 355.9 208 78.8
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 2.1e-96 355.9 202 81.2
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.8e-96 355.5 209 78.0
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 3.6e-96 355.1 193 84.5
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 3.6e-96 355.1 229 73.4
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 1.0e-95 353.6 199 82.4
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 1.4e-95 353.2 208 79.3
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 2.3e-95 352.4 204 79.9
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 2.3e-95 352.4 208 78.8
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 3.0e-95 352.1 204 79.4
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 5.2e-95 351.3 204 79.4
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 1.2e-94 350.1 204 79.4
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.2e-94 350.1 199 81.9
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 2.0e-94 349.4 208 77.4
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 3.4e-94 348.6 209 76.6
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 3.4e-94 348.6 206 77.2
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 5.7e-94 347.8 198 81.8
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 5.7e-94 347.8 209 75.6
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 9.8e-94 347.1 198 81.8
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 1.3e-93 346.7 208 77.9
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.7e-93 346.3 198 81.3
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.7e-93 346.3 206 76.2
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 2.8e-93 345.5 209 75.6
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 3.7e-93 345.1 204 78.4
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 3.7e-93 345.1 209 75.6
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 6.3e-93 344.4 208 75.5
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 2.4e-92 342.4 209 74.6
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 5.9e-91 337.8 295 59.7
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 7.8e-91 337.4 204 74.0
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 2.9e-90 335.5 205 72.7
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 7.3e-89 330.9 208 72.6
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 3.6e-88 328.6 209 75.1
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 8.9e-87 323.9 249 66.3
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 2.6e-86 322.4 201 70.6
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 2.6e-86 322.4 207 70.5
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 9.8e-86 320.5 207 70.5
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 3.2e-84 315.5 174 84.5
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.6e-83 313.2 199 75.4
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 7.8e-83 310.8 166 84.3
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 1.2e-80 303.5 169 83.4
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 8.1e-72 274.2 424 40.3
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 3.7e-69 265.4 145 82.1
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 2.4e-68 262.7 145 80.7
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 1.2e-67 260.4 208 61.5
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 7.8e-67 257.7 145 80.7
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 2.5e-65 252.7 172 69.8
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 5.8e-54 214.9 140 68.6
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 2.9e-53 212.6 113 83.2
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 1.9e-49 199.9 209 48.3
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 1.5e-46 190.3 194 49.5
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 7.6e-46 188.0 125 71.2
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 3.8e-45 185.7 109 80.7
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 2.1e-40 169.9 92 82.6
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 6.9e-39 164.9 98 81.6
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 4.5e-38 162.2 167 51.5
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 8.4e-37 157.9 195 42.6
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 1.0e-34 151.0 95 75.8
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 5.1e-34 148.7 74 86.5
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 1.7e-29 133.7 79 79.7
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 1.5e-22 110.5 74 71.6
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 1.5e-22 110.5 65 80.0
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 7.9e-19 98.2 63 74.6
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.8e-18 97.1 60 78.3
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 1.8e-18 97.1 59 78.0
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 9.4e-12 74.7 60 71.7
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 3.9e-10 69.3 35 80.0
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 1.1e-09 67.8 40 77.5
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 2.6e-09 66.6 35 82.9
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 5.3e-07 58.9 32 81.2


User provided reference genes

Program Settings