Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 3.6e-79 298.1 144 100.0
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 2.5e-56 222.2 145 75.9
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 4.4e-53 211.5 152 71.7
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 3.7e-52 208.4 152 70.4
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 1.1e-51 206.8 152 70.4
CAN.G578.4 Capsicum annuum HOM05D008409 ORTHO05D010483 2.4e-51 205.7 143 70.6
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 2.5e-48 195.7 148 65.5
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 2.1e-47 192.6 148 61.5
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 2.8e-47 192.2 148 60.8
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 1.4e-46 189.9 148 63.5
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 1.4e-46 189.9 148 60.8
Thecc.02G180200 Theobroma cacao HOM05D008409 ORTHO05D010483 2.3e-46 189.1 148 64.9
GSVIVG01020550001 Vitis vinifera HOM05D008409 ORTHO05D010483 4.0e-46 188.3 148 64.9
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 1.2e-45 186.8 148 59.5
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 1.2e-45 186.8 148 61.5
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 1.2e-45 186.8 148 64.9
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 4.4e-45 184.9 148 63.5
Actinidia11031 Actinidia chinensis HOM05D008409 ORTHO05D010483 9.8e-45 183.7 148 61.5
Atru.chr6.2992 Acer truncatum HOM05D008409 ORTHO05D010483 1.3e-44 183.3 148 62.2
Ciclev10017070m.g Citrus clementina HOM05D008409 ORTHO05D010483 1.7e-44 183.0 148 63.5
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 2.2e-44 182.6 151 61.6
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 3.7e-44 181.8 148 59.5
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 3.7e-44 181.8 145 63.4
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 3.2e-43 178.7 145 60.7
Gohir.A04G103600 Gossypium hirsutum HOM05D008409 ORTHO05D010483 4.1e-43 178.3 149 59.7
Gorai.012G128600 Gossypium raimondii HOM05D008409 ORTHO05D010483 5.4e-43 177.9 149 59.7
MD09G1247200 Malus domestica HOM05D008409 ORTHO05D010483 3.5e-42 175.3 148 62.2
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 1.3e-41 173.3 149 59.1
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 2.3e-41 172.6 149 59.1
PSO675G8696 Papaver somniferum HOM05D008409 ORTHO05D010483 5.6e-40 167.9 146 61.0
Os08g0374000 Oryza sativa ssp. japonica HOM05D008409 ORTHO05D010483 9.5e-40 167.2 148 54.7
TWI36G0630 Tripterygium wilfordii HOM05D008409 ORTHO05D010483 2.1e-39 166.0 148 56.1
COL.COLO4_30195 Corchorus olitorius HOM05D008409 ORTHO05D010483 6.2e-39 164.5 135 62.2
ATR0737G133 Amborella trichopoda HOM05D008409 ORTHO05D010483 2.3e-38 162.5 144 54.9
MBI06_g04179_MAGBIO Magnolia biondii HOM05D008409 ORTHO05D010483 2.3e-38 162.5 145 57.2
PSO541G0816 Papaver somniferum HOM05D008409 ORTHO05D010483 4.0e-38 161.8 146 58.9
CSS0031688 Camellia sinensis var. sinensis HOM05D008409 ORTHO05D010483 8.6e-33 144.1 143 56.6
Dinv23634 Davidia involucrata HOM05D008409 ORTHO05D010483 3.6e-31 138.7 101 67.3
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 9.9e-29 130.6 153 45.1
vmacro12306 Vaccinium macrocarpon HOM05D008409 ORTHO05D010483 1.6e-26 123.2 115 55.7
QL08p038938 Quercus lobata HOM05D008409 ORTHO05D010483 1.2e-18 97.1 83 59.0
Pp3c2_27350 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.7e-10 69.3 134 31.3
HPP92_015289 Vanilla planifolia HOM05D000197 ORTHO05D000114 3.5e-10 68.9 137 32.8
Ca_04619_v3 Cicer arietinum L. HOM05D000197 ORTHO05D000114 4.6e-10 68.6 155 30.3
HPP92_010019 Vanilla planifolia HOM05D000197 ORTHO05D000114 4.6e-10 68.6 137 32.8
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 1.8e-09 66.6 146 29.5
Hma1.2p1_1017F.1_g248290 Hydrangea macrophylla HOM05D000197 ORTHO05D000114 3.0e-09 65.9 137 29.9
MBI15_g00934_MAGBIO Magnolia biondii HOM05D000197 ORTHO05D000114 3.0e-09 65.9 122 33.6
Nn4g22865 Nelumbo nucifera HOM05D000197 ORTHO05D000114 3.0e-09 65.9 150 28.7
Eucgr.B02546 Eucalyptus grandis HOM05D000197 ORTHO05D000114 5.1e-09 65.1 141 30.5
Pp3c13_23010 Physcomitrium patens HOM05D012277 ORTHO05D010483 5.1e-09 65.1 127 33.9
Pp3c13_23030 Physcomitrium patens HOM05D012277 ORTHO05D010483 5.1e-09 65.1 127 33.9
SEGI_09675 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 6.7e-09 64.7 144 27.8
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 8.7e-09 64.3 130 30.0
SMO347G0071 Selaginella moellendorffii HOM05D008409 ORTHO05D010483 2.5e-08 62.8 152 28.9
Pp3c7_19830 Physcomitrium patens HOM05D012277 ORTHO05D010483 7.4e-08 61.2 134 28.4
Pp3c7_19850 Physcomitrium patens HOM05D012277 ORTHO05D010483 7.4e-08 61.2 134 28.4
Pp3c11_13210 Physcomitrium patens HOM05D012277 ORTHO05D010483 9.6e-08 60.8 136 30.9
Pp3c1_10460 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.8e-07 59.3 136 30.9
Os04g0465600 Oryza sativa ssp. japonica HOM05D000197 ORTHO05D000114 8.1e-07 57.8 157 28.0
SMO337G0049 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 8.1e-07 57.8 96 27.1
Thecc.05G206600 Theobroma cacao HOM05D000322 ORTHO05D000186 8.1e-07 57.8 84 41.7
Thecc.05G206800 Theobroma cacao HOM05D000322 ORTHO05D000186 1.4e-06 57.0 84 39.3
Thecc.02G223000 Theobroma cacao HOM05D000322 ORTHO05D000186 2.4e-06 56.2 147 29.3
Duzib151G0027 Durio zibethinus HOM05D000322 ORTHO05D000186 3.1e-06 55.8 84 36.9
Thecc.04G292100 Theobroma cacao HOM05D000322 ORTHO05D000186 5.3e-06 55.1 147 28.6
Duzib151G0708 Durio zibethinus HOM05D000322 ORTHO05D000186 6.9e-06 54.7 145 30.3
Thecc.04G292600 Theobroma cacao HOM05D000322 ORTHO05D000186 6.9e-06 54.7 89 37.1
Thecc.05G207000 Theobroma cacao HOM05D000322 ORTHO05D000186 6.9e-06 54.7 84 35.7
Duzib151G0374 Durio zibethinus HOM05D000322 ORTHO05D000186 9.0e-06 54.3 84 35.7
Duzib151G0600 Durio zibethinus HOM05D000322 ORTHO05D000186 9.0e-06 54.3 84 35.7


User provided reference genes

Program Settings