Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 7.3e-203 710.3 347 100.0
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.1e-158 563.5 306 91.2
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 1.5e-147 526.6 312 84.9
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 3.7e-146 521.9 312 84.0
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 1.8e-145 519.6 312 83.7
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 7.7e-144 514.2 312 83.3
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 7.0e-129 464.5 312 74.0
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.2e-128 463.8 306 75.2
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 2.0e-128 463.0 308 74.0
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 4.5e-128 461.8 312 73.4
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.0e-127 460.7 306 74.5
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 2.2e-127 459.5 310 72.6
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 6.5e-127 458.0 314 73.6
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 8.5e-127 457.6 317 71.3
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 1.4e-126 456.8 310 74.5
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 1.9e-126 456.4 351 66.4
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 4.2e-126 455.3 302 74.8
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 7.2e-126 454.5 302 74.8
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 9.4e-126 454.1 290 74.8
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 1.6e-125 453.4 303 71.9
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 2.7e-125 452.6 291 74.9
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 8.0e-125 451.1 299 72.6
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 8.0e-125 451.1 312 71.5
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 1.0e-124 450.7 303 71.9
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 1.8e-124 449.9 303 71.3
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 2.3e-124 449.5 287 74.9
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 3.0e-124 449.1 312 70.8
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 3.0e-124 449.1 308 73.7
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 8.8e-124 447.6 299 72.9
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 8.8e-124 447.6 303 71.9
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 8.8e-124 447.6 301 72.1
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 1.5e-123 446.8 303 73.3
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 1.5e-123 446.8 312 71.5
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 1.5e-123 446.8 306 72.9
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 2.6e-123 446.0 304 71.1
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 4.4e-123 445.3 293 72.4
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 5.7e-123 444.9 303 70.3
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 5.7e-123 444.9 303 70.3
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 5.7e-123 444.9 299 72.6
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 7.4e-123 444.5 290 73.4
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 9.7e-123 444.1 292 78.1
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 1.3e-122 443.7 313 70.3
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 1.3e-122 443.7 303 71.0
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 1.3e-122 443.7 304 70.4
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 1.3e-122 443.7 323 70.3
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 2.8e-122 442.6 291 72.9
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 2.8e-122 442.6 304 72.7
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 4.8e-122 441.8 304 70.1
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 6.3e-122 441.4 303 71.3
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 6.3e-122 441.4 311 69.8
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 1.1e-121 440.7 302 72.2
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 1.4e-121 440.3 302 71.2
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 2.4e-121 439.5 291 72.2
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 3.1e-121 439.1 304 70.1
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 4.1e-121 438.7 300 71.0
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 4.1e-121 438.7 302 71.5
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 7.0e-121 438.0 305 70.8
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 2.0e-120 436.4 306 70.9
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 2.0e-120 436.4 313 68.1
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 2.6e-120 436.0 312 67.9
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 3.5e-120 435.6 297 73.1
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 4.5e-120 435.3 306 69.9
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 7.7e-120 434.5 303 71.0
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 7.7e-120 434.5 312 69.9
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.3e-119 433.7 306 70.3
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 2.2e-119 433.0 303 71.0
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 8.5e-119 431.0 301 70.1
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 7.2e-118 427.9 311 67.2
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 7.2e-118 427.9 302 68.9
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 9.4e-118 427.6 301 68.1
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 2.1e-117 426.4 285 73.7
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 3.6e-117 425.6 316 68.0
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 3.0e-116 422.5 302 67.2
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 4.0e-116 422.2 264 75.8
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 4.0e-116 422.2 401 57.4
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 8.8e-116 421.0 302 69.5
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 3.4e-115 419.1 284 70.8
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 3.7e-114 415.6 299 67.6
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 3.7e-114 415.6 279 71.7
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 3.7e-114 415.6 299 67.6
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 4.8e-114 415.2 302 67.5
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 1.1e-113 414.1 237 81.9
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 1.4e-113 413.7 305 67.5
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 3.1e-113 412.5 314 65.9
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 7.0e-113 411.4 305 65.2
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 9.1e-113 411.0 301 67.1
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 9.1e-113 411.0 281 69.8
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 2.2e-111 406.4 302 65.6
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 5.0e-111 405.2 301 66.8
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 9.8e-107 391.0 312 64.1
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 1.7e-106 390.2 316 64.6
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 2.9e-103 379.4 311 63.0
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 1.6e-101 373.6 299 62.9
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 1.2e-99 367.5 325 58.8
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.5e-99 367.1 268 67.5
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 5.7e-99 365.2 281 63.3
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 1.8e-97 360.1 254 69.7
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 9.8e-91 337.8 216 76.9
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 1.1e-89 334.3 269 61.7
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 2.4e-89 333.2 215 76.3
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 1.6e-88 330.5 265 59.2
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 5.6e-86 322.0 291 58.4
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 9.5e-86 321.2 255 63.1
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 2.0e-83 313.5 243 66.7
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 7.1e-81 305.1 206 72.8
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 7.1e-81 305.1 206 72.3
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 1.2e-77 294.3 252 59.9
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 9.6e-70 268.1 199 67.3
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 9.9e-67 258.1 305 48.9
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 9.0e-60 235.0 273 44.3
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 7.6e-59 231.9 263 46.8
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 1.5e-54 217.6 184 60.3
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 2.8e-53 213.4 272 47.4
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.0e-51 207.2 134 73.1
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.6e-48 197.6 147 67.3
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.1e-46 191.4 267 42.3
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.5e-46 191.0 305 43.0
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 3.1e-36 156.8 85 84.7
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 3.8e-34 149.8 97 70.1
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 3.0e-31 140.2 107 61.7
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.1e-30 138.3 66 90.9
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 1.9e-30 137.5 162 50.0
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 4.8e-29 132.9 66 84.8
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 1.5e-14 84.7 56 71.4
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 2.6e-14 84.0 77 55.8
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 1.5e-09 68.2 61 59.0
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.0e-07 62.0 40 72.5
Cpa.g.sc3814.1 Carica papaya HOM05D006150 ORTHO05D007745 3.3e-06 57.0 35 74.3


User provided reference genes

Program Settings