Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009435g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.3e-63 246.1 117 100.0
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.4e-25 119.0 58 87.9
Nitab4.5_0000381g0280 Nicotiana tabacum HOM05D009794 ORTHO05D000309 5.4e-25 117.9 58 87.9
Nitab4.5_0000682g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.6e-24 116.3 58 89.7
Nitab4.5_0016516g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.6e-24 114.8 58 84.5
Nitab4.5_0001759g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.0e-23 113.6 58 84.5
Nitab4.5_0002918g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.3e-23 113.2 57 84.2
Nitab4.5_0002980g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.7e-23 112.8 58 86.2
Nitab4.5_0000073g0140 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.0e-23 112.1 58 84.5
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.0e-23 112.1 58 82.8
Nitab4.5_0000270g0070 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.9e-23 111.7 58 82.8
Nitab4.5_0000128g0210 Nicotiana tabacum HOM05D009794 ORTHO05D000309 5.0e-23 111.3 52 90.4
Nitab4.5_0000337g0240 Nicotiana tabacum HOM05D009794 ORTHO05D000309 9.5e-22 107.1 53 84.9
Nitab4.5_0000299g0230 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.8e-20 102.8 50 88.0
Nitab4.5_0002330g0150 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.8e-20 102.8 59 76.3
Nitab4.5_0004685g0020 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.6e-19 99.0 58 72.4
Nitab4.5_0011105g0020 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.9e-18 95.5 49 83.7
Peaxi162Scf00145g00107 Petunia axillaris HOM05D001383 ORTHO05D000309 3.4e-11 72.0 50 60.0
Nitab4.5_0011168g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.4e-10 67.8 34 85.3
Peaxi162Scf00075g00085 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-09 65.9 53 54.7
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-09 65.9 53 54.7
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-09 65.9 53 54.7
Peaxi162Scf00147g01910 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-09 65.5 53 52.8
Peaxi162Scf00063g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 4.1e-09 65.1 53 54.7
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-08 63.2 53 52.8
Peaxi162Scf00884g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-08 63.2 53 52.8
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 3.5e-08 62.0 37 62.2
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 3.5e-08 62.0 37 62.2
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.5e-08 62.0 37 62.2
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 4.6e-08 61.6 37 62.2
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 7.8e-08 60.8 56 44.6
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 7.8e-08 60.8 56 44.6
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 7.8e-08 60.8 56 44.6
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 7.8e-08 60.8 56 44.6
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 7.8e-08 60.8 56 44.6
Peaxi162Scf00101g00219 Petunia axillaris HOM05D001383 ORTHO05D000309 1.0e-07 60.5 56 50.0
PGSC0003DMG402006646 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.0e-07 60.5 38 65.8
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 1.3e-07 60.1 58 48.3
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 1.3e-07 60.1 58 48.3
Nitab4.5_0007977g0060 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.3e-07 60.1 64 46.9
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.7e-07 59.7 37 59.5
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.7e-07 59.7 37 59.5
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.7e-07 59.7 42 54.8
Peaxi162Scf00331g00022 Petunia axillaris HOM05D009794 ORTHO05D000309 3.0e-07 58.9 53 49.1
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 3.9e-07 58.5 60 48.3
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 5.1e-07 58.2 56 42.9
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 6.6e-07 57.8 56 42.9
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 8.6e-07 57.4 58 44.8
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 8.6e-07 57.4 58 48.3
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 8.6e-07 57.4 51 49.0
CAN.G275.3 Capsicum annuum HOM05D009408 ORTHO05D004497 1.1e-06 57.0 34 61.8
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.1e-06 57.0 66 42.4
Nitab4.5_0000216g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.1e-06 57.0 67 41.8
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 1.5e-06 56.6 34 61.8
Solyc03g096303.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.5e-06 56.6 37 56.8
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-06 56.2 60 46.7
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.9e-06 56.2 60 46.7
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.9e-06 56.2 45 46.7
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 2.5e-06 55.8 68 42.6
Peaxi162Scf00368g00111 Petunia axillaris HOM05D001383 ORTHO05D000309 2.5e-06 55.8 56 41.1
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 2.5e-06 55.8 53 47.2
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.5e-06 55.8 57 40.4
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 3.3e-06 55.5 50 50.0
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 3.3e-06 55.5 51 47.1
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 3.3e-06 55.5 51 47.1
CAN.G490.13 Capsicum annuum HOM05D009408 ORTHO05D000309 4.3e-06 55.1 34 58.8
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.3e-06 55.1 57 43.9
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 5.6e-06 54.7 34 58.8
Hma1.2p1_0825F.1_g224740 Hydrangea macrophylla HOM05D015331 ORTHO05D000309 5.6e-06 54.7 51 43.1
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 5.6e-06 54.7 60 46.7
CAN.G781.1 Capsicum annuum HOM05D009408 ORTHO05D000309 7.3e-06 54.3 43 51.2
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 7.3e-06 54.3 58 41.4
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 9.5e-06 53.9 34 58.8
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 9.5e-06 53.9 36 55.6
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 9.5e-06 53.9 46 50.0
Prupe.5G025800 Prunus persica HOM05D001383 ORTHO05D000309 9.5e-06 53.9 50 48.0


User provided reference genes

Program Settings