Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009427g0030 Nicotiana tabacum HOM05D000160 ORTHO05D044659 3.5e-57 225.3 120 100.0
Nitab4.5_0000069g0110 Nicotiana tabacum HOM05D000160 ORTHO05D000914 1.2e-49 200.3 120 90.0
PGSC0003DMG400021290 Solanum tuberosum HOM05D000160 ORTHO05D000914 3.3e-31 139.0 108 68.5
Sopen10g003540 Solanum pennellii HOM05D000160 ORTHO05D000914 6.3e-30 134.8 108 64.8
Solyc10g007630.1 Solanum lycopersicum HOM05D000160 ORTHO05D000914 2.4e-29 132.9 108 64.8
Peaxi162Scf00612g00012 Petunia axillaris HOM05D000160 ORTHO05D000914 2.8e-22 109.4 75 73.3
Nitab4.5_0007864g0010 Nicotiana tabacum HOM05D000439 ORTHO05D002302 4.5e-20 102.1 97 56.7
Nitab4.5_0012670g0010 Nicotiana tabacum HOM05D000439 ORTHO05D036904 2.2e-19 99.8 97 54.6
Nitab4.5_0004296g0020 Nicotiana tabacum HOM05D000439 ORTHO05D002302 6.5e-19 98.2 80 60.0
Nitab4.5_0001453g0030 Nicotiana tabacum HOM05D000439 ORTHO05D002302 4.2e-18 95.5 78 59.0
Peaxi162Scf00394g01016 Petunia axillaris HOM05D000439 ORTHO05D002302 4.2e-18 95.5 136 44.1
Lj7C482G14 Lonicera japonica HOM05D000439 ORTHO05D002302 8.8e-16 87.8 81 58.0
Rhsim01G0002600 Rhododendron simsii HOM05D000439 ORTHO05D001363 1.2e-15 87.4 110 46.4
Peaxi162Scf00225g00521 Petunia axillaris HOM05D000439 ORTHO05D002302 1.4e-13 80.5 132 46.2
Nitab4.5_0001165g0180 Nicotiana tabacum HOM05D000439 ORTHO05D002302 9.1e-13 77.8 131 41.2
CSS0036023 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D002302 8.5e-11 71.2 117 40.2
Cc02_g32360 Coffea canephora HOM05D000160 ORTHO05D044659 1.1e-10 70.9 105 38.1
CAN.G904.15 Capsicum annuum HOM05D000160 ORTHO05D000914 1.2e-09 67.4 54 57.4
Dinv26587 Davidia involucrata HOM05D000439 ORTHO05D002302 2.1e-09 66.6 120 35.8
Cc00_g28160 Coffea canephora HOM05D000160 ORTHO05D000914 5.2e-08 62.0 117 33.3
vmacro05061 Vaccinium macrocarpon HOM05D000439 ORTHO05D002302 2.2e-06 56.6 76 40.8
Sopen01g041820 Solanum pennellii HOM05D000439 ORTHO05D002302 3.7e-06 55.8 120 35.0


User provided reference genes

Program Settings