Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.4e-117 426.4 239 100.0
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 3.3e-98 362.1 240 85.0
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 6.5e-86 321.2 240 75.8
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 1.9e-85 319.7 240 75.4
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 1.8e-83 313.2 240 74.2
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 5.8e-58 228.4 240 61.7
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 7.8e-47 191.4 253 52.6
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 3.5e-39 166.0 208 52.4
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 1.3e-38 164.1 213 53.5
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 3.9e-38 162.5 188 58.0
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 4.8e-36 155.6 267 46.1
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 1.1e-35 154.5 218 49.1
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 2.4e-35 153.3 261 45.6
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 3.1e-35 152.9 199 51.8
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 9.0e-35 151.4 201 50.7
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 2.6e-34 149.8 245 46.1
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 1.7e-33 147.1 252 45.2
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 1.7e-33 147.1 252 44.8
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.9e-33 146.4 237 44.3
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 3.8e-33 146.0 241 46.5
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 4.9e-33 145.6 232 45.7
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 4.9e-33 145.6 187 50.8
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 8.4e-33 144.8 238 47.1
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 8.4e-33 144.8 262 46.2
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 1.1e-32 144.4 128 63.3
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.9e-32 143.7 255 43.5
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 5.4e-32 142.1 183 51.4
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.6e-31 140.6 213 49.3
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.6e-31 140.6 240 45.8
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.1e-31 140.2 234 44.4
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.7e-31 139.8 111 77.5
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 2.7e-31 139.8 184 52.2
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 4.6e-31 139.0 168 53.6
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 6.0e-31 138.7 183 48.6
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 7.9e-31 138.3 189 50.8
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 1.3e-30 137.5 202 49.0
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.8e-30 137.1 166 53.6
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.8e-30 137.1 215 47.0
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.8e-30 137.1 196 47.4
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 2.3e-30 136.7 204 47.5
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 2.3e-30 136.7 198 50.0
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 3.9e-30 136.0 211 49.8
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 3.9e-30 136.0 177 49.7
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 5.1e-30 135.6 284 39.8
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 6.7e-30 135.2 168 54.2
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 2.5e-29 133.3 237 43.5
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 4.3e-29 132.5 217 45.2
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 5.6e-29 132.1 246 42.7
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 5.6e-29 132.1 181 52.5
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 7.4e-29 131.7 127 57.5
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 9.6e-29 131.3 232 46.1
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.3e-28 131.0 181 51.9
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.6e-28 130.6 197 47.2
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 2.1e-28 130.2 166 48.8
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 2.1e-28 130.2 262 43.9
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 2.1e-28 130.2 192 52.1
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 3.7e-28 129.4 237 46.8
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 8.1e-28 128.3 245 42.9
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.1e-27 127.9 248 44.0
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.4e-27 127.5 261 43.3
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 1.8e-27 127.1 183 48.1
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 4.0e-27 125.9 186 49.5
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 5.3e-27 125.6 208 44.7
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 5.3e-27 125.6 165 52.1
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 1.5e-26 124.0 164 47.6
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 2.6e-26 123.2 214 44.9
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 5.8e-26 122.1 181 48.6
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 7.6e-26 121.7 168 50.0
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 7.6e-26 121.7 251 40.6
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 1.3e-25 120.9 226 42.0
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 1.7e-25 120.6 203 45.3
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 1.7e-25 120.6 226 41.6
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 2.2e-25 120.2 263 41.1
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 2.9e-25 119.8 232 41.8
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 3.8e-25 119.4 229 43.2
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 3.8e-25 119.4 168 54.2
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 4.9e-25 119.0 215 43.7
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 1.1e-24 117.9 226 41.6
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 1.9e-24 117.1 220 44.1
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 1.9e-24 117.1 229 41.0
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.9e-24 117.1 138 54.3
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 2.4e-24 116.7 226 42.9
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 3.2e-24 116.3 200 42.5
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 5.5e-24 115.5 218 42.7
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 7.1e-24 115.2 228 40.8
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 7.1e-24 115.2 162 51.2
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 9.3e-24 114.8 227 40.1
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 2.7e-23 113.2 91 63.7
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 2.7e-23 113.2 119 57.1
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 4.6e-23 112.5 221 41.6
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.0e-22 111.3 195 43.1
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.3e-22 110.9 227 40.5
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 8.7e-22 108.2 165 46.1
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.1e-21 107.8 218 41.7
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.5e-21 107.5 260 40.0
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 4.3e-21 105.9 292 34.2
CAN.G128.21 Capsicum annuum HOM05D005915 ORTHO05D007239 5.6e-21 105.5 90 65.6
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 4.8e-20 102.4 200 40.5
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 3.4e-18 96.3 172 44.2
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 5.8e-18 95.5 134 48.5
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 5.8e-18 95.5 221 38.0
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 7.6e-18 95.1 232 39.2
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 7.6e-18 95.1 188 37.8
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 1.7e-17 94.0 180 43.9
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 6.5e-17 92.0 96 61.5
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 6.5e-17 92.0 151 47.7
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 3.0e-14 83.2 156 41.7
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 5.1e-14 82.4 82 56.1
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.3e-12 77.8 244 33.6
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 1.3e-12 77.8 108 52.8
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 1.4e-11 74.3 211 34.1
Nitab4.5_0000130g0160 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.4e-11 73.6 156 40.4
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 6.9e-11 72.0 111 48.6
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.2e-10 71.2 109 41.3
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 3.4e-10 69.7 231 30.7
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 1.7e-09 67.4 95 47.4
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.5e-08 63.5 99 44.4
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 3.2e-08 63.2 34 82.4
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 9.4e-08 61.6 99 39.4
Ah.05g171290 Amaranthus hybridus HOM05D005915 ORTHO05D007239 7.9e-07 58.5 80 48.8
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 1.0e-06 58.2 110 35.5


User provided reference genes

Program Settings