Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009398g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 1.5e-68 262.7 132 100.0
Sopen02g011120 Solanum pennellii HOM05D003074 ORTHO05D002434 4.1e-21 105.1 107 59.8
PGSC0003DMG400019879 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.5e-20 103.2 107 58.9
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.7e-11 73.2 124 40.3
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 2.5e-10 69.3 128 40.6
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.2e-10 68.6 121 38.8
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 5.5e-10 68.2 125 38.4
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 9.4e-10 67.4 132 37.1
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 9.4e-10 67.4 121 43.0
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 1.6e-09 66.6 117 37.6
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 2.7e-09 65.9 130 35.4
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 3.6e-09 65.5 117 37.6
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 8.0e-09 64.3 134 38.8
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 8.0e-09 64.3 129 38.0
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 1.0e-08 63.9 109 42.2
Sabra16G0289700 Salix brachista HOM05D003074 ORTHO05D002434 1.4e-08 63.5 119 38.7
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 1.8e-08 63.2 111 32.4
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 4.0e-08 62.0 113 38.1
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 4.0e-08 62.0 117 37.6
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 4.0e-08 62.0 119 35.3
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.0e-08 62.0 130 36.2
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 5.2e-08 61.6 127 38.6
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 6.7e-08 61.2 131 38.2
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 6.7e-08 61.2 108 39.8
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 6.7e-08 61.2 108 39.8
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 6.7e-08 61.2 121 34.7
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 8.8e-08 60.8 130 35.4
Sopen03g005540 Solanum pennellii HOM05D037882 ORTHO05D002434 1.2e-07 60.5 127 37.0
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.5e-07 60.1 137 33.6
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 1.5e-07 60.1 129 36.4
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 1.5e-07 60.1 123 36.6
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.5e-07 60.1 123 36.6
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 2.0e-07 59.7 144 34.7
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.0e-07 59.7 137 33.6
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 2.0e-07 59.7 133 36.1
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 2.0e-07 59.7 124 36.3
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 2.6e-07 59.3 122 36.1
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.3e-07 58.9 118 32.2
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 3.3e-07 58.9 125 37.6
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 3.3e-07 58.9 118 33.9
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 3.3e-07 58.9 124 37.1
AUR62020444 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.4e-07 58.5 115 33.0
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 4.4e-07 58.5 127 32.3
AUR62015774 Chenopodium quinoa HOM05D003074 ORTHO05D002434 7.5e-07 57.8 115 29.6
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 7.5e-07 57.8 116 31.9
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 7.5e-07 57.8 139 33.8
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 7.5e-07 57.8 128 35.2
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 7.5e-07 57.8 117 37.6
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 9.7e-07 57.4 123 35.8
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 9.7e-07 57.4 138 34.8
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 9.7e-07 57.4 133 35.3
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 9.7e-07 57.4 109 34.9
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 9.7e-07 57.4 119 35.3
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 1.7e-06 56.6 128 34.4
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 1.7e-06 56.6 122 33.6
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 2.2e-06 56.2 107 36.4
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 3.7e-06 55.5 70 52.9
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 3.7e-06 55.5 128 34.4
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.7e-06 55.5 128 32.8
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 3.7e-06 55.5 128 35.2
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.7e-06 55.5 119 34.5
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.7e-06 55.5 125 36.0
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 3.7e-06 55.5 115 36.5
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.8e-06 55.1 115 32.2
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 4.8e-06 55.1 109 37.6
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 4.8e-06 55.1 136 36.8
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.3e-06 54.7 127 37.0
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 6.3e-06 54.7 127 37.0
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 6.3e-06 54.7 108 39.8
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 6.3e-06 54.7 109 37.6
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 8.2e-06 54.3 141 28.4
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 8.2e-06 54.3 125 37.6
PGSC0003DMG400005078 Solanum tuberosum HOM05D003074 ORTHO05D002434 8.2e-06 54.3 72 48.6


User provided reference genes

Program Settings