Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 5.6e-33 143.7 72 100.0
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 4.2e-28 127.5 72 88.9
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 6.0e-27 123.6 72 87.5
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 8.7e-26 119.8 66 87.9
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 1.1e-25 119.4 66 86.4
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.9e-25 118.6 66 86.4
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 9.6e-25 116.3 72 79.2
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 3.7e-24 114.4 72 77.8
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 4.8e-24 114.0 72 73.6
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 6.2e-24 113.6 72 73.6
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 1.1e-23 112.8 72 70.8
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.4e-23 111.7 72 75.0
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 4.0e-23 110.9 72 72.2
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 4.0e-23 110.9 72 72.2
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 5.3e-23 110.5 72 72.2
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 6.9e-23 110.2 71 73.2
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.9e-23 110.2 72 73.6
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 6.9e-23 110.2 72 73.6
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 9.0e-23 109.8 72 72.2
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 9.0e-23 109.8 72 72.2
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.2e-22 109.4 72 72.2
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 1.2e-22 109.4 72 72.2
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.0e-22 108.6 72 73.6
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.0e-22 108.6 72 73.6
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 3.4e-22 107.8 72 68.1
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.4e-22 107.8 72 73.6
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 7.6e-22 106.7 72 66.7
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.0e-21 106.3 70 72.9
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.3e-21 105.9 72 68.1
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.3e-21 105.9 72 72.2
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.3e-21 105.9 72 72.2
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.7e-21 105.5 72 66.7
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.7e-21 105.5 72 69.4
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 2.9e-21 104.8 70 71.4
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 2.9e-21 104.8 72 70.8
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 2.9e-21 104.8 72 68.1
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 3.8e-21 104.4 72 66.7
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 5.0e-21 104.0 66 74.2
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 5.0e-21 104.0 66 74.2
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 5.0e-21 104.0 66 74.2
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 5.0e-21 104.0 66 74.2
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 8.4e-21 103.2 72 69.4
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 1.1e-20 102.8 72 66.7
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.1e-20 102.8 72 65.3
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.1e-20 102.8 72 68.1
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.4e-20 102.4 69 71.0
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.4e-20 102.4 72 66.7
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.9e-20 102.1 73 67.1
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.5e-20 101.7 72 68.1
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 3.2e-20 101.3 72 69.4
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 3.2e-20 101.3 72 66.7
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 5.5e-20 100.5 72 66.7
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 7.1e-20 100.1 71 66.2
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 7.1e-20 100.1 66 72.7
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 7.1e-20 100.1 72 66.7
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 9.3e-20 99.8 72 65.3
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.2e-19 99.4 72 65.3
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.2e-19 99.4 72 65.3
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.6e-19 99.0 72 62.5
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 2.1e-19 98.6 66 71.2
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 2.1e-19 98.6 66 69.7
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 3.5e-19 97.8 72 62.5
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 4.6e-19 97.4 72 62.5
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 6.1e-19 97.1 72 61.1
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.1e-19 97.1 72 61.1
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.1e-19 97.1 72 61.1
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 6.1e-19 97.1 72 61.1
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 6.1e-19 97.1 72 62.5
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 7.9e-19 96.7 71 67.6
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.3e-18 95.9 72 61.1
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 3.0e-18 94.7 72 61.1
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 3.9e-18 94.4 71 60.6
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 3.9e-18 94.4 72 58.3
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 3.9e-18 94.4 72 62.5
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 5.1e-18 94.0 72 65.3
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 8.7e-18 93.2 55 85.5
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.1e-17 92.8 73 61.6
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 4.3e-17 90.9 72 59.7
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 7.4e-17 90.1 74 58.1
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.8e-16 88.2 65 64.6
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 1.1e-15 86.3 86 51.2
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.8e-15 85.5 69 58.0
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.2e-14 82.8 49 73.5
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 2.0e-14 82.0 69 59.4
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 8.5e-13 76.6 75 45.3
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 2.7e-11 71.6 50 62.0
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 5.1e-10 67.4 44 70.5
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 5.7e-09 63.9 62 48.4
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.7e-08 62.4 47 59.6
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 3.7e-08 61.2 41 70.7
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.5e-06 55.8 69 42.0
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 7.7e-06 53.5 38 68.4


User provided reference genes

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