Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009380g0040 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.6e-73 279.3 134 100.0
Nitab4.5_0000246g0090 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.5e-34 149.1 134 63.4
Nitab4.5_0000831g0010 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.8e-32 142.9 134 61.9
Solyc10g007140.3 Solanum lycopersicum HOM05D000187 ORTHO05D000230 1.0e-27 127.1 134 52.2
Sopen10g003040 Solanum pennellii HOM05D000187 ORTHO05D000230 1.0e-27 127.1 134 52.2
PGSC0003DMG400021310 Solanum tuberosum HOM05D000187 ORTHO05D000230 1.9e-26 122.9 134 51.5
Peaxi162Scf00000g02711 Petunia axillaris HOM05D000187 ORTHO05D000230 1.2e-25 120.2 134 50.7
Nitab4.5_0005522g0030 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.1e-25 119.4 135 51.9
Solyc12g014070.2 Solanum lycopersicum HOM05D000187 ORTHO05D000230 4.0e-24 115.2 134 48.5
Sopen12g005840 Solanum pennellii HOM05D000187 ORTHO05D000230 2.0e-23 112.8 134 47.8
Nitab4.5_0000383g0400 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.6e-23 112.5 134 48.5
PGSC0003DMG401015329 Solanum tuberosum HOM05D000187 ORTHO05D000230 2.6e-23 112.5 134 47.8
Cc05_g11530 Coffea canephora HOM05D000187 ORTHO05D000230 2.3e-19 99.4 132 43.2
Rhsim04G0023500 Rhododendron simsii HOM05D000187 ORTHO05D000230 6.2e-17 91.3 134 43.3
Dinv14954 Davidia involucrata HOM05D000187 ORTHO05D000230 8.1e-17 90.9 134 40.3
Oeu060566.1 Olea europaea HOM05D000187 ORTHO05D000230 1.4e-16 90.1 135 40.7
Oeu025348.1 Olea europaea HOM05D000187 ORTHO05D000230 1.2e-15 87.0 134 38.8
Dinv20220 Davidia involucrata HOM05D000187 ORTHO05D000230 2.6e-15 85.9 134 38.8
SGA_v2.0_scaffold73G24216 Striga asiatica HOM05D000187 ORTHO05D000230 2.6e-15 85.9 135 40.7
Lj1C836T14 Lonicera japonica HOM05D000187 ORTHO05D000230 3.4e-15 85.5 115 43.5
CSS0038930 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 4.4e-15 85.1 134 38.8
HanXRQChr12g0372751 Helianthus annuus HOM05D000187 ORTHO05D000230 4.4e-15 85.1 133 37.6
Hma1.2p1_0416F.1_g148540 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 4.4e-15 85.1 134 39.6
CSS0029997 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 5.8e-15 84.7 132 38.6
MSTRG.14943 Avicennia marina HOM05D000187 ORTHO05D000230 9.9e-15 84.0 135 40.0
ECA234G2251 Erigeron canadensis HOM05D000187 ORTHO05D000230 9.9e-15 84.0 134 36.6
Migut.H01966 Erythranthe guttata HOM05D000187 ORTHO05D000230 3.7e-14 82.0 134 37.3
Hma1.2p1_0313F.1_g121590 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 6.4e-14 81.3 134 36.6
Gohir.A13G147800 Gossypium hirsutum HOM05D000187 ORTHO05D000230 8.4e-14 80.9 132 40.2
Gohir.D13G152400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.1e-13 80.5 132 39.4
Gorai.013G172300 Gossypium raimondii HOM05D000187 ORTHO05D000230 1.1e-13 80.5 132 39.4
Peaxi162Scf00069g01932 Petunia axillaris HOM05D000187 ORTHO05D000230 1.1e-13 80.5 134 38.1
Rhsim06G0203900 Rhododendron simsii HOM05D000187 ORTHO05D000230 1.4e-13 80.1 136 37.5
SGA_v2.0_scaffold130G34338 Striga asiatica HOM05D000187 ORTHO05D000230 2.4e-13 79.3 135 37.0
MSTRG.12886 Avicennia marina HOM05D000187 ORTHO05D000230 4.1e-13 78.6 132 40.9
Actinidia35231 Actinidia chinensis HOM05D000187 ORTHO05D000230 5.4e-13 78.2 134 38.8
HanXRQChr10g0302391 Helianthus annuus HOM05D000187 ORTHO05D000230 9.2e-13 77.4 134 35.8
Atru.chr2.2348 Acer truncatum HOM05D000187 ORTHO05D000230 1.6e-12 76.6 132 37.9
Manes.15G090400 Manihot esculenta HOM05D000187 ORTHO05D000230 2.7e-12 75.9 132 40.2
CiPaw.12G116200 Carya illinoinensis HOM05D000187 ORTHO05D000230 4.6e-12 75.1 132 34.8
Sabra11G0090200 Salix brachista HOM05D000187 ORTHO05D000230 6.0e-12 74.7 132 41.7
Sabra11G0091800 Salix brachista HOM05D000187 ORTHO05D000230 6.0e-12 74.7 132 41.7
Duzib268G0814 Durio zibethinus HOM05D000187 ORTHO05D000230 7.8e-12 74.3 133 39.1
TAR627G0605 Trochodendron aralioides HOM05D000187 ORTHO05D000230 7.8e-12 74.3 101 44.6
Potri.011G097100 Populus trichocarpa HOM05D000187 ORTHO05D000230 1.0e-11 73.9 134 39.6
DCAR_017116 Daucus carota HOM05D000187 ORTHO05D000230 1.3e-11 73.6 134 34.3
Migut.M00762 Erythranthe guttata HOM05D000187 ORTHO05D000230 1.7e-11 73.2 136 40.4
Manes.03G104000 Manihot esculenta HOM05D000187 ORTHO05D000230 1.7e-11 73.2 134 37.3
Gohir.D11G306400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 2.3e-11 72.8 133 39.1
Gorai.007G325600 Gossypium raimondii HOM05D000187 ORTHO05D000230 2.3e-11 72.8 133 39.1
Thecc.07G100600 Theobroma cacao HOM05D000187 ORTHO05D000230 3.0e-11 72.4 133 39.1
Cpa.g.sc841.2 Carica papaya HOM05D000187 ORTHO05D000230 3.9e-11 72.0 134 38.1
CiPaw.11G166100 Carya illinoinensis HOM05D000187 ORTHO05D000230 3.9e-11 72.0 132 33.3
Duzib213G0202 Durio zibethinus HOM05D000187 ORTHO05D000230 3.9e-11 72.0 131 38.2
Gohir.A01G059800 Gossypium hirsutum HOM05D000187 ORTHO05D000230 5.1e-11 71.6 133 39.1
TWI38G1205 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 5.1e-11 71.6 132 37.9
Duzib170G0195 Durio zibethinus HOM05D000187 ORTHO05D000230 1.1e-10 70.5 133 38.3
Aqoxy4G00555 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 1.9e-10 69.7 103 42.7
Gohir.D01G046200 Gossypium hirsutum HOM05D000187 ORTHO05D000230 2.5e-10 69.3 133 37.6
Gorai.002G065600 Gossypium raimondii HOM05D000187 ORTHO05D000230 2.5e-10 69.3 133 37.6
Potri.001G373700 Populus trichocarpa HOM05D000187 ORTHO05D000230 2.5e-10 69.3 132 38.6
Gohir.A11G286700 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.3e-10 68.9 133 37.6
Ciclev10007976m.g Citrus clementina HOM05D000187 ORTHO05D000230 4.3e-10 68.6 128 35.2
PSO210G6478 Papaver somniferum HOM05D000187 ORTHO05D000230 7.3e-10 67.8 101 42.6
VMungo1080G0860 Vigna mungo HOM05D000187 ORTHO05D000230 7.3e-10 67.8 101 44.6
PSO832G1249 Papaver somniferum HOM05D000187 ORTHO05D000230 2.1e-09 66.2 101 42.6
Solyc07g062720.3 Solanum lycopersicum HOM05D000187 ORTHO05D000230 3.6e-09 65.5 95 45.3
Sopen07g030950 Solanum pennellii HOM05D000187 ORTHO05D000230 3.6e-09 65.5 95 45.3
TAR626G0531 Trochodendron aralioides HOM05D000187 ORTHO05D000230 3.6e-09 65.5 102 47.1
PGSC0003DMG400012437 Solanum tuberosum HOM05D000187 ORTHO05D000230 4.7e-09 65.1 95 45.3
TAR374G1673 Trochodendron aralioides HOM05D000187 ORTHO05D000230 4.7e-09 65.1 92 41.3
GSVIVG01014254001 Vitis vinifera HOM05D000187 ORTHO05D000230 6.2e-09 64.7 132 36.4
ClCG07G009880 Citrullus lanatus HOM05D000187 ORTHO05D000230 1.8e-08 63.2 106 38.7
ECA236G3472 Erigeron canadensis HOM05D000187 ORTHO05D000230 2.4e-08 62.8 115 39.1
Psat5g241040 Pisum sativum HOM05D000187 ORTHO05D000230 2.4e-08 62.8 99 41.4
Sed0022745 Sechium edule HOM05D000187 ORTHO05D000230 2.4e-08 62.8 105 40.0
TPR.G29648 Trifolium pratense HOM05D000187 ORTHO05D000230 2.4e-08 62.8 99 41.4
Phvul.005G068800 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 3.1e-08 62.4 101 40.6
AUR62036129 Chenopodium quinoa HOM05D000187 ORTHO05D000230 4.0e-08 62.0 135 34.8
Ca_04027_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 5.2e-08 61.6 101 40.6
CsaV3_4G008450 Cucumis sativus L. HOM05D000187 ORTHO05D000230 6.8e-08 61.2 108 38.0
Sabra16G0246100 Salix brachista HOM05D000187 ORTHO05D000230 6.8e-08 61.2 133 37.6
FvH4_3g19090 Fragaria vesca HOM05D000187 ORTHO05D000230 8.9e-08 60.8 91 47.3
RcHm_v2.0_Chr5g0031881 Rosa chinensis HOM05D000187 ORTHO05D000230 8.9e-08 60.8 91 47.3
TAR374G0500 Trochodendron aralioides HOM05D000187 ORTHO05D000230 1.2e-07 60.5 93 39.8
TAR374G1745 Trochodendron aralioides HOM05D000187 ORTHO05D000230 1.2e-07 60.5 93 39.8
unitig_749.g13533 Utricularia gibba HOM05D000187 ORTHO05D000230 1.2e-07 60.5 92 40.2
FAN11G2980 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.5e-07 60.1 91 47.3
FAN16G0483 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.5e-07 60.1 91 47.3
FAN21G2982 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.5e-07 60.1 91 47.3
FAN25G2906 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.5e-07 60.1 91 47.3
Lsat_1_v5_gn_7_103700 Lactuca sativa HOM05D000187 ORTHO05D000230 1.5e-07 60.1 133 34.6
Medtr2g078450 Medicago truncatula HOM05D000187 ORTHO05D000230 1.5e-07 60.1 99 40.4
Sc16g0007360 Simmondsia chinensis HOM05D000187 ORTHO05D000230 1.5e-07 60.1 131 35.9
TWI39G1123 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 1.5e-07 60.1 113 36.3
CANSAT35G1306 Cannabis sativa HOM05D000187 ORTHO05D000230 2.0e-07 59.7 101 40.6
Prupe.4G172400 Prunus persica HOM05D000187 ORTHO05D000230 2.0e-07 59.7 132 36.4
Eucgr.F01182 Eucalyptus grandis HOM05D000187 ORTHO05D000230 3.4e-07 58.9 132 34.1
Lj3g0014756 Lotus japonicus HOM05D000187 ORTHO05D000230 3.4e-07 58.9 101 40.6
QL08p023141 Quercus lobata HOM05D000187 ORTHO05D000230 3.4e-07 58.9 133 32.3
Hund22763 Selenicereus undatus HOM05D000187 ORTHO05D000230 3.4e-07 58.9 138 32.6
AUR62019508 Chenopodium quinoa HOM05D000187 ORTHO05D000230 5.8e-07 58.2 135 33.3
Nitab4.5_0000332g0230 Nicotiana tabacum HOM05D000187 ORTHO05D000230 5.8e-07 58.2 134 32.8
Sed0003262 Sechium edule HOM05D000187 ORTHO05D000230 1.3e-06 57.0 107 36.4
Nn1g04281 Nelumbo nucifera HOM05D000187 ORTHO05D000230 2.2e-06 56.2 123 37.4
Glyma.13G272700 Glycine max HOM05D000187 ORTHO05D000230 2.9e-06 55.8 99 39.4
Nitab4.5_0001208g0110 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.9e-06 55.8 37 73.0
MBI07_g06443_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 3.8e-06 55.5 97 39.2
HPP92_023293 Vanilla planifolia HOM05D000187 ORTHO05D000230 3.8e-06 55.5 82 41.5
Lalb_Chr25g0286151 Lupinus albus HOM05D000187 ORTHO05D000230 6.4e-06 54.7 101 37.6
Nn1g06360 Nelumbo nucifera HOM05D000187 ORTHO05D000230 6.4e-06 54.7 93 41.9
Sopen12g030650 Solanum pennellii HOM05D000187 ORTHO05D000230 6.4e-06 54.7 91 41.8
THA.LOC104798754 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 6.4e-06 54.7 134 32.1
TAR629G2067 Trochodendron aralioides HOM05D000187 ORTHO05D000230 6.4e-06 54.7 85 38.8
THA.LOC104810450 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 8.4e-06 54.3 122 34.4


User provided reference genes

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