Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 1.8e-242 842.0 395 100.0
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.5e-215 751.9 395 90.1
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 1.0e-208 729.9 395 87.3
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 7.5e-204 713.8 395 85.6
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 2.8e-203 711.8 395 85.3
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 4.9e-203 711.1 395 85.3
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 1.6e-201 706.1 395 84.8
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 7.1e-154 547.7 403 63.3
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 1.9e-151 539.7 393 63.6
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 1.2e-148 530.4 386 64.0
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 9.3e-146 520.8 364 64.3
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 2.1e-145 519.6 358 65.4
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 2.1e-145 519.6 384 62.5
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 2.7e-145 519.2 363 65.6
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 1.0e-144 517.3 393 62.1
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 1.0e-144 517.3 392 62.5
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 6.7e-144 514.6 360 64.7
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 1.1e-143 513.8 338 69.2
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 1.9e-143 513.1 393 62.1
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 3.3e-143 512.3 353 66.3
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 4.3e-143 511.9 378 63.2
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 7.4e-143 511.1 396 61.4
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 6.2e-142 508.1 351 67.0
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 8.2e-142 507.7 357 64.1
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 2.4e-141 506.1 340 66.5
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 5.3e-141 505.0 373 62.5
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 1.5e-140 503.4 393 61.3
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 2.0e-140 503.1 393 60.3
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 4.5e-140 501.9 365 62.5
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 7.6e-140 501.1 353 65.2
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 4.9e-139 498.4 359 64.1
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 1.1e-138 497.3 344 65.1
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 3.2e-138 495.7 381 60.4
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 7.1e-138 494.6 344 66.6
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 9.3e-138 494.2 344 66.6
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 1.0e-136 490.7 389 60.2
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 1.3e-136 490.3 361 62.6
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 3.0e-136 489.2 365 61.6
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 3.9e-136 488.8 338 65.1
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 6.7e-136 488.0 378 60.1
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 5.7e-135 485.0 319 68.3
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 1.4e-133 480.3 384 59.6
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 2.4e-133 479.6 337 64.7
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 9.0e-133 477.6 365 61.4
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 2.2e-131 473.0 364 61.5
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 8.5e-131 471.1 319 68.0
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 1.6e-129 466.8 319 66.1
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 7.9e-129 464.5 381 59.6
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 1.0e-128 464.2 369 59.9
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 3.3e-127 459.1 293 70.0
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 1.3e-126 457.2 361 58.7
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 5.3e-125 451.8 309 67.6
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 2.9e-123 446.0 333 61.9
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 3.6e-121 439.1 312 65.1
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 1.0e-120 437.6 317 62.8
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 2.6e-119 433.0 389 53.7
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 1.4e-117 427.2 352 56.8
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 7.0e-117 424.9 342 57.3
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 2.0e-116 423.3 350 56.9
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 1.7e-115 420.2 372 55.9
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 5.0e-115 418.7 359 56.5
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 2.5e-114 416.4 326 61.7
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 7.2e-114 414.8 361 54.0
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.7e-113 412.9 303 64.0
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 5.9e-108 395.2 341 52.2
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.5e-106 389.8 338 56.8
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 3.0e-104 382.9 333 52.0
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 3.8e-99 365.9 339 51.6
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 5.7e-95 352.1 334 50.3
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 1.3e-94 350.9 257 62.3
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 1.0e-91 341.3 317 54.9
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 8.0e-73 278.5 361 43.5
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 2.0e-63 247.3 140 74.3
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 2.1e-60 237.3 160 68.1
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 4.7e-57 226.1 415 32.8
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 5.2e-56 222.6 182 59.9
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 5.1e-51 206.1 124 71.8
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 4.2e-45 186.4 139 59.0
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 8.1e-41 172.2 137 59.1
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 1.9e-37 161.0 159 54.1
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 1.1e-24 118.6 286 31.5
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 4.0e-24 116.7 303 28.7
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 5.8e-23 112.8 85 61.2
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 8.4e-22 109.0 58 75.9
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 2.0e-15 87.8 162 35.8
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 4.8e-09 66.6 42 69.0
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.1e-08 65.5 43 69.8
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 1.8e-08 64.7 41 68.3


User provided reference genes

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