Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 6.2e-183 644.0 337 100.0
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 4.4e-144 515.0 309 90.3
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.2e-141 506.9 306 87.3
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 2.2e-140 502.7 307 85.7
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 8.0e-138 494.2 299 86.0
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 1.0e-137 493.8 299 86.3
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 1.7e-135 486.5 306 82.4
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 2.0e-117 426.4 301 73.1
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.9e-117 424.9 306 71.2
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 1.5e-115 420.2 308 71.4
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 1.2e-114 417.2 308 70.1
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.8e-113 411.4 307 70.4
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 3.4e-112 409.1 301 68.4
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.3e-111 407.1 301 68.4
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 2.2e-111 406.4 295 68.8
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 6.4e-111 404.8 312 66.3
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 1.6e-109 400.2 300 67.7
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.0e-109 399.8 301 68.1
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 3.5e-109 399.1 256 76.6
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.6e-109 398.7 299 66.9
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 4.6e-109 398.7 306 69.0
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.0e-108 397.5 262 74.4
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 2.9e-108 396.0 300 67.3
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 6.6e-108 394.8 302 67.5
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 3.3e-107 392.5 320 65.0
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 7.3e-107 391.3 301 66.4
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 9.5e-107 391.0 306 67.0
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 2.1e-106 389.8 289 67.8
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 4.7e-106 388.7 300 66.0
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 6.2e-106 388.3 302 65.2
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 1.0e-105 387.5 258 74.4
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.0e-105 387.5 302 67.9
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.8e-105 386.7 262 73.3
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 2.3e-105 386.3 305 65.6
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 2.3e-105 386.3 302 65.6
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 8.9e-105 384.4 310 65.2
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.0e-104 383.3 300 66.0
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 3.4e-104 382.5 257 72.4
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 3.4e-104 382.5 306 65.4
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 5.8e-104 381.7 257 72.4
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 7.5e-104 381.3 257 72.0
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 7.5e-104 381.3 302 64.6
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.3e-103 380.6 299 64.9
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 2.9e-103 379.4 262 71.0
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 4.9e-103 378.6 268 68.7
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 4.9e-103 378.6 257 72.0
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.1e-102 377.5 300 63.7
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 5.4e-102 375.2 303 65.7
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 7.0e-102 374.8 302 62.3
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 1.2e-101 374.0 252 72.2
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.6e-101 373.6 297 63.6
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 2.0e-101 373.2 304 62.5
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 2.0e-101 373.2 254 69.3
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 6.0e-101 371.7 234 76.1
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 7.8e-101 371.3 304 65.8
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.7e-100 370.2 316 60.1
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 3.0e-100 369.4 234 75.6
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.9e-100 369.0 304 62.2
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 3.9e-100 369.0 254 69.3
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 5.0e-100 368.6 254 68.9
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 5.0e-100 368.6 254 69.3
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 1.5e-99 367.1 258 69.0
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.9e-99 366.7 300 61.7
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 3.3e-99 365.9 266 66.9
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 3.3e-99 365.9 254 69.7
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 5.6e-99 365.2 266 66.9
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.6e-98 363.6 303 60.7
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 2.1e-98 363.2 314 60.5
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 8.1e-98 361.3 244 69.7
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 8.1e-98 361.3 268 69.4
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.1e-97 360.9 244 69.3
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 1.1e-97 360.9 309 60.5
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 1.4e-97 360.5 284 64.1
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.4e-97 360.5 293 61.8
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.8e-97 360.1 252 71.0
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 3.1e-97 359.4 297 61.6
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 6.8e-97 358.2 380 54.2
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.5e-96 357.1 260 67.7
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 5.4e-94 348.6 248 66.9
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 7.8e-93 344.7 264 65.2
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 3.0e-92 342.8 271 62.7
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.9e-91 340.1 277 63.9
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.9e-91 340.1 216 76.4
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 2.5e-91 339.7 277 63.5
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 9.5e-91 337.8 243 67.1
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 3.6e-90 335.9 249 64.7
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.8e-89 333.6 237 67.9
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 6.8e-89 331.6 302 58.3
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 3.7e-87 325.9 217 72.4
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 1.9e-86 323.6 239 64.9
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 9.2e-86 321.2 216 72.2
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.6e-85 320.5 215 69.3
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 2.1e-85 320.1 220 70.5
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 3.5e-85 319.3 276 58.0
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 7.3e-83 311.6 262 65.3
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.4e-81 307.4 297 54.5
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 5.2e-81 305.4 191 76.4
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.4e-73 280.8 191 68.1
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.1e-73 279.6 219 64.4
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 1.3e-68 264.2 200 63.0
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 3.3e-67 259.6 322 45.3
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 5.3e-65 252.3 271 48.3
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 2.7e-61 240.0 224 55.8
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 9.6e-59 231.5 263 47.9
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 6.2e-58 228.8 147 74.8
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 5.8e-56 222.2 229 51.1
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.6e-48 195.3 129 72.9
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 5.7e-43 179.1 247 42.9
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 7.2e-38 162.2 105 73.3
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.0e-19 100.9 67 73.1
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 5.7e-19 99.4 67 73.1
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 5.7e-19 99.4 67 73.1
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.7e-19 98.6 75 64.0
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.2e-18 97.4 65 69.2
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 8.2e-18 95.5 75 61.3
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 3.8e-15 86.7 251 31.1
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 8.5e-07 58.9 35 74.3


User provided reference genes

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