Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009272g0060 Nicotiana tabacum HOM05D004071 ORTHO05D004501 7.6e-160 567.4 344 100.0
Nitab4.5_0004420g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 3.9e-132 475.3 359 86.6
PGSC0003DMG400010091 Solanum tuberosum HOM05D004071 ORTHO05D004501 1.3e-119 433.7 361 80.1
PGSC0003DMG400018768 Solanum tuberosum HOM05D004071 ORTHO05D004501 4.2e-118 428.7 349 71.3
CAN.G153.14 Capsicum annuum HOM05D004071 ORTHO05D004501 1.3e-116 423.7 355 69.0
Peaxi162Scf01056g00238 Petunia axillaris HOM05D004071 ORTHO05D004501 1.4e-113 413.7 359 64.9
Cc07_g04980 Coffea canephora HOM05D004071 ORTHO05D004501 1.3e-111 407.1 353 66.6
Thecc.04G143800 Theobroma cacao HOM05D004071 ORTHO05D004501 3.3e-107 392.5 359 62.7
Carub.0003s0151 Capsella rubella HOM05D004071 ORTHO05D004501 7.4e-107 391.3 356 71.6
CiPaw.04G003700 Carya illinoinensis HOM05D004071 ORTHO05D004501 1.7e-106 390.2 359 59.9
Actinidia36304 Actinidia chinensis HOM05D004071 ORTHO05D004501 3.7e-106 389.0 359 67.7
Manes.02G065500 Manihot esculenta HOM05D004071 ORTHO05D004501 3.7e-106 389.0 361 65.1
Solyc03g045090.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 4.8e-106 388.7 349 64.2
Gorai.001G203600 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.1e-105 387.5 359 62.4
Oeu049330.1 Olea europaea HOM05D004071 ORTHO05D004501 1.8e-105 386.7 361 57.3
Atru.chr10.1868 Acer truncatum HOM05D004071 ORTHO05D004501 2.4e-105 386.3 359 57.4
Gohir.D07G183200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.1e-105 386.0 359 61.0
COL.COLO4_04619 Corchorus olitorius HOM05D004071 ORTHO05D004501 4.1e-105 385.6 359 61.0
Rhsim10G0064500 Rhododendron simsii HOM05D004071 ORTHO05D004501 9.1e-105 384.4 358 67.3
Ciclev10012116m.g Citrus clementina HOM05D004071 ORTHO05D004501 1.2e-104 384.0 363 56.7
AT3G02420 Arabidopsis thaliana HOM05D004071 ORTHO05D004501 1.5e-104 383.6 356 70.8
Hma1.2p1_0550F.1_g177140 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 2.0e-104 383.3 359 57.9
Lsat_1_v5_gn_2_86560 Lactuca sativa HOM05D004071 ORTHO05D004501 2.6e-104 382.9 358 59.8
Oeu025120.1 Olea europaea HOM05D004071 ORTHO05D004501 2.6e-104 382.9 358 59.2
CSS0015718 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 3.4e-104 382.5 359 58.5
Potri.017G110600 Populus trichocarpa HOM05D004071 ORTHO05D004501 3.4e-104 382.5 359 69.1
CARHR076390 Cardamine hirsuta HOM05D004071 ORTHO05D004501 7.7e-104 381.3 356 63.5
Sopen03g009550 Solanum pennellii HOM05D004071 ORTHO05D004501 1.0e-103 380.9 349 64.2
Cfa007968 Carpinus fangiana HOM05D004071 ORTHO05D004501 1.3e-103 380.6 359 58.5
THA.LOC104827150 Tarenaya hassleriana HOM05D004071 ORTHO05D004501 2.2e-103 379.8 356 63.2
BcaB04g21412 Brassica carinata HOM05D004071 ORTHO05D004501 5.0e-103 378.6 356 66.9
BcaC05g30354 Brassica carinata HOM05D004071 ORTHO05D004501 5.0e-103 378.6 356 64.6
Gohir.A07G176100 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.1e-102 377.5 353 61.5
Gorai.001G082400 Gossypium raimondii HOM05D004071 ORTHO05D004501 1.1e-102 377.5 353 56.9
TAR622G0876 Trochodendron aralioides HOM05D004071 ORTHO05D004501 2.5e-102 376.3 350 58.3
Prupe.3G241500 Prunus persica HOM05D004071 ORTHO05D004501 3.2e-102 375.9 359 57.4
Duzib133G0960 Durio zibethinus HOM05D004071 ORTHO05D004501 4.2e-102 375.6 359 68.5
TWI77G0983 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 5.5e-102 375.2 358 66.5
Glyma.13G047900 Glycine max HOM05D004071 ORTHO05D004501 7.2e-102 374.8 359 55.4
Hund16109 Selenicereus undatus HOM05D004071 ORTHO05D004501 9.4e-102 374.4 349 60.5
BraA05t23141Z Brassica rapa HOM05D004071 ORTHO05D004501 2.1e-101 373.2 356 65.2
Thhalv10021061m.g Eutrema salsugineum HOM05D004071 ORTHO05D004501 2.1e-101 373.2 357 69.5
CiPaw.03G006000 Carya illinoinensis HOM05D004071 ORTHO05D004501 3.6e-101 372.5 359 59.1
Psat1g062200 Pisum sativum HOM05D004071 ORTHO05D004501 3.6e-101 372.5 358 56.4
Potri.004G104900 Populus trichocarpa HOM05D004071 ORTHO05D004501 3.6e-101 372.5 359 55.7
Gohir.A07G073300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 4.7e-101 372.1 353 55.8
Oeu032872.2 Olea europaea HOM05D004071 ORTHO05D004501 4.7e-101 372.1 357 56.0
TPR.G9685 Trifolium pratense HOM05D004071 ORTHO05D004501 1.0e-100 370.9 358 55.3
Cpa.g.sc179.42 Carica papaya HOM05D004071 ORTHO05D004501 1.4e-100 370.5 359 60.4
Dinv34868 Davidia involucrata HOM05D004071 ORTHO05D004501 1.8e-100 370.2 355 62.3
Migut.K00863 Erythranthe guttata HOM05D004071 ORTHO05D004501 1.8e-100 370.2 355 56.6
MSTRG.23829 Avicennia marina HOM05D004071 ORTHO05D004501 3.9e-100 369.0 358 60.6
Lj4A130T17 Lonicera japonica HOM05D004071 ORTHO05D004501 3.9e-100 369.0 359 63.2
Duzib268G0320 Durio zibethinus HOM05D004071 ORTHO05D004501 5.1e-100 368.6 359 58.8
Sp3g01460 Schrenkiella parvula HOM05D004071 ORTHO05D004501 5.1e-100 368.6 359 65.2
Aa31LG5G12930 Aethionema arabicum HOM05D004071 ORTHO05D004501 8.8e-100 367.9 356 68.0
GSVIVG01036463001 Vitis vinifera HOM05D004071 ORTHO05D004501 8.8e-100 367.9 353 64.0
MD17G1072900 Malus domestica HOM05D004071 ORTHO05D004501 1.5e-99 367.1 359 55.4
Lsat_1_v5_gn_4_175840 Lactuca sativa HOM05D004071 ORTHO05D004501 2.0e-99 366.7 354 61.9
Gohir.D07G078000 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.3e-99 365.9 369 54.2
MELO3C022067.2 Cucumis melo HOM05D004071 ORTHO05D004501 9.7e-99 364.4 359 59.6
Lj2g0019369 Lotus japonicus HOM05D004071 ORTHO05D004501 9.7e-99 364.4 358 55.6
BcaC09g47699 Brassica carinata HOM05D004071 ORTHO05D004501 1.7e-98 363.6 356 63.2
MD09G1082200 Malus domestica HOM05D004071 ORTHO05D004501 6.3e-98 361.7 353 56.7
Phvul.004G073300 Phaseolus vulgaris HOM05D004071 ORTHO05D004501 6.3e-98 361.7 359 54.0
Medtr6g016780 Medicago truncatula HOM05D004071 ORTHO05D004501 1.1e-97 360.9 359 58.8
ECA232G0981 Erigeron canadensis HOM05D004071 ORTHO05D004501 1.8e-97 360.1 359 62.1
Hund13742 Selenicereus undatus HOM05D004071 ORTHO05D004501 1.8e-97 360.1 354 57.9
CANSAT64G0921 Cannabis sativa HOM05D004071 ORTHO05D004501 2.4e-97 359.8 360 55.3
unitig_62.g23397 Utricularia gibba HOM05D004071 ORTHO05D004501 2.4e-97 359.8 359 65.7
TAR629G1013 Trochodendron aralioides HOM05D004071 ORTHO05D004501 3.1e-97 359.4 353 60.1
vmacro18101 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 3.1e-97 359.4 358 64.5
Actinidia26308 Actinidia chinensis HOM05D004071 ORTHO05D004501 4.1e-97 359.0 351 61.8
DCAR_007521 Daucus carota HOM05D000912 ORTHO05D004501 4.1e-97 359.0 356 54.5
SalBow1G4702 Salvia bowleyana HOM05D004071 ORTHO05D004501 9.1e-97 357.8 357 57.4
SalBow1G4945 Salvia bowleyana HOM05D004071 ORTHO05D004501 9.1e-97 357.8 357 57.4
TWI74G0934 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 1.2e-96 357.5 359 64.1
HanXRQChr09g0263441 Helianthus annuus HOM05D004071 ORTHO05D004501 1.6e-96 357.1 353 59.5
SGA_v2.0_scaffold204G41658 Striga asiatica HOM05D004071 ORTHO05D004501 2.0e-96 356.7 359 56.0
CsaV3_5G039030 Cucumis sativus L. HOM05D004071 ORTHO05D004501 1.0e-95 354.4 359 56.8
Gorai.004G047400 Gossypium raimondii HOM05D004071 ORTHO05D004501 2.2e-95 353.2 359 59.1
arahy.Tifrunner.gnm1.ann1.85GVTZ Arachis hypogaea HOM05D004071 ORTHO05D004501 2.9e-95 352.8 358 52.8
Ca_14084_v3 Cicer arietinum L. HOM05D004071 ORTHO05D004501 2.9e-95 352.8 358 53.6
Gohir.A08G037600 Gossypium hirsutum HOM05D004071 ORTHO05D004501 3.8e-95 352.4 359 58.2
Nn3g17651 Nelumbo nucifera HOM05D004071 ORTHO05D004501 3.8e-95 352.4 353 57.2
Ah.16g102220 Amaranthus hybridus HOM05D004071 ORTHO05D004501 5.0e-95 352.1 360 60.8
Sed0017773 Sechium edule HOM05D004071 ORTHO05D004501 5.0e-95 352.1 352 58.2
EL10Ac2g04623 Beta vulgaris HOM05D004071 ORTHO05D004501 1.1e-94 350.9 375 52.3
Rhsim08G0080100 Rhododendron simsii HOM05D004071 ORTHO05D004501 1.5e-94 350.5 358 55.9
Gohir.D08G047900 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.9e-94 350.1 359 58.2
Migut.H00537 Erythranthe guttata HOM05D004071 ORTHO05D004501 7.2e-94 348.2 359 56.0
Lalb_Chr17g0336551 Lupinus albus HOM05D004071 ORTHO05D004501 1.6e-93 347.1 354 63.8
arahy.Tifrunner.gnm1.ann1.SG5ZZ4 Arachis hypogaea HOM05D004071 ORTHO05D004501 4.7e-93 345.5 359 55.4
MBI16_g36053_MAGBIO Magnolia biondii HOM05D004071 ORTHO05D004501 4.7e-93 345.5 379 51.2
arahy.Tifrunner.gnm1.ann1.UUQR92 Arachis hypogaea HOM05D004071 ORTHO05D004501 6.1e-93 345.1 353 55.8
HanXRQChr07g0200191 Helianthus annuus HOM05D004071 ORTHO05D004501 8.0e-93 344.7 357 59.1
FAN09G0395 Fragaria x ananassa HOM05D000085 ORTHO05D004501 1.4e-92 344.0 358 53.4
PSO063G1546 Papaver somniferum HOM05D004071 ORTHO05D004501 1.1e-91 340.9 353 55.2
ClCG11G005270 Citrullus lanatus HOM05D004071 ORTHO05D004501 2.0e-91 340.1 359 54.9
PSO782G5396 Papaver somniferum HOM05D004071 ORTHO05D004501 9.7e-91 337.8 353 54.4
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 9.7e-91 337.8 359 55.7
PGR042G1023 Punica granatum HOM05D004071 ORTHO05D004501 1.7e-90 337.0 359 55.2
AUR62008952 Chenopodium quinoa HOM05D004071 ORTHO05D004501 4.8e-90 335.5 361 54.3
FvH4_6g45520 Fragaria vesca HOM05D004071 ORTHO05D004501 4.8e-90 335.5 358 54.5
AUR62014550 Chenopodium quinoa HOM05D004071 ORTHO05D004501 6.3e-90 335.1 374 52.1
Aqoxy3G00414 Aquilegia oxysepala HOM05D004071 ORTHO05D004501 4.1e-89 332.4 359 51.3
FAN14G5468 Fragaria x ananassa HOM05D000085 ORTHO05D004501 7.0e-89 331.6 357 54.3
VMungo0464G1781 Vigna mungo HOM05D004071 ORTHO05D004501 7.0e-89 331.6 359 54.6
RcHm_v2.0_Chr2g0163461 Rosa chinensis HOM05D004071 ORTHO05D004501 1.2e-88 330.9 358 55.9
FAN02G1076 Fragaria x ananassa HOM05D000085 ORTHO05D004501 2.0e-88 330.1 357 54.3
vmacro05581 Vaccinium macrocarpon HOM05D004071 ORTHO05D004501 2.0e-88 330.1 443 58.2
FAN05G3345 Fragaria x ananassa HOM05D004071 ORTHO05D004501 1.3e-87 327.4 358 53.6
PSO017G6828 Papaver somniferum HOM05D004071 ORTHO05D004501 1.1e-86 324.3 358 49.2
CDE08G1388 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 9.4e-86 321.2 345 51.9
PSO478G0222 Papaver somniferum HOM05D004071 ORTHO05D004501 1.0e-84 317.8 359 47.9
HPP92_011599 Vanilla planifolia HOM05D004071 ORTHO05D004501 4.0e-84 315.8 360 48.6
Zm00001eb161490 Zea mays HOM05D004071 ORTHO05D004501 8.8e-84 314.7 358 47.8
Sabra04G0076900 Salix brachista HOM05D004071 ORTHO05D004501 2.0e-83 313.5 453 43.0
Sed0022702 Sechium edule HOM05D004071 ORTHO05D004501 2.0e-83 313.5 340 51.2
Hma1.2p1_0136F.1_g061955 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 2.8e-82 309.7 319 53.9
Os01g0604700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 2.8e-82 309.7 348 48.3
unitig_32.g10761 Utricularia gibba HOM05D004071 ORTHO05D004501 1.2e-80 304.3 353 52.4
AL3G11710 Arabidopsis lyrata HOM05D004071 ORTHO05D004501 1.0e-79 301.2 310 63.9
HPP92_003788 Vanilla planifolia HOM05D004071 ORTHO05D004501 3.2e-78 296.2 362 45.3
CDE06G1497 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 2.1e-77 293.5 353 50.7
ClCG05G012000 Citrullus lanatus HOM05D004071 ORTHO05D004501 2.1e-77 293.5 359 44.6
Os05g0589000 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 2.1e-77 293.5 351 47.6
CSS0021599 Camellia sinensis var. sinensis HOM05D004071 ORTHO05D004501 6.1e-77 292.0 262 60.3
Zm00001eb297500 Zea mays HOM05D004071 ORTHO05D004501 1.8e-76 290.4 353 47.0
BolC5t35082H Brassica oleracea HOM05D004071 ORTHO05D007018 4.0e-76 289.3 308 62.7
Sed0014814 Sechium edule HOM05D004071 ORTHO05D004501 4.4e-75 285.8 359 44.0
SEGI_38032 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 5.7e-75 285.4 349 49.6
Nitab4.5_0000612g0160 Nicotiana tabacum HOM05D004071 ORTHO05D004501 7.5e-75 285.0 341 52.2
Nn4g23653 Nelumbo nucifera HOM05D004071 ORTHO05D004501 1.3e-74 284.3 317 54.3
PGR004G2426 Punica granatum HOM05D004071 ORTHO05D004501 3.1e-73 279.6 305 56.7
Glyma.19G043700 Glycine max HOM05D004071 ORTHO05D004501 1.6e-72 277.3 301 57.1
TAR371G1199 Trochodendron aralioides HOM05D004071 ORTHO05D004501 7.7e-72 275.0 303 51.5
C09p75710 Brassica napus HOM05D002308 ORTHO05D002535 4.7e-69 265.8 299 61.2
A05p45210 Brassica napus HOM05D002308 ORTHO05D007018 8.9e-68 261.5 301 61.1
Peaxi162Scf00479g00310 Petunia axillaris HOM05D004071 ORTHO05D004501 8.3e-66 255.0 309 59.9
DCAR_010977 Daucus carota HOM05D004071 ORTHO05D004501 3.0e-63 246.5 335 45.4
Dinv33918 Davidia involucrata HOM05D004071 ORTHO05D004501 5.0e-63 245.7 177 70.6
SMO164G0101 Selaginella moellendorffii HOM05D004071 ORTHO05D004501 2.9e-58 229.9 346 38.4
AagrBONN_evm.TU.Sc2ySwM_117.1813 Anthoceros agrestis HOM05D004071 ORTHO05D004501 4.3e-54 216.1 355 36.3
Eucgr.I02122 Eucalyptus grandis HOM05D004071 ORTHO05D004501 9.5e-54 214.9 247 50.2
arahy.Tifrunner.gnm1.ann1.2VHL38 Arachis hypogaea HOM05D004071 ORTHO05D004501 1.2e-53 214.5 245 48.6
Sc10g0001400 Simmondsia chinensis HOM05D004071 ORTHO05D004501 3.6e-53 213.0 240 52.1
BolC1t05906H Brassica oleracea HOM05D004071 ORTHO05D004501 1.4e-52 211.1 259 59.8
Mapoly0013s0171 Marchantia polymorpha HOM05D004071 ORTHO05D004501 6.8e-52 208.8 351 33.3
ATR0730G004 Amborella trichopoda HOM05D004071 ORTHO05D004501 3.4e-51 206.5 289 47.8
BraSC141t45626Z Brassica rapa HOM05D004071 ORTHO05D004501 5.8e-51 205.7 258 56.2
BNapus_Darmor_BZH_scaffold_208p00070 Brassica napus HOM05D004071 ORTHO05D004501 2.9e-50 203.4 258 62.4
QL02p053393 Quercus lobata HOM05D004071 ORTHO05D004501 7.1e-49 198.7 243 51.0
Nitab4.5_0003161g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 6.0e-48 195.7 102 91.2
Pp3c7_9290 Physcomitrium patens HOM05D004071 ORTHO05D004501 3.9e-47 193.0 352 32.7
SHI25579 Sapria himalayana HOM05D004071 ORTHO05D004501 1.5e-46 191.0 230 43.9
Gohir.A13G091200 Gossypium hirsutum HOM05D004071 ORTHO05D004501 9.5e-46 188.3 248 48.8
Lj7A9T84 Lonicera japonica HOM05D004071 ORTHO05D004501 4.0e-44 183.0 236 49.2
TPR.G28780 Trifolium pratense HOM05D004071 ORTHO05D004501 8.9e-44 181.8 152 59.9
Zm00001eb158750 Zea mays HOM05D004071 ORTHO05D004501 3.4e-43 179.9 244 43.9
Os01g0641700 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 3.2e-41 173.3 255 42.4
QL02p053385 Quercus lobata HOM05D004071 ORTHO05D004501 7.8e-40 168.7 101 75.2
CDE05G2628 Ceratophyllum demersum HOM05D004071 ORTHO05D004501 2.1e-37 160.6 258 36.8
Dinv33917 Davidia involucrata HOM05D004071 ORTHO05D004501 2.9e-34 150.2 124 65.3
Gohir.A03G111050 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.9e-30 137.5 128 60.2
Solyc02g089780.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 7.3e-30 135.6 344 29.7
Actinidia17620 Actinidia chinensis HOM05D004071 ORTHO05D004501 1.5e-27 127.9 75 78.7
SEGI_19153 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 1.2e-19 101.7 54 74.1
Gohir.A10G225466 Gossypium hirsutum HOM05D004071 ORTHO05D004501 1.6e-16 91.3 51 82.4
unitig_52.g17623 Utricularia gibba HOM05D004071 ORTHO05D004501 2.8e-13 80.5 104 48.1
Gohir.A04G081800 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.2e-10 70.9 61 63.9
Gohir.A13G168300 Gossypium hirsutum HOM05D004071 ORTHO05D004501 2.2e-10 70.9 61 63.9
arahy.Tifrunner.gnm1.ann1.FI956K Arachis hypogaea HOM05D004071 ORTHO05D004501 2.9e-10 70.5 126 34.1
BcaC02g08620 Brassica carinata HOM05D004071 ORTHO05D004501 4.2e-09 66.6 46 65.2
CBR_g42155 Chara braunii HOM05D004071 ORTHO05D004501 7.4e-06 55.8 113 30.1


User provided reference genes

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