Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009244g0040 Nicotiana tabacum HOM05D002365 ORTHO05D002574 1.8e-60 235.7 116 100.0
Nitab4.5_0001220g0070 Nicotiana tabacum HOM05D002365 ORTHO05D002574 1.9e-30 136.0 70 94.3
Solyc01g112310.4 Solanum lycopersicum HOM05D002365 ORTHO05D002574 2.3e-28 129.0 76 82.9
Sopen01g054410 Solanum pennellii HOM05D002365 ORTHO05D002574 2.3e-28 129.0 76 82.9
CAN.G1645.9 Capsicum annuum HOM05D002365 ORTHO05D002574 2.6e-27 125.6 76 80.3
Peaxi162Scf00362g00151 Petunia axillaris HOM05D002365 ORTHO05D002574 1.0e-23 113.6 68 85.3
Aa31LG6G12420 Aethionema arabicum HOM05D002365 ORTHO05D002574 5.0e-15 84.7 72 52.8
A01p03140 Brassica napus HOM05D002365 ORTHO05D002574 9.4e-14 80.5 67 52.2
Oeu061894.1 Olea europaea HOM05D002365 ORTHO05D002574 2.1e-13 79.3 69 58.0
Actinidia26116 Actinidia chinensis HOM05D002365 ORTHO05D002574 2.7e-13 79.0 76 48.7
AT4G35440 Arabidopsis thaliana HOM05D002365 ORTHO05D002574 3.6e-13 78.6 67 50.7
AL7G15730 Arabidopsis lyrata HOM05D002365 ORTHO05D002574 4.7e-13 78.2 67 49.3
BcaNung03628 Brassica carinata HOM05D002365 ORTHO05D002574 4.7e-13 78.2 67 52.2
Thhalv10024547m.g Eutrema salsugineum HOM05D002365 ORTHO05D002574 4.7e-13 78.2 67 50.7
Manes.15G112600 Manihot esculenta HOM05D002365 ORTHO05D002574 4.7e-13 78.2 77 46.8
Nn6g31530 Nelumbo nucifera HOM05D002365 ORTHO05D002574 6.1e-13 77.8 77 46.8
Carub.0007s0489 Capsella rubella HOM05D002365 ORTHO05D002574 1.0e-12 77.0 64 51.6
Sp7g33210 Schrenkiella parvula HOM05D002365 ORTHO05D002574 1.0e-12 77.0 67 49.3
Lj5A169T95 Lonicera japonica HOM05D002365 ORTHO05D002574 1.4e-12 76.6 66 56.1
BolC1t00336H Brassica oleracea HOM05D002365 ORTHO05D002574 1.8e-12 76.3 67 52.2
BraA01t00298Z Brassica rapa HOM05D002365 ORTHO05D002574 1.8e-12 76.3 67 52.2
Gohir.A12G011800 Gossypium hirsutum HOM05D002365 ORTHO05D002574 1.8e-12 76.3 76 47.4
Gorai.008G012300 Gossypium raimondii HOM05D002365 ORTHO05D002574 1.8e-12 76.3 76 47.4
Thecc.02G150000 Theobroma cacao HOM05D002365 ORTHO05D002574 1.8e-12 76.3 77 49.4
COL.COLO4_10144 Corchorus olitorius HOM05D002365 ORTHO05D002574 2.3e-12 75.9 77 50.6
Hma1.2p1_0032F.1_g018640 Hydrangea macrophylla HOM05D002365 ORTHO05D002574 3.0e-12 75.5 70 52.9
C01p03490 Brassica napus HOM05D002365 ORTHO05D002574 4.0e-12 75.1 67 50.7
Cc03_g15900 Coffea canephora HOM05D002365 ORTHO05D002574 4.0e-12 75.1 72 50.0
SGA_v2.0_scaffold12G06249 Striga asiatica HOM05D002365 ORTHO05D002574 4.0e-12 75.1 68 55.9
Atru.chr5.3597 Acer truncatum HOM05D002365 ORTHO05D002574 5.2e-12 74.7 69 50.7
Gohir.D12G012200 Gossypium hirsutum HOM05D002365 ORTHO05D002574 5.2e-12 74.7 76 46.1
THA.LOC104807414 Tarenaya hassleriana HOM05D002365 ORTHO05D002574 5.2e-12 74.7 67 50.7
Haze_02478 Corylus avellana HOM05D002365 ORTHO05D002574 6.8e-12 74.3 77 45.5
MD10G1145500 Malus domestica HOM05D002365 ORTHO05D002574 6.8e-12 74.3 70 50.0
BcaNung00594 Brassica carinata HOM05D002365 ORTHO05D002574 8.8e-12 73.9 67 52.2
RcHm_v2.0_Chr6g0281741 Rosa chinensis HOM05D002365 ORTHO05D002574 8.8e-12 73.9 77 41.6
CARHR243750 Cardamine hirsuta HOM05D002365 ORTHO05D002574 2.0e-11 72.8 67 47.8
CiPaw.06G112700 Carya illinoinensis HOM05D002365 ORTHO05D002574 2.0e-11 72.8 77 48.1
GSVIVG01023836001 Vitis vinifera HOM05D002365 ORTHO05D002574 2.0e-11 72.8 72 50.0
Migut.G00790 Erythranthe guttata HOM05D002365 ORTHO05D002574 2.6e-11 72.4 75 50.7
QL11p057134 Quercus lobata HOM05D002365 ORTHO05D002574 3.4e-11 72.0 68 52.9
FAN27G2479 Fragaria x ananassa HOM05D002365 ORTHO05D002574 5.7e-11 71.2 77 39.0
FAN27G3495 Fragaria x ananassa HOM05D002365 ORTHO05D002574 5.7e-11 71.2 77 39.0
MBI16_g30317_MAGBIO Magnolia biondii HOM05D002365 ORTHO05D002574 5.7e-11 71.2 77 45.5
TWI79G0131 Tripterygium wilfordii HOM05D002365 ORTHO05D002574 7.5e-11 70.9 77 44.2
Duzib132G0706 Durio zibethinus HOM05D002365 ORTHO05D002574 1.3e-10 70.1 69 47.8
FvH4_2g17250 Fragaria vesca HOM05D002365 ORTHO05D002574 1.3e-10 70.1 77 39.0
FAN24G0967 Fragaria x ananassa HOM05D002365 ORTHO05D002574 1.3e-10 70.1 77 39.0
Rhsim02G0256400 Rhododendron simsii HOM05D002365 ORTHO05D002574 2.8e-10 68.9 69 46.4
Migut.L00002 Erythranthe guttata HOM05D002365 ORTHO05D002574 3.7e-10 68.6 75 49.3
Potri.004G209900 Populus trichocarpa HOM05D002365 ORTHO05D002574 3.7e-10 68.6 77 40.3
Hund00324 Selenicereus undatus HOM05D002365 ORTHO05D002574 3.7e-10 68.6 72 45.8
PSO170G4915 Papaver somniferum HOM05D002365 ORTHO05D002574 4.8e-10 68.2 68 45.6
Eucgr.I01555 Eucalyptus grandis HOM05D002365 ORTHO05D002574 6.3e-10 67.8 69 44.9
TAR628G0799 Trochodendron aralioides HOM05D002365 ORTHO05D002574 6.3e-10 67.8 75 41.3
Dinv14192 Davidia involucrata HOM05D002365 ORTHO05D002574 1.4e-09 66.6 69 50.7
FAN15G1781 Fragaria x ananassa HOM05D002365 ORTHO05D002574 1.4e-09 66.6 72 40.3
AUR62016629 Chenopodium quinoa HOM05D002365 ORTHO05D002574 1.8e-09 66.2 72 50.0
SalBow3G0950 Salvia bowleyana HOM05D002365 ORTHO05D002574 1.8e-09 66.2 60 58.3
Ciclev10030354m.g Citrus clementina HOM05D002365 ORTHO05D002574 2.4e-09 65.9 69 43.5
Ah.01g020120 Amaranthus hybridus HOM05D002365 ORTHO05D002574 4.1e-09 65.1 72 47.2
PSO017G2081 Papaver somniferum HOM05D002365 ORTHO05D002574 5.4e-09 64.7 68 44.1
AUR62011432 Chenopodium quinoa HOM05D002365 ORTHO05D002574 9.1e-09 63.9 69 50.7
Sc14g0001620 Simmondsia chinensis HOM05D002365 ORTHO05D002574 1.2e-08 63.5 76 40.8
Aqoxy6G02685 Aquilegia oxysepala HOM05D002365 ORTHO05D002574 2.0e-08 62.8 57 49.1
CANSAT25G3677 Cannabis sativa HOM05D002365 ORTHO05D002574 1.0e-07 60.5 76 38.2
DCAR_028396 Daucus carota HOM05D002365 ORTHO05D002574 1.0e-07 60.5 69 44.9
PGR142G3830 Punica granatum HOM05D002365 ORTHO05D002574 1.0e-07 60.5 69 43.5
MELO3C013474.2 Cucumis melo HOM05D002365 ORTHO05D002574 3.8e-07 58.5 78 39.7
EL10Ac9g21826 Beta vulgaris HOM05D002365 ORTHO05D002574 5.0e-07 58.2 72 41.7
ClCG02G010710 Citrullus lanatus HOM05D002365 ORTHO05D002574 6.6e-07 57.8 77 39.0
HanXRQChr17g0558391 Helianthus annuus HOM05D002365 ORTHO05D002574 1.1e-06 57.0 76 46.1
LjContig00081g0016042 Lotus japonicus HOM05D002365 ORTHO05D002574 2.5e-06 55.8 77 37.7
ECA233G2860 Erigeron canadensis HOM05D002365 ORTHO05D002574 5.5e-06 54.7 76 44.7
CsaV3_6G009920 Cucumis sativus L. HOM05D002365 ORTHO05D002574 7.2e-06 54.3 77 36.4
Lalb_Chr10g0107711 Lupinus albus HOM05D002365 ORTHO05D002574 9.5e-06 53.9 72 37.5


User provided reference genes

Program Settings