Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009213g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.2e-62 243.0 127 100.0
Nitab4.5_0000943g0070 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.1e-39 166.8 131 73.3
Peaxi162Scf00876g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 6.9e-34 147.5 177 52.5
Nitab4.5_0000986g0090 Nicotiana tabacum HOM05D005907 ORTHO05D007033 4.2e-23 111.7 172 41.9
Lj3A1053G42 Lonicera japonica HOM05D005907 ORTHO05D007033 1.6e-22 109.8 168 43.5
CAN.G998.7 Capsicum annuum HOM05D005907 ORTHO05D007033 7.9e-22 107.5 174 42.0
Cc08_g05990 Coffea canephora HOM05D005907 ORTHO05D007033 3.9e-21 105.1 182 37.4
GSVIVG01036890001 Vitis vinifera HOM05D005907 ORTHO05D007033 1.9e-20 102.8 180 38.3
Oeu047809.2 Olea europaea HOM05D005907 ORTHO05D007033 4.3e-20 101.7 173 39.9
Solyc08g075290.2 Solanum lycopersicum HOM05D005907 ORTHO05D007033 9.7e-20 100.5 174 38.5
Actinidia01244 Actinidia chinensis HOM05D005907 ORTHO05D007033 2.2e-19 99.4 181 39.2
Atru.chr8.2614 Acer truncatum HOM05D005907 ORTHO05D007033 2.8e-19 99.0 105 51.4
Sopen08g023890 Solanum pennellii HOM05D005907 ORTHO05D007033 3.7e-19 98.6 174 37.9
Oeu046770.1 Olea europaea HOM05D005907 ORTHO05D007033 4.8e-19 98.2 174 39.7
Haze_08422 Corylus avellana HOM05D005907 ORTHO05D007033 8.2e-19 97.4 80 58.8
MSTRG.25750 Avicennia marina HOM05D005907 ORTHO05D007033 1.1e-18 97.1 168 40.5
Cfa012308 Carpinus fangiana HOM05D005907 ORTHO05D007033 1.1e-18 97.1 77 61.0
Migut.A00472 Erythranthe guttata HOM05D005907 ORTHO05D007033 1.1e-18 97.1 169 37.9
Nitab4.5_0006244g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.8e-18 96.3 162 39.5
SalBow4G0438 Salvia bowleyana HOM05D005907 ORTHO05D007033 2.4e-18 95.9 94 51.1
TAR636G1547 Trochodendron aralioides HOM05D005907 ORTHO05D007033 2.4e-18 95.9 118 49.2
Dinv37434 Davidia involucrata HOM05D005907 ORTHO05D007033 3.1e-18 95.5 99 58.6
CiPaw.11G074000 Carya illinoinensis HOM05D005907 ORTHO05D007033 6.9e-18 94.4 182 38.5
Rhsim11G0037900 Rhododendron simsii HOM05D005907 ORTHO05D007033 1.2e-17 93.6 77 59.7
Ciclev10012886m.g Citrus clementina HOM05D005907 ORTHO05D007033 1.5e-17 93.2 77 58.4
Lj2g0019236 Lotus japonicus HOM05D005907 ORTHO05D007033 2.6e-17 92.4 73 57.5
vmacro00100 Vaccinium macrocarpon HOM05D005907 ORTHO05D007033 3.4e-17 92.0 78 59.0
SalBow8G0159 Salvia bowleyana HOM05D005907 ORTHO05D007033 4.5e-17 91.7 161 39.8
CSS0017808 Camellia sinensis var. sinensis HOM05D005907 ORTHO05D007033 5.9e-17 91.3 75 62.7
CANSAT35G1964 Cannabis sativa HOM05D005907 ORTHO05D007033 5.9e-17 91.3 58 70.7
FvH4_5g24980 Fragaria vesca HOM05D005907 ORTHO05D007033 5.9e-17 91.3 69 65.2
FAN18G3850 Fragaria x ananassa HOM05D005907 ORTHO05D007033 5.9e-17 91.3 69 65.2
Lalb_Chr16g0380441 Lupinus albus HOM05D005907 ORTHO05D007033 5.9e-17 91.3 176 34.7
Psat4g109120 Pisum sativum HOM05D005907 ORTHO05D007033 5.9e-17 91.3 116 46.6
Glyma.01G153000 Glycine max HOM05D005907 ORTHO05D007033 7.6e-17 90.9 76 52.6
Potri.004G235000 Populus trichocarpa HOM05D005907 ORTHO05D007033 7.6e-17 90.9 104 49.0
EL10Ac5g12591 Beta vulgaris HOM05D005907 ORTHO05D007033 1.0e-16 90.5 77 54.5
Psat2g145040 Pisum sativum HOM05D005907 ORTHO05D007033 1.0e-16 90.5 176 34.1
FAN04G3107 Fragaria x ananassa HOM05D005907 ORTHO05D007033 1.3e-16 90.1 76 60.5
Medtr5g025640 Medicago truncatula HOM05D005907 ORTHO05D007033 1.3e-16 90.1 165 35.8
SGA_v2.0_scaffold121G33056 Striga asiatica HOM05D005907 ORTHO05D007033 2.2e-16 89.4 73 60.3
Lalb_Chr05g0215181 Lupinus albus HOM05D005907 ORTHO05D007033 2.9e-16 89.0 176 34.7
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea HOM05D005907 ORTHO05D007033 3.8e-16 88.6 76 56.6
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea HOM05D005907 ORTHO05D007033 3.8e-16 88.6 76 56.6
RcHm_v2.0_Chr7g0215261 Rosa chinensis HOM05D005907 ORTHO05D007033 3.8e-16 88.6 107 47.7
Glyma.09G218300 Glycine max HOM05D005907 ORTHO05D007033 5.0e-16 88.2 76 50.0
PGSC0003DMG400001952 Solanum tuberosum HOM05D005907 ORTHO05D007033 6.5e-16 87.8 64 64.1
Medtr8g072220 Medicago truncatula HOM05D005907 ORTHO05D007033 8.5e-16 87.4 173 36.4
Thecc.03G320600 Theobroma cacao HOM05D005907 ORTHO05D007033 1.1e-15 87.0 76 59.2
FAN08G1334 Fragaria x ananassa HOM05D005907 ORTHO05D007033 2.5e-15 85.9 71 60.6
TPR.G8986 Trifolium pratense HOM05D005907 ORTHO05D007033 3.2e-15 85.5 176 33.0
Duzib068G0478 Durio zibethinus HOM05D005907 ORTHO05D007033 5.5e-15 84.7 77 58.4
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 5.5e-15 84.7 76 52.6
Sed0007709 Sechium edule HOM05D005907 ORTHO05D007033 7.2e-15 84.3 101 41.6
Hund14310 Selenicereus undatus HOM05D005907 ORTHO05D007033 9.4e-15 84.0 109 43.1
Gohir.A08G148600 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.2e-14 83.6 73 53.4
Gorai.004G176900 Gossypium raimondii HOM05D005907 ORTHO05D007033 1.2e-14 83.6 73 53.4
Nn3g19120 Nelumbo nucifera HOM05D005907 ORTHO05D007033 1.2e-14 83.6 65 58.5
Manes.15G184500 Manihot esculenta HOM05D005907 ORTHO05D007033 1.6e-14 83.2 76 53.9
Phvul.002G122500 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 1.6e-14 83.2 73 52.1
Eucgr.E01152 Eucalyptus grandis HOM05D005907 ORTHO05D007033 2.1e-14 82.8 75 52.0
Nn1g09337 Nelumbo nucifera HOM05D005907 ORTHO05D007033 2.1e-14 82.8 174 35.1
COL.COLO4_16745 Corchorus olitorius HOM05D005907 ORTHO05D007033 2.7e-14 82.4 73 58.9
Gohir.D08G169700 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.7e-14 82.4 73 53.4
TWI60G0533 Tripterygium wilfordii HOM05D005907 ORTHO05D007033 3.6e-14 82.0 174 33.3
TAR629G0350 Trochodendron aralioides HOM05D005907 ORTHO05D007033 3.6e-14 82.0 58 65.5
PSO339G2078 Papaver somniferum HOM05D005907 ORTHO05D007033 6.1e-14 81.3 172 32.6
Sed0019955 Sechium edule HOM05D005907 ORTHO05D007033 6.1e-14 81.3 71 52.1
Prupe.5G013600 Prunus persica HOM05D005907 ORTHO05D007033 7.9e-14 80.9 76 50.0
Duzib205G2043 Durio zibethinus HOM05D005907 ORTHO05D007033 1.0e-13 80.5 76 55.3
Lalb_Chr09g0325061 Lupinus albus HOM05D005907 ORTHO05D007033 1.0e-13 80.5 73 52.1
PGR042G1103 Punica granatum HOM05D005907 ORTHO05D007033 1.0e-13 80.5 62 66.1
arahy.Tifrunner.gnm1.ann1.93DHY7 Arachis hypogaea HOM05D005907 ORTHO05D007033 3.0e-13 79.0 58 63.8
Thhalv10008873m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 1.1e-12 77.0 165 29.7
HanXRQChr08g0233691 Helianthus annuus HOM05D005907 ORTHO05D007033 1.5e-12 76.6 71 53.5
Phvul.003G278300 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 3.3e-12 75.5 73 53.4
Glyma.16G076400 Glycine max HOM05D005907 ORTHO05D007033 5.7e-12 74.7 69 55.1
ATR0568G210 Amborella trichopoda HOM05D005907 ORTHO05D007033 9.7e-12 73.9 54 57.4
Gohir.A12G201000 Gossypium hirsutum HOM05D005907 ORTHO05D007033 9.7e-12 73.9 74 50.0
AL1G45790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 1.3e-11 73.6 175 28.6
PGR031G0343 Punica granatum HOM05D005907 ORTHO05D007033 1.3e-11 73.6 163 33.1
Sed0021253 Sechium edule HOM05D005907 ORTHO05D007033 1.7e-11 73.2 59 49.2
A08p10440 Brassica napus HOM05D005907 ORTHO05D007033 2.8e-11 72.4 163 28.2
ClCG07G011130 Citrullus lanatus HOM05D005907 ORTHO05D007033 2.8e-11 72.4 57 50.9
Gohir.D12G203800 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.8e-11 72.4 73 49.3
BraA08t33042Z Brassica rapa HOM05D005907 ORTHO05D007033 4.8e-11 71.6 74 40.5
CsaV3_4G007120 Cucumis sativus L. HOM05D005907 ORTHO05D007033 4.8e-11 71.6 57 49.1
Gorai.008G218600 Gossypium raimondii HOM05D005907 ORTHO05D007033 6.3e-11 71.2 72 48.6
MD06G1011300 Malus domestica HOM05D005907 ORTHO05D007033 8.2e-11 70.9 76 46.1
Manes.17G003749 Manihot esculenta HOM05D005907 ORTHO05D007033 8.2e-11 70.9 182 30.8
THA.LOC104806200 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 1.1e-10 70.5 174 30.5
THA.LOC104814387 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 1.1e-10 70.5 73 45.2
CARHR031020 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.4e-10 69.3 74 43.2
Sp1g27370 Schrenkiella parvula HOM05D005907 ORTHO05D007033 2.4e-10 69.3 150 28.0
BcaC07g37737 Brassica carinata HOM05D005907 ORTHO05D007033 4.1e-10 68.6 163 27.6
BolC8t48118H Brassica oleracea HOM05D005907 ORTHO05D007033 4.1e-10 68.6 163 27.6
Carub.0001s3002 Capsella rubella HOM05D005907 ORTHO05D007033 4.1e-10 68.6 168 29.8
VMungo0251G3198 Vigna mungo HOM05D005907 ORTHO05D007033 5.3e-10 68.2 73 49.3
Zm00001eb251950 Zea mays HOM05D005907 ORTHO05D007033 6.9e-10 67.8 55 49.1
Aa31LG2G14390 Aethionema arabicum HOM05D005907 ORTHO05D007033 1.2e-09 67.0 74 40.5
ClCG11G016110 Citrullus lanatus HOM05D005907 ORTHO05D007033 1.2e-09 67.0 68 44.1
ECA233G3754 Erigeron canadensis HOM05D005907 ORTHO05D007033 1.5e-09 66.6 54 63.0
AT1G31720 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 2.6e-09 65.9 67 41.8
Sc07g0008040 Simmondsia chinensis HOM05D005907 ORTHO05D007033 2.6e-09 65.9 77 45.5
BcaB04g18131 Brassica carinata HOM05D005907 ORTHO05D007033 1.0e-08 63.9 145 28.3
unitig_37.g12906 Utricularia gibba HOM05D005907 ORTHO05D007033 1.0e-08 63.9 58 50.0
AT4G19370 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 2.2e-08 62.8 69 39.1
CDE01G0013 Ceratophyllum demersum HOM05D005907 ORTHO05D007033 5.0e-08 61.6 81 39.5
Carub.0007s2186 Capsella rubella HOM05D005907 ORTHO05D007033 6.5e-08 61.2 69 37.7
Aa31LG6G1970 Aethionema arabicum HOM05D005907 ORTHO05D007033 8.5e-08 60.8 79 38.0
AL7G34790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 3.2e-07 58.9 64 37.5
BcaC09g51418 Brassica carinata HOM05D005907 ORTHO05D007033 4.2e-07 58.5 66 39.4
A01p11320 Brassica napus HOM05D005907 ORTHO05D007033 4.2e-07 58.5 66 39.4
C01p13330 Brassica napus HOM05D005907 ORTHO05D007033 4.2e-07 58.5 66 39.4
BolC1t01308H Brassica oleracea HOM05D005907 ORTHO05D007033 4.2e-07 58.5 66 39.4
BraA01t01076Z Brassica rapa HOM05D005907 ORTHO05D007033 4.2e-07 58.5 66 39.4
Sp4g03880 Schrenkiella parvula HOM05D005907 ORTHO05D007033 4.2e-07 58.5 68 39.7
BcaNung01784 Brassica carinata HOM05D005907 ORTHO05D007033 7.2e-07 57.8 157 26.8
Thhalv10026210m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 1.2e-06 57.0 67 37.3
CARHR226160 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.1e-06 56.2 64 35.9
Sp7g17980 Schrenkiella parvula HOM05D005907 ORTHO05D007033 2.1e-06 56.2 63 36.5
Os02g0703300 Oryza sativa ssp. japonica HOM05D005907 ORTHO05D007033 2.7e-06 55.8 42 42.9
RcHm_v2.0_Chr5g0061411 Rosa chinensis HOM05D029741 ORTHO05D007033 7.9e-06 54.3 36 66.7


User provided reference genes

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