Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.1e-90 336.7 174 100.0
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 2.3e-56 222.6 166 80.7
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.3e-43 180.3 173 65.9
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 2.1e-41 172.9 162 67.3
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 6.7e-40 167.9 168 64.3
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 1.7e-38 163.3 159 64.8
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 7.7e-36 154.5 173 60.7
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 7.5e-31 137.9 178 54.5
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 8.6e-27 124.4 158 55.7
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.5e-26 122.9 157 55.4
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 4.2e-26 122.1 157 55.4
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 2.8e-25 119.4 141 59.6
Nitab4.5_0002483g0030 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.8e-24 116.7 156 52.6
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 7.5e-23 111.3 140 57.9
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 1.7e-22 110.2 132 57.6
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 8.3e-22 107.8 151 54.3
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 1.2e-20 104.0 137 49.6
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 7.8e-20 101.3 153 47.7
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 1.0e-19 100.9 156 51.3
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 2.9e-19 99.4 153 49.7
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 6.6e-19 98.2 142 52.1
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.1e-18 97.4 137 48.9
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 1.5e-18 97.1 146 52.1
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.5e-18 97.1 179 43.6
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 1.9e-18 96.7 138 48.6
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 2.5e-18 96.3 100 59.0
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 5.6e-18 95.1 108 57.4
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 5.6e-18 95.1 99 57.6
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.2e-17 94.0 156 42.3
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 2.1e-17 93.2 144 49.3
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 1.0e-16 90.9 141 48.9
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 1.0e-16 90.9 142 49.3
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 2.3e-16 89.7 142 44.4
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.9e-16 87.8 121 49.6
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 8.9e-16 87.8 121 49.6
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.2e-15 87.4 137 47.4
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.5e-15 87.0 112 44.6
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 2.0e-15 86.7 143 44.1
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 2.6e-15 86.3 130 46.2
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 4.4e-15 85.5 123 50.4
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 1.3e-14 84.0 152 43.4
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 1.3e-14 84.0 140 45.0
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 1.7e-14 83.6 150 46.7
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 2.2e-14 83.2 157 47.8
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 2.2e-14 83.2 140 45.7
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 6.4e-14 81.6 133 45.9
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 6.4e-14 81.6 155 42.6
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 1.1e-13 80.9 130 48.5
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.1e-13 80.9 88 52.3
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 1.8e-13 80.1 133 48.9
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 2.4e-13 79.7 148 43.9
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 2.4e-13 79.7 126 46.0
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 4.1e-13 79.0 146 42.5
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 4.1e-13 79.0 119 51.3
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 4.1e-13 79.0 139 42.4
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 5.4e-13 78.6 153 42.5
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 1.2e-12 77.4 127 46.5
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.6e-12 77.0 93 50.5
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 1.6e-12 77.0 121 47.1
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 2.0e-12 76.6 86 54.7
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 2.7e-12 76.3 127 44.9
Nitab4.5_0000303g0180 Nicotiana tabacum HOM05D005065 ORTHO05D005944 2.7e-12 76.3 52 88.5
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 3.5e-12 75.9 142 43.0
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 4.6e-12 75.5 142 43.0
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 4.6e-12 75.5 108 48.1
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 7.8e-12 74.7 104 48.1
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 7.8e-12 74.7 149 41.6
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 1.7e-11 73.6 96 47.9
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 1.7e-11 73.6 140 41.4
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 1.7e-11 73.6 118 46.6
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 2.3e-11 73.2 131 41.2
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 2.3e-11 73.2 139 43.9
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 3.0e-11 72.8 84 50.0
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 3.9e-11 72.4 103 44.7
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 3.9e-11 72.4 121 45.5
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 5.0e-11 72.0 98 45.9
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 5.0e-11 72.0 144 38.9
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 8.6e-11 71.2 143 42.0
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 8.6e-11 71.2 140 41.4
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 8.6e-11 71.2 149 40.3
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 1.9e-10 70.1 127 44.1
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 2.5e-10 69.7 138 41.3
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 3.3e-10 69.3 100 41.0
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 3.3e-10 69.3 100 41.0
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 3.3e-10 69.3 103 43.7
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 4.3e-10 68.9 94 43.6
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 4.3e-10 68.9 142 40.8
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 7.3e-10 68.2 150 41.3
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 7.3e-10 68.2 146 40.4
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 9.5e-10 67.8 141 39.7
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 1.2e-09 67.4 94 40.4
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 2.1e-09 66.6 110 41.8
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 3.6e-09 65.9 148 40.5
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 4.7e-09 65.5 151 39.7
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 6.2e-09 65.1 129 41.9
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 8.0e-09 64.7 92 45.7
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 8.0e-09 64.7 140 47.1
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 8.0e-09 64.7 140 47.1
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 1.1e-08 64.3 128 40.6
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 1.1e-08 64.3 124 39.5
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 1.1e-08 64.3 121 42.1
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 3.1e-08 62.8 124 41.9
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 4.0e-08 62.4 140 42.9
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 4.0e-08 62.4 114 39.5
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 8.9e-08 61.2 146 37.7
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 1.2e-07 60.8 145 37.9
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.5e-07 60.5 128 41.4
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 1.5e-07 60.5 94 41.5
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.5e-07 60.5 77 48.1
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.5e-07 60.5 77 48.1
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 1.5e-07 60.5 145 37.9
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 2.0e-07 60.1 141 41.1
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 2.6e-07 59.7 91 40.7
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.4e-07 59.3 137 38.0
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 3.4e-07 59.3 126 41.3
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 3.4e-07 59.3 130 36.2
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 4.4e-07 58.9 138 38.4
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 7.5e-07 58.2 64 51.6
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 9.8e-07 57.8 132 38.6
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 1.7e-06 57.0 98 41.8
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 2.2e-06 56.6 137 37.2
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 2.2e-06 56.6 137 38.7
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 2.2e-06 56.6 137 37.2
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 2.2e-06 56.6 137 37.2
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 2.2e-06 56.6 137 38.7
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 2.2e-06 56.6 134 38.8
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 2.9e-06 56.2 144 40.3
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 3.7e-06 55.8 99 46.5
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 6.4e-06 55.1 126 38.1
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 6.4e-06 55.1 155 37.4


User provided reference genes

Program Settings