Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.0e-113 412.5 217 100.0
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.8e-106 389.4 221 94.6
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 9.2e-95 350.5 221 85.1
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 6.4e-88 327.8 217 83.9
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.0e-85 320.5 217 82.9
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 1.5e-84 316.6 217 82.0
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 4.3e-76 288.5 223 72.2
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 2.0e-73 279.6 227 70.5
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.2e-70 270.4 224 70.1
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.2e-70 270.4 224 70.1
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 7.8e-70 267.7 219 68.0
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 5.1e-69 265.0 233 66.1
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 2.1e-67 259.6 204 70.1
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 4.7e-67 258.5 215 69.3
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 6.2e-67 258.1 221 68.8
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 1.4e-66 256.9 217 68.7
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 1.8e-66 256.5 183 78.7
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 2.3e-66 256.1 215 67.9
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 2.3e-66 256.1 212 67.5
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 6.8e-66 254.6 196 74.5
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 8.9e-66 254.2 186 73.7
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 8.9e-66 254.2 201 71.6
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 1.2e-65 253.8 225 67.6
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.2e-65 253.8 217 68.2
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.2e-65 253.8 220 66.8
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 1.5e-65 253.4 209 68.4
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 1.5e-65 253.4 197 72.6
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 2.0e-65 253.1 212 69.3
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.0e-65 253.1 212 69.3
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 2.0e-65 253.1 182 74.7
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.6e-65 252.7 217 68.2
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 2.6e-65 252.7 220 67.7
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 4.4e-65 251.9 220 65.0
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 4.4e-65 251.9 220 65.0
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 5.8e-65 251.5 212 69.3
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 7.6e-65 251.1 188 74.5
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 7.6e-65 251.1 188 74.5
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 7.6e-65 251.1 188 74.5
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 9.9e-65 250.8 212 68.9
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 9.9e-65 250.8 217 67.7
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.7e-64 250.0 189 74.6
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 1.7e-64 250.0 189 73.0
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 2.2e-64 249.6 188 73.9
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 2.9e-64 249.2 193 72.5
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 3.8e-64 248.8 185 74.6
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 4.9e-64 248.4 167 80.8
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 8.4e-64 247.7 218 66.5
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 1.4e-63 246.9 188 72.9
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 2.4e-63 246.1 220 67.7
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 2.4e-63 246.1 212 66.5
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 2.4e-63 246.1 219 63.9
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 2.4e-63 246.1 189 71.4
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 4.1e-63 245.4 196 71.4
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 5.4e-63 245.0 204 68.6
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 5.4e-63 245.0 211 67.3
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 9.2e-63 244.2 221 65.6
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 1.6e-62 243.4 205 68.3
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 3.5e-62 242.3 181 75.1
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 3.5e-62 242.3 198 71.2
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 3.5e-62 242.3 213 65.3
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 4.6e-62 241.9 219 66.7
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 6.0e-62 241.5 212 67.5
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 5.1e-61 238.4 209 67.0
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 5.1e-61 238.4 156 82.7
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 6.6e-61 238.0 229 64.6
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 1.9e-60 236.5 209 67.0
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 1.9e-60 236.5 212 66.5
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 3.3e-60 235.7 174 75.9
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 9.6e-60 234.2 151 83.4
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 9.6e-60 234.2 227 62.6
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 1.2e-59 233.8 211 65.4
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 1.6e-59 233.4 219 63.9
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 2.8e-59 232.6 211 63.5
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 6.2e-59 231.5 148 83.8
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 8.1e-59 231.1 179 72.1
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 4.0e-58 228.8 179 74.3
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 2.0e-57 226.5 202 64.4
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 2.6e-57 226.1 214 65.9
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 4.4e-57 225.3 183 69.4
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 3.8e-56 222.2 240 57.1
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 8.4e-56 221.1 167 72.5
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 1.9e-55 219.9 160 75.6
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 5.4e-55 218.4 182 66.5
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 7.8e-54 214.5 213 62.9
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 1.3e-53 213.8 179 66.5
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 1.1e-52 210.7 217 59.4
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 2.8e-51 206.1 207 59.4
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 2.1e-46 189.9 216 57.4
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 9.6e-44 181.0 160 63.8
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 9.6e-44 181.0 214 55.6
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 4.5e-41 172.2 149 66.4
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 7.6e-41 171.4 108 80.6
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 1.9e-39 166.8 118 77.1
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 2.4e-39 166.4 173 56.1
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 7.1e-39 164.9 173 55.5
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 2.1e-38 163.3 107 83.2
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 1.1e-28 131.0 115 63.5
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 2.6e-25 119.8 82 79.3
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 1.7e-24 117.1 82 78.0
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 5.0e-24 115.5 81 74.1
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 1.4e-23 114.0 118 51.7
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 6.1e-22 108.6 87 69.0
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.1e-20 104.4 74 75.7
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 5.7e-20 102.1 103 61.2
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 6.9e-18 95.1 58 87.9
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 4.6e-14 82.4 112 41.1
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 2.0e-09 67.0 48 72.9
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.4e-09 66.2 46 76.1
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 5.9e-09 65.5 111 40.5
Sc03g0008980 Simmondsia chinensis HOM05D007184 ORTHO05D008987 1.0e-08 64.7 43 74.4
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 1.1e-07 61.2 102 35.3
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.9e-06 55.1 37 73.0


User provided reference genes

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