Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 3.5e-166 588.2 293 100.0
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 7.1e-159 563.9 293 96.9
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 6.9e-154 547.4 293 92.2
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 8.7e-149 530.4 293 89.4
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.5e-148 529.6 293 89.1
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.5e-148 529.6 293 89.1
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 2.8e-139 498.8 300 82.7
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.7e-134 482.3 300 81.0
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 3.0e-133 478.8 300 78.7
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 3.9e-133 478.4 299 78.6
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 7.4e-132 474.2 300 78.7
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 7.4e-132 474.2 299 78.3
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 1.5e-129 466.5 295 80.3
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 5.9e-129 464.5 291 80.1
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 1.1e-127 460.3 293 78.5
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.2e-126 456.8 295 77.6
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 2.7e-126 455.7 296 79.1
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 6.1e-126 454.5 295 78.0
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 1.3e-123 446.8 298 75.5
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 3.7e-123 445.3 296 76.4
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 9.1e-122 440.7 290 76.9
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 9.1e-122 440.7 290 76.6
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 5.9e-121 438.0 296 74.7
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 5.9e-121 438.0 290 76.9
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.9e-120 435.6 291 76.3
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 3.8e-120 435.3 295 74.6
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 6.5e-120 434.5 298 71.1
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 1.4e-119 433.3 291 74.9
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.9e-119 433.0 289 75.1
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.9e-119 433.0 289 75.1
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 4.2e-119 431.8 290 76.6
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 4.2e-119 431.8 295 74.2
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 4.2e-119 431.8 277 78.7
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 8.0e-118 427.6 289 73.7
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.8e-117 426.4 289 74.4
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 3.9e-117 425.2 289 73.7
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 5.2e-117 424.9 296 72.6
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 8.8e-117 424.1 293 74.1
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.5e-116 423.3 291 72.2
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.0e-116 422.9 283 76.3
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 9.7e-116 420.6 297 74.1
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 9.7e-116 420.6 297 73.4
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 2.8e-115 419.1 289 73.0
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.7e-115 418.7 291 74.2
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 3.7e-115 418.7 291 73.5
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 6.3e-115 417.9 290 72.4
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 6.3e-115 417.9 291 72.9
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 1.1e-114 417.2 287 73.2
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.1e-114 417.2 284 73.9
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 1.4e-114 416.8 287 72.8
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.4e-114 416.8 289 72.0
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.8e-114 416.4 289 71.6
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.8e-114 416.4 291 73.2
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 2.4e-114 416.0 291 72.9
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 2.4e-114 416.0 288 73.3
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 3.1e-114 415.6 290 72.4
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 3.1e-114 415.6 282 73.8
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 3.1e-114 415.6 291 71.8
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 5.3e-114 414.8 284 74.6
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 5.3e-114 414.8 292 72.6
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 7.0e-114 414.5 290 73.1
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 7.0e-114 414.5 289 70.9
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 9.1e-114 414.1 289 71.6
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 9.1e-114 414.1 290 74.1
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.2e-113 413.7 290 73.1
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 2.6e-113 412.5 296 71.6
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 3.5e-113 412.1 288 72.2
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 4.5e-113 411.8 291 72.2
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 4.5e-113 411.8 297 71.0
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 7.7e-113 411.0 292 72.3
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 1.0e-112 410.6 292 72.3
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 1.3e-112 410.2 292 72.3
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.7e-112 409.8 290 71.4
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.9e-112 409.1 288 71.9
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 3.8e-112 408.7 288 71.9
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 1.1e-111 407.1 297 70.4
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.5e-111 406.8 288 71.5
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 1.5e-111 406.8 294 70.4
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.9e-111 406.4 292 72.9
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 1.9e-111 406.4 284 71.8
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.5e-111 406.0 290 73.8
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 2.5e-111 406.0 288 70.8
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 3.2e-111 405.6 291 70.4
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 3.2e-111 405.6 279 75.3
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 7.2e-111 404.4 289 72.0
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 9.4e-111 404.1 289 72.3
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.4e-111 404.1 288 71.2
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.6e-110 403.3 289 72.0
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 1.6e-110 403.3 287 71.1
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 3.6e-110 402.1 289 70.9
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 4.7e-110 401.7 289 71.6
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 6.1e-110 401.4 292 70.9
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.1e-110 401.4 295 71.2
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 6.1e-110 401.4 289 71.3
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 8.0e-110 401.0 289 71.6
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 8.0e-110 401.0 289 71.6
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.0e-109 400.6 289 71.3
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 1.4e-109 400.2 289 70.6
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 1.4e-109 400.2 284 71.1
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.8e-109 399.8 289 70.9
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.3e-109 399.4 292 69.9
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 2.3e-109 399.4 292 69.9
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 2.3e-109 399.4 292 70.2
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 4.0e-109 398.7 294 69.7
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 5.2e-109 398.3 289 70.2
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 5.2e-109 398.3 289 70.2
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 5.2e-109 398.3 289 70.2
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 5.2e-109 398.3 298 70.5
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 8.8e-109 397.5 280 72.1
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 8.8e-109 397.5 297 70.4
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 8.8e-109 397.5 289 70.6
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.2e-108 397.1 294 70.7
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 2.6e-108 396.0 290 70.3
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 2.6e-108 396.0 284 69.4
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 3.3e-108 395.6 292 70.2
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 4.4e-108 395.2 296 70.6
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 4.4e-108 395.2 284 71.8
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 7.5e-108 394.4 283 72.1
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 7.5e-108 394.4 296 70.6
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.3e-107 393.7 289 70.6
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 1.3e-107 393.7 294 70.1
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.3e-107 393.7 289 70.6
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 4.8e-107 391.7 283 71.7
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 7.0e-106 387.9 293 69.3
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 7.0e-106 387.9 293 69.3
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 9.1e-106 387.5 283 71.0
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 1.0e-104 384.0 291 68.4
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 2.5e-103 379.4 291 68.4
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.2e-103 379.0 293 68.6
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 1.2e-102 377.1 294 68.0
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 2.6e-100 369.4 308 64.6
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 2.8e-99 365.9 296 67.2
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 7.7e-97 357.8 282 64.5
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.0e-96 357.5 245 75.1
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 1.9e-95 353.2 296 65.2
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 3.3e-95 352.4 306 62.1
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 5.5e-95 351.7 306 61.8
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 2.1e-94 349.7 311 60.8
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 2.1e-94 349.7 294 65.0
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 6.1e-94 348.2 294 65.0
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 4.9e-91 338.6 294 62.2
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 2.5e-87 326.2 261 64.4
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 1.6e-86 323.6 292 60.3
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 3.7e-83 312.4 294 59.5
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.5e-76 290.4 279 55.2
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 1.4e-74 283.9 192 74.5
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.2e-74 282.7 214 69.2
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 2.5e-71 273.1 278 52.5
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 5.8e-68 261.9 266 53.8
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 2.1e-65 253.4 142 87.3
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 6.6e-64 248.4 276 52.5
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 2.3e-56 223.4 282 46.8
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 3.9e-56 222.6 164 69.5
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 2.1e-54 216.9 265 49.8
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 1.4e-53 214.2 135 77.0
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 1.9e-50 203.8 131 75.6
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.2e-41 174.5 152 59.9
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 3.4e-28 129.8 99 62.6
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 3.8e-27 126.3 332 29.2
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 1.8e-24 117.5 75 80.0
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 6.7e-24 115.5 110 58.2
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 6.3e-22 109.0 110 56.4
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 6.5e-19 99.0 99 57.6
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 2.8e-14 83.6 71 57.7
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-10 71.6 85 51.8
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 9.4e-10 68.6 72 52.8
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 1.3e-06 58.2 67 49.3


User provided reference genes

Program Settings