Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.4e-90 334.0 181 100.0
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 5.0e-86 321.2 177 97.2
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.2e-57 226.1 162 71.0
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.1e-56 222.2 162 78.4
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 3.1e-56 222.2 162 73.5
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 5.0e-54 214.9 163 73.0
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 5.0e-54 214.9 167 68.3
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.5e-53 213.4 159 70.4
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 5.5e-53 211.5 188 64.9
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 9.4e-53 210.7 165 66.1
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.6e-52 209.9 162 68.5
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.6e-52 209.9 162 70.4
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 4.7e-52 208.4 169 72.8
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 6.1e-52 208.0 160 70.6
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.0e-52 207.6 162 72.2
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.8e-51 206.5 163 73.6
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.2e-50 203.8 158 66.5
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.5e-50 203.4 159 66.7
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 3.4e-50 202.2 160 70.6
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 4.4e-50 201.8 161 63.4
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 5.7e-50 201.4 160 66.9
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.7e-49 199.9 160 65.0
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 1.7e-49 199.9 160 68.1
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.2e-49 199.5 160 65.0
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 2.8e-49 199.1 160 70.0
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.8e-49 199.1 160 65.0
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 2.8e-49 199.1 160 61.9
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 6.3e-49 198.0 167 64.1
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 8.3e-49 197.6 175 58.9
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 8.3e-49 197.6 164 70.7
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 1.8e-48 196.4 162 63.6
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 4.1e-48 195.3 159 64.8
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 5.4e-48 194.9 157 68.2
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 5.4e-48 194.9 174 65.5
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 5.4e-48 194.9 160 70.6
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.6e-47 193.4 161 65.2
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 1.6e-47 193.4 160 60.6
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 2.0e-47 193.0 159 64.2
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 2.0e-47 193.0 162 70.4
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 3.5e-47 192.2 164 70.1
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 4.5e-47 191.8 162 63.0
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 4.5e-47 191.8 160 62.5
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 1.0e-46 190.7 159 64.8
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.3e-46 190.3 165 63.0
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.8e-46 188.7 164 71.3
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 6.6e-46 188.0 166 70.5
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 6.6e-46 188.0 160 67.5
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 1.9e-45 186.4 161 66.5
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.9e-45 186.4 165 64.8
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 2.5e-45 186.0 162 59.3
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 2.5e-45 186.0 159 66.7
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 4.2e-45 185.3 161 67.7
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 3.6e-44 182.2 154 63.6
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 3.6e-44 182.2 189 57.1
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 4.7e-44 181.8 180 61.7
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 1.4e-43 180.3 159 66.7
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 3.0e-43 179.1 160 60.0
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 3.0e-43 179.1 123 74.8
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 3.0e-43 179.1 159 61.6
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 5.2e-43 178.3 151 63.6
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 5.2e-43 178.3 160 63.1
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 6.8e-43 177.9 166 63.9
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 8.9e-43 177.6 166 62.7
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 2.0e-42 176.4 169 62.7
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.0e-42 176.4 159 70.4
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.6e-42 176.0 163 60.7
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 9.8e-42 174.1 158 60.8
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.1e-40 170.6 152 57.2
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 2.4e-40 169.5 158 63.3
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 4.1e-40 168.7 166 57.8
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.6e-39 166.8 158 57.0
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.6e-39 166.8 151 69.5
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 2.0e-39 166.4 162 60.5
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 2.7e-39 166.0 147 63.3
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.9e-38 162.2 160 61.2
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.1e-37 160.6 161 60.9
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 3.3e-37 159.1 162 58.6
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 3.3e-37 159.1 159 57.9
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 3.3e-37 159.1 161 54.7
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 5.6e-37 158.3 148 68.9
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 9.5e-37 157.5 163 57.7
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 8.0e-36 154.5 158 53.8
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 8.0e-36 154.5 177 50.8
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.4e-35 153.7 176 52.8
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.3e-35 152.9 159 57.9
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 6.8e-35 151.4 157 56.1
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 1.5e-34 150.2 186 51.1
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.5e-34 150.2 157 52.9
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.6e-34 149.4 150 56.0
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.6e-34 149.4 150 56.0
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 7.5e-34 147.9 150 51.3
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 7.5e-34 147.9 150 51.3
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 9.8e-34 147.5 150 55.3
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.9e-33 146.0 154 55.8
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 4.9e-33 145.2 176 50.6
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 7.0e-32 141.4 157 52.9
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.0e-31 139.8 155 51.6
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.0e-31 139.8 154 55.8
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 3.5e-31 139.0 161 49.1
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.3e-30 137.1 166 50.0
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 1.3e-30 137.1 164 51.8
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 5.6e-29 131.7 153 51.0
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 9.5e-29 131.0 161 51.6
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 9.5e-29 131.0 162 51.2
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 1.6e-28 130.2 144 52.8
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 2.1e-28 129.8 144 52.8
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 2.8e-28 129.4 137 53.3
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 3.6e-28 129.0 144 52.8
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 3.6e-28 129.0 155 52.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 6.2e-28 128.3 164 50.0
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 6.2e-28 128.3 164 50.0
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 1.4e-27 127.1 162 47.5
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 2.3e-27 126.3 160 51.9
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 3.1e-27 125.9 162 45.7
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 3.1e-27 125.9 164 50.0
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 3.1e-27 125.9 164 50.0
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 6.8e-27 124.8 162 46.3
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 6.8e-27 124.8 166 47.0
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 8.9e-27 124.4 144 51.4
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.5e-26 123.6 163 47.9
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.5e-26 123.6 153 49.7
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 4.4e-26 122.1 135 51.1
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 5.8e-26 121.7 173 45.7
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 7.5e-26 121.3 144 49.3
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 1.3e-25 120.6 141 51.8
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 2.9e-25 119.4 165 47.3
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 6.4e-25 118.2 135 49.6
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 8.3e-25 117.9 119 55.5
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 1.1e-24 117.5 129 50.4
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 2.4e-24 116.3 136 54.4
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 2.1e-23 113.2 164 44.5
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 5.1e-22 108.6 172 42.4
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 5.1e-22 108.6 161 41.0
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.6e-22 107.8 93 61.3
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.6e-22 107.8 93 61.3
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 9.5e-21 104.4 154 43.5
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 1.6e-20 103.6 143 46.9
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 4.7e-20 102.1 125 48.8
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 4.7e-20 102.1 162 41.4
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 8.1e-20 101.3 131 43.5
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 1.8e-19 100.1 157 42.7
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 1.2e-18 97.4 154 42.9
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 1.5e-18 97.1 168 41.1
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 9.9e-18 94.4 89 67.4
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.7e-17 92.4 153 44.4
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 6.4e-17 91.7 91 57.1
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 3.2e-16 89.4 154 42.9
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.2e-16 89.4 153 43.1
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.1e-16 89.0 153 43.1
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.1e-16 89.0 153 43.1
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 4.1e-16 89.0 153 43.1
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 1.2e-15 87.4 70 62.9
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.1e-15 86.7 91 51.6
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 6.0e-15 85.1 78 62.8
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 3.0e-14 82.8 106 47.2
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 2.1e-12 76.6 83 53.0
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 2.8e-12 76.3 61 59.0
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 4.7e-12 75.5 71 53.5
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 1.8e-11 73.6 74 50.0
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 5.2e-11 72.0 61 55.7
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.6e-10 69.7 83 54.2
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 7.6e-10 68.2 149 34.9
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.1e-08 64.3 59 59.3
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 4.2e-08 62.4 57 57.9
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 5.4e-08 62.0 53 60.4
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 5.4e-08 62.0 53 60.4
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 7.1e-08 61.6 143 30.8
Peaxi162Scf00462g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 3.0e-06 56.2 53 54.7
Rhsim06G0095600 Rhododendron simsii HOM05D003225 ORTHO05D338509 3.9e-06 55.8 72 52.8
Ciclev10023098m.g Citrus clementina HOM05D004226 ORTHO05D004842 5.1e-06 55.5 55 58.2


User provided reference genes

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