Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009119g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 4.2e-184 647.9 330 100.0
Nitab4.5_0009247g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 7.0e-147 524.2 321 85.7
Nitab4.5_0004440g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 4.9e-140 501.5 325 79.4
Peaxi162Scf00327g00039 Petunia axillaris HOM05D002238 ORTHO05D007272 3.6e-135 485.3 325 75.7
PGSC0003DMG400020787 Solanum tuberosum HOM05D002238 ORTHO05D007272 1.3e-132 476.9 325 73.2
Nitab4.5_0017994g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 4.9e-132 474.9 274 90.5
Sopen08g016790 Solanum pennellii HOM05D002238 ORTHO05D007272 1.1e-128 463.8 325 71.7
Peaxi162Scf00108g00063 Petunia axillaris HOM05D002238 ORTHO05D007272 4.3e-128 461.8 323 74.9
Solyc08g061450.3 Solanum lycopersicum HOM05D002238 ORTHO05D007272 6.2e-127 458.0 325 71.1
Peaxi162Scf00002g00372 Petunia axillaris HOM05D002238 ORTHO05D003453 1.2e-117 427.2 313 71.6
Peaxi162Scf00108g00056 Petunia axillaris HOM05D002238 ORTHO05D007272 2.0e-109 399.8 323 67.2
Cc08_g00970 Coffea canephora HOM05D002238 ORTHO05D007272 2.4e-107 392.9 325 60.9
Dinv30168 Davidia involucrata HOM05D002238 ORTHO05D007272 2.7e-98 362.8 319 60.8
CSS0032500 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D007272 3.5e-98 362.5 320 57.8
Oeu034743.2 Olea europaea HOM05D002238 ORTHO05D007272 6.0e-98 361.7 325 57.5
Haze_00046 Corylus avellana HOM05D002238 ORTHO05D007272 3.9e-97 359.0 326 59.5
Duzib168G0728 Durio zibethinus HOM05D002238 ORTHO05D007272 6.2e-95 351.7 319 59.2
Rhsim02G0195500 Rhododendron simsii HOM05D002238 ORTHO05D007272 8.2e-95 351.3 318 56.0
Rhsim02G0198300 Rhododendron simsii HOM05D002238 ORTHO05D007272 1.1e-94 350.9 318 55.3
Actinidia13250 Actinidia chinensis HOM05D002238 ORTHO05D007272 1.8e-94 350.1 318 57.2
Rhsim09G0014000 Rhododendron simsii HOM05D002238 ORTHO05D007272 1.8e-94 350.1 317 56.2
QL09p012798 Quercus lobata HOM05D002238 ORTHO05D007272 3.1e-94 349.4 328 56.7
Migut.A00055 Erythranthe guttata HOM05D002238 ORTHO05D007272 5.3e-94 348.6 323 54.8
Thecc.09G149800 Theobroma cacao HOM05D002238 ORTHO05D007272 3.4e-93 345.9 316 58.5
Lj8C25T21 Lonicera japonica HOM05D002238 ORTHO05D007272 5.0e-92 342.0 316 57.0
Ciclev10010344m.g Citrus clementina HOM05D002238 ORTHO05D007272 9.3e-91 337.8 326 56.7
Gohir.A09G019700 Gossypium hirsutum HOM05D002238 ORTHO05D007272 1.2e-90 337.4 319 55.8
Eucgr.C01786 Eucalyptus grandis HOM05D002238 ORTHO05D007272 2.1e-90 336.7 328 54.3
COL.COLO4_00195 Corchorus olitorius HOM05D002238 ORTHO05D007272 2.7e-90 336.3 319 57.1
DCAR_006233 Daucus carota HOM05D002238 ORTHO05D007272 4.6e-90 335.5 320 56.2
Peaxi162Scf00365g00022 Petunia axillaris HOM05D002238 ORTHO05D007272 1.0e-89 334.3 323 58.5
Gohir.D09G019000 Gossypium hirsutum HOM05D002238 ORTHO05D007272 1.8e-89 333.6 319 55.8
CiPaw.05G262300 Carya illinoinensis HOM05D002238 ORTHO05D007272 3.9e-89 332.4 326 55.8
Gohir.1Z049673 Gossypium hirsutum HOM05D002238 ORTHO05D007272 8.7e-89 331.3 319 55.5
Manes.16G120100 Manihot esculenta HOM05D002238 ORTHO05D007272 1.9e-88 330.1 323 55.1
unitig_32.g11479 Utricularia gibba HOM05D002238 ORTHO05D007272 3.3e-88 329.3 327 51.1
TAR625G0243 Trochodendron aralioides HOM05D002238 ORTHO05D007272 1.3e-87 327.4 326 52.5
CANSAT54G2252 Cannabis sativa HOM05D002238 ORTHO05D007272 1.1e-86 324.3 324 54.0
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 1.1e-86 324.3 305 59.0
Nn2g11964 Nelumbo nucifera HOM05D002238 ORTHO05D007272 1.1e-86 324.3 327 52.0
FAN24G3345 Fragaria x ananassa HOM05D002238 ORTHO05D007272 3.1e-86 322.8 324 52.2
Gorai.006G022700 Gossypium raimondii HOM05D002238 ORTHO05D007272 5.3e-86 322.0 319 55.2
Prupe.1G474900 Prunus persica HOM05D002238 ORTHO05D007272 5.3e-86 322.0 328 50.6
FvH4_2g29530 Fragaria vesca HOM05D002238 ORTHO05D007272 1.2e-85 320.9 324 51.9
PGR042G2797 Punica granatum HOM05D002238 ORTHO05D007272 1.2e-85 320.9 323 51.1
RcHm_v2.0_Chr6g0298391 Rosa chinensis HOM05D002238 ORTHO05D007272 1.2e-85 320.9 324 51.5
Aqoxy3G03159 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 1.5e-85 320.5 323 51.4
MD08G1146200 Malus domestica HOM05D002238 ORTHO05D007272 2.6e-85 319.7 329 51.7
Potri.006G251400 Populus trichocarpa HOM05D002238 ORTHO05D007272 5.9e-85 318.5 328 54.6
FAN27G0629 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.3e-84 317.4 324 51.5
SGA_v2.0_scaffold20G09144 Striga asiatica HOM05D002238 ORTHO05D007272 3.8e-84 315.8 324 50.6
ClCG05G017070 Citrullus lanatus HOM05D002238 ORTHO05D007272 6.5e-84 315.1 324 51.9
Sc11g0007780 Simmondsia chinensis HOM05D002238 ORTHO05D007272 6.5e-84 315.1 324 51.9
AUR62012126 Chenopodium quinoa HOM05D002238 ORTHO05D007272 8.5e-84 314.7 323 52.0
FAN20G0928 Fragaria x ananassa HOM05D002238 ORTHO05D007272 8.5e-84 314.7 322 51.6
arahy.Tifrunner.gnm1.ann1.U1RD55 Arachis hypogaea HOM05D002238 ORTHO05D007272 1.1e-83 314.3 321 53.0
Cpa.g.sc533.2 Carica papaya HOM05D002238 ORTHO05D007272 1.1e-83 314.3 324 53.1
MBI04_g24206_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D007272 1.1e-83 314.3 320 52.2
Ah.16g102520 Amaranthus hybridus HOM05D002238 ORTHO05D007272 1.4e-83 313.9 323 52.6
THA.LOC104810431 Tarenaya hassleriana HOM05D002238 ORTHO05D007272 9.4e-83 311.2 324 50.9
Sed0000756 Sechium edule HOM05D002238 ORTHO05D007272 6.1e-82 308.5 319 53.0
AUR62040710 Chenopodium quinoa HOM05D002238 ORTHO05D007272 7.9e-82 308.1 323 51.1
Lj5g0011751 Lotus japonicus HOM05D002238 ORTHO05D007272 1.0e-81 307.8 323 52.0
arahy.Tifrunner.gnm1.ann1.H3G4DQ Arachis hypogaea HOM05D002238 ORTHO05D007272 6.7e-81 305.1 315 53.3
arahy.Tifrunner.gnm1.ann1.V2KEMD Arachis hypogaea HOM05D002238 ORTHO05D007272 1.1e-80 304.3 314 53.2
TWI32G0967 Tripterygium wilfordii HOM05D002238 ORTHO05D007272 4.3e-80 302.4 326 50.6
arahy.Tifrunner.gnm1.ann1.TBR9XZ Arachis hypogaea HOM05D002238 ORTHO05D007272 1.7e-79 300.4 316 52.2
Medtr1g031820 Medicago truncatula HOM05D002238 ORTHO05D001984 1.7e-79 300.4 322 50.0
Lalb_Chr25g0279781 Lupinus albus HOM05D002238 ORTHO05D007272 2.2e-79 300.1 312 51.9
PSO017G3814 Papaver somniferum HOM05D002238 ORTHO05D007272 2.8e-79 299.7 332 47.3
arahy.Tifrunner.gnm1.ann1.BAI8MS Arachis hypogaea HOM05D002238 ORTHO05D007272 8.2e-79 298.1 314 52.9
Glyma.05G173000 Glycine max HOM05D002238 ORTHO05D007272 8.2e-79 298.1 323 50.5
Phvul.003G021200 Phaseolus vulgaris HOM05D002238 ORTHO05D007272 1.1e-78 297.7 323 49.8
PSO349G0250 Papaver somniferum HOM05D002238 ORTHO05D007272 1.4e-78 297.4 332 46.7
Aa31LG11G4600 Aethionema arabicum HOM05D002238 ORTHO05D007272 1.8e-78 297.0 323 49.8
VMungo1215G1712 Vigna mungo HOM05D002238 ORTHO05D007272 5.3e-78 295.4 323 50.5
EL10Ac2g04715 Beta vulgaris HOM05D002238 ORTHO05D007272 6.9e-78 295.0 316 50.6
Ca_12577_v3 Cicer arietinum L. HOM05D002238 ORTHO05D007272 9.1e-78 294.7 321 49.2
Thhalv10005310m.g Eutrema salsugineum HOM05D002238 ORTHO05D007272 4.5e-77 292.4 320 49.4
Psat6g044800 Pisum sativum HOM05D002238 ORTHO05D001984 4.5e-77 292.4 317 49.5
arahy.Tifrunner.gnm1.ann1.NZP3ZD Arachis hypogaea HOM05D002238 ORTHO05D007272 1.0e-76 291.2 307 52.8
CARHR187880 Cardamine hirsuta HOM05D002238 ORTHO05D007272 2.2e-76 290.0 321 49.8
AL6G37300 Arabidopsis lyrata HOM05D002238 ORTHO05D007272 2.9e-76 289.7 322 49.1
C07p42320 Brassica napus HOM05D002238 ORTHO05D007272 3.8e-76 289.3 323 49.8
BolC7t44761H Brassica oleracea HOM05D002238 ORTHO05D007272 3.8e-76 289.3 323 49.8
TPR.G36878 Trifolium pratense HOM05D002238 ORTHO05D001984 3.8e-76 289.3 343 46.6
arahy.Tifrunner.gnm1.ann1.Z0G856 Arachis hypogaea HOM05D002238 ORTHO05D007272 1.4e-75 287.3 305 52.8
AT5G25500 Arabidopsis thaliana HOM05D002238 ORTHO05D007272 2.5e-75 286.6 320 48.8
Sp2g22030 Schrenkiella parvula HOM05D002238 ORTHO05D007272 4.2e-75 285.8 320 48.1
Sabra06G0196500 Salix brachista HOM05D002238 ORTHO05D007272 5.5e-75 285.4 326 50.9
Peaxi162Scf00108g00048 Petunia axillaris HOM05D002238 ORTHO05D007272 1.2e-74 284.3 213 73.2
Carub.0006s2336 Capsella rubella HOM05D002238 ORTHO05D007272 2.1e-74 283.5 322 47.5
C02p59480 Brassica napus HOM05D002238 ORTHO05D007272 1.8e-73 280.4 320 47.5
CsaV3_3G046550 Cucumis sativus L. HOM05D002238 ORTHO05D007272 3.9e-73 279.3 319 47.6
BolC2t12011H Brassica oleracea HOM05D002238 ORTHO05D007272 2.0e-72 276.9 320 46.9
A02p39700 Brassica napus HOM05D002238 ORTHO05D007272 3.3e-72 276.2 320 46.6
HPP92_000893 Vanilla planifolia HOM05D002238 ORTHO05D007272 7.4e-72 275.0 318 44.7
MELO3C003684.2 Cucumis melo HOM05D002238 ORTHO05D007272 1.7e-71 273.9 320 47.5
Lsat_1_v5_gn_5_105001 Lactuca sativa HOM05D002238 ORTHO05D007272 1.7e-71 273.9 314 50.0
QL01p053808 Quercus lobata HOM05D002238 ORTHO05D007272 1.7e-71 273.9 253 57.7
BraA02t08935Z Brassica rapa HOM05D002238 ORTHO05D007272 2.8e-71 273.1 320 46.2
Nitab4.5_0013543g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.2e-68 263.5 135 96.3
HanXRQChr13g0402681 Helianthus annuus HOM05D002238 ORTHO05D007272 2.9e-68 263.1 310 46.8
Nitab4.5_0011728g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 7.2e-67 258.5 277 56.7
BraA06t26543Z Brassica rapa HOM05D002238 ORTHO05D007272 9.4e-67 258.1 287 48.8
GSVIVG01035523001 Vitis vinifera HOM05D002238 ORTHO05D007272 1.6e-61 240.7 226 58.0
Nitab4.5_0004440g0040 Nicotiana tabacum HOM05D002238 ORTHO05D007272 5.9e-61 238.8 160 78.1
Nitab4.5_0012587g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.0e-60 238.0 245 58.8
ECA233G3411 Erigeron canadensis HOM05D002238 ORTHO05D007272 1.2e-56 224.6 211 54.0
ATR1156G046 Amborella trichopoda HOM05D002238 ORTHO05D007272 2.6e-56 223.4 264 45.5
Zm00001eb090760 Zea mays HOM05D002238 ORTHO05D007272 1.3e-55 221.1 298 43.0
Duzib187G0736 Durio zibethinus HOM05D002238 ORTHO05D007272 1.7e-55 220.7 214 53.7
SHI18572 Sapria himalayana HOM05D002238 ORTHO05D007272 3.1e-54 216.5 323 39.6
Nitab4.5_0002007g0090 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.6e-53 214.2 205 59.0
Nitab4.5_0002007g0110 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.0e-52 211.5 111 93.7
Peaxi162Scf00015g02010 Petunia axillaris HOM05D002238 ORTHO05D004044 1.7e-52 210.7 195 61.0
Nitab4.5_0011591g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.9e-52 209.9 110 94.5
Aqoxy5G03332 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 1.5e-48 197.6 206 49.0
Os11g0207300 Oryza sativa ssp. japonica HOM05D002238 ORTHO05D007272 2.6e-48 196.8 320 36.2
Glyma.09G122801 Glycine max HOM05D002238 ORTHO05D007272 4.9e-47 192.6 179 53.6
QL10p065634 Quercus lobata HOM05D002238 ORTHO05D007272 4.9e-47 192.6 194 54.1
MD15G1119600 Malus domestica HOM05D002238 ORTHO05D007272 1.1e-46 191.4 206 49.5
Atru.chr7.2387 Acer truncatum HOM05D002238 ORTHO05D007272 4.2e-43 179.5 160 56.2
MD15G1122300 Malus domestica HOM05D002238 ORTHO05D007272 1.2e-40 171.4 201 47.3
SEGI_41370 Sequoiadendron giganteum HOM05D002238 ORTHO05D007272 3.9e-36 156.4 313 31.9
BcaNung07110 Brassica carinata HOM05D002238 ORTHO05D007272 3.6e-34 149.8 164 47.6
SalBow7G3196 Salvia bowleyana HOM05D002238 ORTHO05D007272 1.2e-29 134.8 116 54.3
A06p36210 Brassica napus HOM05D002238 ORTHO05D007272 2.7e-29 133.7 179 45.8
Atru.chr7.2264 Acer truncatum HOM05D002238 ORTHO05D007272 3.9e-28 129.8 136 51.5
SalBow6G2105 Salvia bowleyana HOM05D002238 ORTHO05D007272 1.5e-27 127.9 119 52.1
Nitab4.5_0002007g0100 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.6e-26 124.4 87 79.3
Nitab4.5_0012587g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 7.5e-24 115.5 82 75.6
Nitab4.5_0011728g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.7e-23 114.4 82 75.6
BcaB07g29994 Brassica carinata HOM05D002238 ORTHO05D007272 1.4e-22 111.3 145 43.4
Nitab4.5_0011591g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 6.0e-21 105.9 74 79.7
QL10p065406 Quercus lobata HOM05D002238 ORTHO05D007272 1.1e-17 95.1 193 35.2
MD15G1118500 Malus domestica HOM05D002238 ORTHO05D007272 1.7e-12 77.8 93 41.9


User provided reference genes

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