Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009102g0020 Nicotiana tabacum HOM05D002932 ORTHO05D003208 1.1e-104 383.3 189 100.0
Peaxi162Scf00618g00627 Petunia axillaris HOM05D002932 ORTHO05D003208 6.6e-49 198.0 195 59.0
Nitab4.5_0000485g0080 Nicotiana tabacum HOM05D002932 ORTHO05D003208 9.3e-35 151.0 87 89.7
Sopen03g003700 Solanum pennellii HOM05D002932 ORTHO05D003208 3.3e-32 142.5 196 50.5
Solyc03g007775.2 Solanum lycopersicum HOM05D002932 ORTHO05D003208 7.3e-32 141.4 197 49.7
CSS0021611 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 1.3e-31 140.6 201 44.8
Actinidia03151 Actinidia chinensis HOM05D002932 ORTHO05D003208 2.8e-31 139.4 184 47.3
CAN.G204.10 Capsicum annuum HOM05D002932 ORTHO05D003208 4.8e-31 138.7 180 48.3
Dinv35290 Davidia involucrata HOM05D002932 ORTHO05D003208 1.8e-30 136.7 191 47.6
CAN.G926.8 Capsicum annuum HOM05D002932 ORTHO05D003208 4.0e-30 135.6 200 48.0
Dinv28362 Davidia involucrata HOM05D002932 ORTHO05D003208 2.0e-29 133.3 191 47.6
COL.COLO4_30256 Corchorus olitorius HOM05D002932 ORTHO05D003208 9.9e-29 131.0 204 44.6
PGSC0003DMG400019964 Solanum tuberosum HOM05D002932 ORTHO05D003208 9.9e-29 131.0 199 47.2
Manes.06G154700 Manihot esculenta HOM05D002932 ORTHO05D003208 1.3e-28 130.6 190 44.7
Hma1.2p1_0142F.1_g064300 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 1.1e-27 127.5 192 46.4
Glyma.20G164000 Glycine max HOM05D002932 ORTHO05D003208 1.4e-27 127.1 189 44.4
Duzib084G0326 Durio zibethinus HOM05D002932 ORTHO05D003208 2.4e-27 126.3 198 45.5
TWI23G0695 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 2.4e-27 126.3 192 42.2
Sabra12G0024300 Salix brachista HOM05D002932 ORTHO05D003208 3.2e-27 125.9 197 47.7
VMungo0464G0277 Vigna mungo HOM05D002932 ORTHO05D003208 3.2e-27 125.9 187 44.9
Ciclev10005884m.g Citrus clementina HOM05D002932 ORTHO05D003208 4.2e-27 125.6 203 44.3
Duzib205G0983 Durio zibethinus HOM05D002932 ORTHO05D003208 4.2e-27 125.6 202 43.6
Cfa016327 Carpinus fangiana HOM05D002932 ORTHO05D003208 5.4e-27 125.2 201 43.8
Peaxi162Scf00904g00468 Petunia axillaris HOM05D002932 ORTHO05D003208 7.1e-27 124.8 165 55.8
Thecc.03G188500 Theobroma cacao HOM05D002932 ORTHO05D003208 7.1e-27 124.8 203 43.3
Duzib068G0647 Durio zibethinus HOM05D002932 ORTHO05D003208 9.3e-27 124.4 203 44.3
Potri.012G035200 Populus trichocarpa HOM05D002932 ORTHO05D003208 1.2e-26 124.0 193 47.2
Cpa.g.sc3.12 Carica papaya HOM05D002932 ORTHO05D003208 2.1e-26 123.2 196 44.9
Phvul.007G077100 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 2.1e-26 123.2 190 44.2
Haze_00079 Corylus avellana HOM05D002932 ORTHO05D003208 4.6e-26 122.1 201 43.3
TWI14G1190 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 4.6e-26 122.1 189 42.3
GSVIVG01028788001 Vitis vinifera HOM05D003816 ORTHO05D004410 1.0e-25 120.9 192 43.8
Phvul.004G102700 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 1.3e-25 120.6 190 43.7
Glyma.10G229200 Glycine max HOM05D002932 ORTHO05D003208 1.8e-25 120.2 194 41.2
VMungo0720G0620 Vigna mungo HOM05D002932 ORTHO05D003208 1.8e-25 120.2 197 43.1
Actinidia31853 Actinidia chinensis HOM05D002932 ORTHO05D003208 3.0e-25 119.4 152 48.0
Prupe.2G304400 Prunus persica HOM05D002932 ORTHO05D003208 3.0e-25 119.4 207 39.6
Sabra15G0019600 Salix brachista HOM05D002932 ORTHO05D003208 3.0e-25 119.4 208 43.8
Actinidia08604 Actinidia chinensis HOM05D002932 ORTHO05D003208 3.9e-25 119.0 202 41.1
Manes.14G020200 Manihot esculenta HOM05D002932 ORTHO05D003208 3.9e-25 119.0 188 43.1
Oeu037130.1 Olea europaea HOM05D002932 ORTHO05D003208 3.9e-25 119.0 191 44.5
Sabra15G0022400 Salix brachista HOM05D002932 ORTHO05D003208 6.7e-25 118.2 208 43.3
PGR042G1004 Punica granatum HOM05D002932 ORTHO05D003208 1.1e-24 117.5 200 40.5
TPR.G7742 Trifolium pratense HOM05D002932 ORTHO05D003208 1.5e-24 117.1 190 40.0
Gohir.A12G254433 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.9e-24 116.7 201 40.8
Medtr1g099440 Medicago truncatula HOM05D002932 ORTHO05D003208 2.5e-24 116.3 204 40.2
MD01G1211600 Malus domestica HOM05D002932 ORTHO05D003208 3.3e-24 115.9 208 37.0
QL09p012032 Quercus lobata HOM05D002932 ORTHO05D003208 4.3e-24 115.5 205 41.5
Rhsim09G0202600 Rhododendron simsii HOM05D002932 ORTHO05D003208 4.3e-24 115.5 192 39.6
SalBow4G2867 Salvia bowleyana HOM05D002932 ORTHO05D003208 4.3e-24 115.5 190 44.7
FAN10G0880 Fragaria x ananassa HOM05D002932 ORTHO05D003208 9.6e-24 114.4 203 39.4
FAN10G1573 Fragaria x ananassa HOM05D002932 ORTHO05D003208 9.6e-24 114.4 203 39.4
Lalb_Chr21g0305311 Lupinus albus HOM05D002932 ORTHO05D003208 9.6e-24 114.4 191 41.9
Glyma.09G126400 Glycine max HOM05D002932 ORTHO05D003208 1.3e-23 114.0 206 42.2
Gohir.D12G255000 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.3e-23 114.0 205 41.0
Gorai.008G272600 Gossypium raimondii HOM05D002932 ORTHO05D003208 1.3e-23 114.0 205 41.0
Lalb_Chr03g0035141 Lupinus albus HOM05D002932 ORTHO05D003208 2.1e-23 113.2 191 41.9
Psat0s694g0080 Pisum sativum HOM05D002932 ORTHO05D003208 4.8e-23 112.1 191 40.8
MD07G1282200 Malus domestica HOM05D002932 ORTHO05D003208 8.1e-23 111.3 203 38.4
Potri.015G026600 Populus trichocarpa HOM05D002932 ORTHO05D003208 8.1e-23 111.3 209 41.1
RcHm_v2.0_Chr1g0379591 Rosa chinensis HOM05D002932 ORTHO05D003208 8.1e-23 111.3 204 38.7
Lalb_Chr02g0141341 Lupinus albus HOM05D002932 ORTHO05D003208 1.1e-22 110.9 194 38.7
Oeu009283.1 Olea europaea HOM05D002932 ORTHO05D003208 1.1e-22 110.9 206 39.8
FvH4_7g30650 Fragaria vesca HOM05D002932 ORTHO05D003208 3.1e-22 109.4 203 37.9
FAN06G0995 Fragaria x ananassa HOM05D002932 ORTHO05D003208 3.1e-22 109.4 203 37.9
Glyma.16G173400 Glycine max HOM05D002932 ORTHO05D003208 3.1e-22 109.4 203 40.9
FAN03G0587 Fragaria x ananassa HOM05D002932 ORTHO05D003208 4.0e-22 109.0 203 37.9
PGSC0003DMG400028894 Solanum tuberosum HOM05D002932 ORTHO05D003208 4.0e-22 109.0 173 43.9
CANSAT21G2430 Cannabis sativa HOM05D002932 ORTHO05D003208 1.2e-21 107.5 221 40.3
TPR.G36623 Trifolium pratense HOM05D002932 ORTHO05D003208 1.5e-21 107.1 212 38.7
CiPaw.06G005800 Carya illinoinensis HOM05D002932 ORTHO05D003208 2.0e-21 106.7 195 41.5
Migut.F00261 Erythranthe guttata HOM05D002932 ORTHO05D003208 2.0e-21 106.7 213 41.3
ClCG05G008540 Citrullus lanatus HOM05D002932 ORTHO05D003208 2.6e-21 106.3 193 42.5
arahy.Tifrunner.gnm1.ann1.N7QM32 Arachis hypogaea HOM05D002932 ORTHO05D003208 3.4e-21 105.9 217 37.3
Lsat_1_v5_gn_2_133581 Lactuca sativa HOM05D002932 ORTHO05D003208 3.4e-21 105.9 188 39.9
Lj5g0016966 Lotus japonicus HOM05D002932 ORTHO05D003208 3.4e-21 105.9 198 42.4
arahy.Tifrunner.gnm1.ann1.M5AIDB Arachis hypogaea HOM05D002932 ORTHO05D003208 5.8e-21 105.1 217 38.2
vmacro06597 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 5.8e-21 105.1 185 40.0
MELO3C006960.2 Cucumis melo HOM05D002932 ORTHO05D003208 1.3e-20 104.0 193 40.9
Sed0015119 Sechium edule HOM05D002932 ORTHO05D003208 1.3e-20 104.0 192 40.1
CsaV3_3G021720 Cucumis sativus L. HOM05D002932 ORTHO05D003208 2.2e-20 103.2 197 40.1
Medtr6g034060 Medicago truncatula HOM05D002932 ORTHO05D003208 4.9e-20 102.1 206 39.8
Rhsim03G0196300 Rhododendron simsii HOM05D002932 ORTHO05D003208 3.2e-19 99.4 187 38.5
TPR.G36701 Trifolium pratense HOM05D002932 ORTHO05D003208 3.2e-19 99.4 215 35.8
Lalb_Chr01g0009541 Lupinus albus HOM05D002932 ORTHO05D003208 4.2e-19 99.0 202 36.1
Sed0008251 Sechium edule HOM05D002932 ORTHO05D003208 5.5e-19 98.6 193 39.4
Ah.07g206300 Amaranthus hybridus HOM05D002932 ORTHO05D003208 9.3e-19 97.8 203 37.4
Lj2g0001659 Lotus japonicus HOM05D002932 ORTHO05D003208 1.2e-18 97.4 209 36.8
Psat1g099240 Pisum sativum HOM05D002932 ORTHO05D003208 1.2e-18 97.4 197 40.6
TAR374G1073 Trochodendron aralioides HOM05D002932 ORTHO05D003208 1.2e-18 97.4 188 40.4
Eucgr.A02685 Eucalyptus grandis HOM05D002932 ORTHO05D003208 2.1e-18 96.7 192 36.5
Psat1g106560 Pisum sativum HOM05D002932 ORTHO05D003208 2.7e-18 96.3 208 37.5
Eucgr.K00306 Eucalyptus grandis HOM05D002932 ORTHO05D003208 6.0e-18 95.1 202 38.1
FAN01G1179 Fragaria x ananassa HOM05D002932 ORTHO05D003208 7.9e-18 94.7 195 36.4
FAN06G4297 Fragaria x ananassa HOM05D002932 ORTHO05D003208 7.9e-18 94.7 195 36.4
Atru.chr1.321 Acer truncatum HOM05D002932 ORTHO05D003208 1.3e-17 94.0 216 37.5
ClCG01G000790 Citrullus lanatus HOM05D002932 ORTHO05D003208 1.3e-17 94.0 178 40.4
A03p15470 Brassica napus HOM05D002932 ORTHO05D003208 3.9e-17 92.4 203 36.9
BraA03t10842Z Brassica rapa HOM05D002932 ORTHO05D003208 3.9e-17 92.4 203 36.9
Psat1g099360 Pisum sativum HOM05D002932 ORTHO05D003208 5.1e-17 92.0 197 40.1
Sopen06g012200 Solanum pennellii HOM05D002932 ORTHO05D003208 5.1e-17 92.0 173 38.7
C03p18060 Brassica napus HOM05D002932 ORTHO05D003208 6.7e-17 91.7 197 38.1
BolC3t14211H Brassica oleracea HOM05D002932 ORTHO05D003208 6.7e-17 91.7 197 38.1
ECA238G1001 Erigeron canadensis HOM05D002932 ORTHO05D003208 6.7e-17 91.7 180 37.8
Gohir.D11G013600 Gossypium hirsutum HOM05D002932 ORTHO05D003208 8.7e-17 91.3 200 34.5
HanXRQChr13g0392281 Helianthus annuus HOM05D002932 ORTHO05D003208 8.7e-17 91.3 202 40.1
Medtr6g034055 Medicago truncatula HOM05D002932 ORTHO05D003208 1.1e-16 90.9 208 36.1
Ah.13g069610 Amaranthus hybridus HOM05D002932 ORTHO05D003208 1.5e-16 90.5 202 34.2
Psat1g099320 Pisum sativum HOM05D002932 ORTHO05D003208 1.5e-16 90.5 193 37.8
MELO3C005851.2 Cucumis melo HOM05D002932 ORTHO05D003208 1.9e-16 90.1 185 37.8
Gohir.A11G013400 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.9e-16 90.1 198 34.3
TAR629G3108 Trochodendron aralioides HOM05D002932 ORTHO05D003208 1.9e-16 90.1 186 37.6
THA.LOC104825123 Tarenaya hassleriana HOM05D002932 ORTHO05D003208 2.5e-16 89.7 198 36.9
C09p42630 Brassica napus HOM05D002932 ORTHO05D003208 3.3e-16 89.4 194 36.1
BolC9t57139H Brassica oleracea HOM05D002932 ORTHO05D003208 3.3e-16 89.4 194 36.1
PGR142G0585 Punica granatum HOM05D002932 ORTHO05D003208 3.3e-16 89.4 190 37.4
BcaB01g04222 Brassica carinata HOM05D002932 ORTHO05D003208 4.3e-16 89.0 210 36.2
BcaC01g06213 Brassica carinata HOM05D002932 ORTHO05D003208 4.3e-16 89.0 192 38.0
Aa31LG3G9150 Aethionema arabicum HOM05D002932 ORTHO05D003208 5.6e-16 88.6 174 37.4
Medtr6g034050 Medicago truncatula HOM05D002932 ORTHO05D003208 5.6e-16 88.6 183 39.3
A10p10380 Brassica napus HOM05D002932 ORTHO05D003208 7.4e-16 88.2 194 36.1
BraA10t43121Z Brassica rapa HOM05D002932 ORTHO05D003208 7.4e-16 88.2 194 36.1
THA.LOC104811937 Tarenaya hassleriana HOM05D002932 ORTHO05D003208 7.4e-16 88.2 198 36.4
Gorai.007G013900 Gossypium raimondii HOM05D002932 ORTHO05D003208 9.6e-16 87.8 183 34.4
EL10Ac3g05377 Beta vulgaris HOM05D002932 ORTHO05D003208 2.1e-15 86.7 201 35.8
HanXRQChr14g0462641 Helianthus annuus HOM05D002932 ORTHO05D003208 2.1e-15 86.7 177 35.6
BraA02t06216Z Brassica rapa HOM05D002932 ORTHO05D003208 2.8e-15 86.3 210 35.2
TAR636G0499 Trochodendron aralioides HOM05D002932 ORTHO05D003208 2.8e-15 86.3 195 36.4
Atru.ctg97_1.61 Acer truncatum HOM05D002932 ORTHO05D003208 3.7e-15 85.9 191 36.6
BcaC04g20524 Brassica carinata HOM05D002932 ORTHO05D003208 4.8e-15 85.5 194 36.1
Sp6g15070 Schrenkiella parvula HOM05D002932 ORTHO05D003208 6.2e-15 85.1 192 34.4
BcaB08g35654 Brassica carinata HOM05D002932 ORTHO05D003208 1.8e-14 83.6 201 33.8
Thhalv10014576m.g Eutrema salsugineum HOM05D002932 ORTHO05D003208 1.8e-14 83.6 190 34.2
Sed0018025 Sechium edule HOM05D002932 ORTHO05D003208 1.8e-14 83.6 184 35.9
Solyc06g036460.4 Solanum lycopersicum HOM05D002932 ORTHO05D003208 4.0e-14 82.4 86 54.7
C02p19170 Brassica napus HOM05D002932 ORTHO05D003208 5.3e-14 82.0 210 34.8
A02p11520 Brassica napus HOM05D002932 ORTHO05D003208 6.9e-14 81.6 205 34.6
BcaC03g14485 Brassica carinata HOM05D002932 ORTHO05D003208 9.0e-14 81.3 205 34.6
CsaV3_5G000930 Cucumis sativus L. HOM05D002932 ORTHO05D003208 9.0e-14 81.3 184 34.8
AT5G52900 Arabidopsis thaliana HOM05D002932 ORTHO05D003208 1.2e-13 80.9 198 33.3
BolC2t08047H Brassica oleracea HOM05D002932 ORTHO05D003208 2.0e-13 80.1 205 33.7
Carub.0008s1309 Capsella rubella HOM05D002932 ORTHO05D003208 2.0e-13 80.1 195 33.3
BcaB05g21990 Brassica carinata HOM05D002932 ORTHO05D003208 5.8e-13 78.6 204 35.3
CARHR265860 Cardamine hirsuta HOM05D002932 ORTHO05D003208 1.3e-12 77.4 201 31.3
Sc19g0001040 Simmondsia chinensis HOM05D002932 ORTHO05D003208 2.9e-12 76.3 178 34.8
AUR62021078 Chenopodium quinoa HOM05D002932 ORTHO05D003208 3.8e-12 75.9 191 33.0
AL8G27370 Arabidopsis lyrata HOM05D002932 ORTHO05D003208 4.9e-12 75.5 210 32.9
MSTRG.27064 Avicennia marina HOM05D002932 ORTHO05D003208 1.1e-11 74.3 144 41.0
HanXRQChr07g0207101 Helianthus annuus HOM05D002932 ORTHO05D003208 1.1e-11 74.3 178 31.5
Nn7g37319 Nelumbo nucifera HOM05D002932 ORTHO05D003208 1.4e-11 73.9 188 36.2
CSS0045579 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 2.1e-10 70.1 127 38.6
AUR62031454 Chenopodium quinoa HOM05D002932 ORTHO05D003208 2.7e-10 69.7 192 31.2
Nn1g01736 Nelumbo nucifera HOM05D002932 ORTHO05D003208 6.1e-10 68.6 194 35.6
Dinv43873 Davidia involucrata HOM05D002932 ORTHO05D003208 1.0e-09 67.8 189 32.3
MBI07_g44813_MAGBIO Magnolia biondii HOM05D002932 ORTHO05D003208 2.3e-09 66.6 194 32.0
Lsat_1_v5_gn_8_6240 Lactuca sativa HOM05D002932 ORTHO05D003208 1.5e-08 63.9 212 30.7
CSS0001843 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 1.9e-08 63.5 68 52.9
Duzib138G0190 Durio zibethinus HOM05D002932 ORTHO05D003208 3.3e-08 62.8 164 29.3
Potri.014G091500 Populus trichocarpa HOM05D002932 ORTHO05D003208 9.7e-08 61.2 187 32.1
Atru.chr5.594 Acer truncatum HOM05D002932 ORTHO05D003208 2.2e-07 60.1 188 30.3
Manes.01G251500 Manihot esculenta HOM05D002932 ORTHO05D003208 2.2e-07 60.1 163 32.5
COL.COLO4_06371 Corchorus olitorius HOM05D002932 ORTHO05D003208 4.8e-07 58.9 160 30.0
Glyma.01G045900 Glycine max HOM05D002932 ORTHO05D003208 4.8e-07 58.9 171 32.7
Aqoxy1G02826 Aquilegia oxysepala HOM05D002932 ORTHO05D003208 6.3e-07 58.5 218 33.0
Sabra14G0066400 Salix brachista HOM05D002932 ORTHO05D003208 8.2e-07 58.2 198 29.3
vmacro10092 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 1.1e-06 57.8 85 47.1
ECA233G5483 Erigeron canadensis HOM05D002932 ORTHO05D003208 2.4e-06 56.6 39 66.7
Gohir.D08G148800 Gossypium hirsutum HOM05D002932 ORTHO05D003208 2.4e-06 56.6 159 30.2
Gorai.004G154500 Gossypium raimondii HOM05D002932 ORTHO05D003208 2.4e-06 56.6 159 30.2
Gohir.A08G127400 Gossypium hirsutum HOM05D002932 ORTHO05D003208 3.1e-06 56.2 159 30.2
Manes.05G028200 Manihot esculenta HOM05D002932 ORTHO05D003208 3.1e-06 56.2 164 32.3
Ciclev10023540m.g Citrus clementina HOM05D002932 ORTHO05D003208 9.0e-06 54.7 200 30.0


User provided reference genes

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