Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 9.5e-56 219.9 110 100.0
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 6.0e-42 174.1 88 97.7
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.7e-33 146.0 101 72.3
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 8.3e-28 127.1 85 71.8
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 3.5e-26 121.7 86 70.9
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.3e-25 119.0 86 70.9
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 3.0e-25 118.6 87 69.0
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.1e-24 116.7 86 69.8
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.5e-24 116.3 87 66.7
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.5e-24 115.5 85 69.4
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 3.3e-24 115.2 88 64.8
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 4.3e-24 114.8 86 67.4
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 5.6e-24 114.4 84 67.9
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 9.5e-24 113.6 86 68.6
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 8.1e-23 110.5 100 58.0
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 1.4e-22 109.8 93 61.3
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 2.4e-22 109.0 86 66.3
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 4.0e-22 108.2 86 64.0
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 4.0e-22 108.2 86 64.0
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 4.0e-22 108.2 89 65.2
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 5.2e-22 107.8 86 65.1
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 5.2e-22 107.8 94 62.8
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 8.9e-22 107.1 86 61.6
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 2.0e-21 105.9 102 57.8
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.0e-21 105.9 86 65.1
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 2.6e-21 105.5 92 57.6
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 2.6e-21 105.5 86 61.6
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 4.4e-21 104.8 86 62.8
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 5.8e-21 104.4 86 61.6
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 7.6e-21 104.0 86 61.6
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 9.9e-21 103.6 88 64.8
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 9.9e-21 103.6 88 65.9
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 1.7e-20 102.8 91 61.5
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 1.7e-20 102.8 107 53.3
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 2.2e-20 102.4 86 59.3
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 2.9e-20 102.1 86 62.8
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 2.9e-20 102.1 86 61.6
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 4.9e-20 101.3 88 62.5
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 4.9e-20 101.3 99 52.5
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 4.9e-20 101.3 86 62.8
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 6.4e-20 100.9 90 58.9
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 6.4e-20 100.9 88 63.6
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 8.4e-20 100.5 88 63.6
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.4e-19 99.8 88 61.4
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.9e-19 99.4 86 61.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.9e-19 99.4 86 61.6
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.9e-19 99.4 86 60.5
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.9e-19 99.4 99 55.6
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.9e-19 99.4 76 69.7
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 3.2e-19 98.6 88 58.0
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 4.1e-19 98.2 86 60.5
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 4.1e-19 98.2 87 62.1
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 4.1e-19 98.2 88 61.4
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 4.1e-19 98.2 88 63.6
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 7.1e-19 97.4 88 59.1
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 9.2e-19 97.1 90 55.6
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.6e-18 96.3 86 59.3
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.7e-18 95.5 73 64.4
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 3.5e-18 95.1 90 54.4
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 3.5e-18 95.1 88 59.1
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 4.6e-18 94.7 86 55.8
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 4.6e-18 94.7 91 57.1
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 6.0e-18 94.4 86 58.1
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.0e-18 94.4 86 58.1
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.0e-18 94.4 86 58.1
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.8e-18 94.0 73 63.0
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.0e-17 93.6 93 58.1
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.0e-17 93.6 87 57.5
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 1.3e-17 93.2 91 59.3
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.3e-17 92.4 91 54.9
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 3.0e-17 92.0 88 58.0
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 3.0e-17 92.0 88 58.0
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 3.0e-17 92.0 77 62.3
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 5.1e-17 91.3 91 58.2
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 5.1e-17 91.3 87 57.5
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 8.7e-17 90.5 87 57.5
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 2.5e-16 89.0 88 55.7
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 2.5e-16 89.0 87 51.7
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 3.3e-16 88.6 88 54.5
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 3.3e-16 88.6 91 54.9
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 5.6e-16 87.8 87 57.5
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.2e-15 86.7 87 54.0
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 2.1e-15 85.9 88 53.4
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 2.1e-15 85.9 93 54.8
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 3.6e-15 85.1 87 54.0
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 1.4e-14 83.2 87 52.9
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.8e-14 82.8 62 62.9
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 4.0e-14 81.6 87 52.9
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 1.5e-13 79.7 93 51.6
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.3e-12 76.6 51 84.3
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 3.2e-11 72.0 108 47.2
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 4.2e-11 71.6 60 66.7
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 7.1e-11 70.9 58 62.1
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 3.5e-10 68.6 65 53.8
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 4.6e-10 68.2 58 60.3
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 1.1e-08 63.5 55 56.4
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 7.3e-08 60.8 46 58.7
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 1.3e-07 60.1 49 53.1
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.4e-06 56.6 54 61.1


User provided reference genes

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