Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009075g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.7e-67 258.1 130 100.0
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.4e-26 122.5 66 93.9
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.0e-24 117.1 66 92.4
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 4.3e-23 111.7 66 87.9
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 3.1e-21 105.5 66 81.8
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 6.8e-21 104.4 66 81.8
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 8.9e-21 104.0 66 80.3
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 4.4e-20 101.7 84 66.7
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.3e-19 100.1 66 78.8
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 2.2e-19 99.4 66 77.3
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 9.2e-18 94.0 66 74.2
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 1.7e-11 73.2 88 51.1
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 9.3e-10 67.4 89 42.7
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.7e-09 65.9 89 42.7
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 3.5e-09 65.5 60 55.0
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 6.0e-09 64.7 95 41.1
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 7.8e-09 64.3 59 55.9
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 3.9e-08 62.0 65 49.2
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 5.1e-08 61.6 88 40.9
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 8.7e-08 60.8 62 50.0
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 9.6e-07 57.4 67 49.3
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.8e-06 55.8 82 42.7
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 2.8e-06 55.8 62 46.8
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 8.1e-06 54.3 83 42.2


User provided reference genes

Program Settings