Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 9.5e-136 486.9 251 100.0
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.6e-111 405.2 215 94.4
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 6.2e-103 377.9 228 86.4
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 3.2e-99 365.5 212 86.3
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 1.3e-97 360.1 239 79.1
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 2.5e-96 355.9 219 82.6
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 7.6e-93 344.4 208 85.1
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 3.5e-74 282.3 208 69.7
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 6.9e-70 268.1 210 65.7
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.2e-69 267.3 198 72.2
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.0e-68 264.2 232 63.4
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 2.2e-68 263.1 213 66.2
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.4e-67 260.4 212 66.0
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.9e-67 260.0 199 68.8
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 7.2e-67 258.1 226 64.2
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 9.3e-67 257.7 215 65.1
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.6e-66 256.9 226 63.7
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 2.7e-66 256.1 226 63.7
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.7e-66 256.1 211 66.8
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 2.7e-66 256.1 208 64.9
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.3e-65 253.8 211 66.4
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 1.9e-64 250.0 203 63.5
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.9e-64 250.0 229 58.1
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 7.4e-64 248.1 201 64.7
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.6e-63 246.9 221 61.5
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 3.7e-63 245.7 215 63.7
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 4.8e-63 245.4 228 61.8
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 2.4e-62 243.0 191 64.9
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 2.4e-62 243.0 228 57.0
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 4.1e-62 242.3 240 58.8
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 6.9e-62 241.5 220 60.0
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.5e-61 240.4 214 61.7
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 2.0e-61 240.0 216 58.8
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 2.0e-61 240.0 233 58.4
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 2.6e-61 239.6 211 63.0
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 3.4e-61 239.2 207 62.8
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 1.7e-60 236.9 228 59.6
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 2.2e-60 236.5 222 57.2
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 2.9e-60 236.1 216 59.7
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 3.8e-60 235.7 230 58.3
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 3.8e-60 235.7 244 55.3
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 3.8e-60 235.7 204 63.7
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 6.5e-60 235.0 223 58.7
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.1e-59 234.2 230 59.1
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.1e-59 234.2 198 61.6
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.1e-59 234.2 212 59.0
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.1e-59 234.2 219 55.7
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.4e-59 233.8 232 56.0
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 4.2e-59 232.3 209 62.2
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 9.4e-59 231.1 204 59.8
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 1.2e-58 230.7 214 58.4
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 1.6e-58 230.3 226 58.4
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 1.6e-58 230.3 230 57.8
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.6e-58 229.2 207 61.4
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.6e-58 229.2 209 61.7
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 4.6e-58 228.8 242 53.7
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.0e-57 227.6 216 59.7
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 5.1e-57 225.3 205 57.1
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 6.7e-57 224.9 205 61.5
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.5e-56 223.0 214 56.5
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 4.3e-56 222.2 228 56.1
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 4.3e-56 222.2 227 57.7
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 5.7e-56 221.9 208 57.7
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.3e-55 220.7 213 57.7
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.3e-55 220.7 206 55.3
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.7e-55 219.2 216 56.5
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 8.2e-55 218.0 215 60.0
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 8.2e-55 218.0 224 55.4
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 3.1e-54 216.1 252 52.4
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 4.1e-54 215.7 222 55.4
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 4.1e-54 215.7 200 56.0
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.3e-54 215.3 218 60.6
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 6.9e-54 214.9 219 55.7
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.5e-53 213.8 230 54.8
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 2.0e-53 213.4 208 57.7
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 5.9e-53 211.8 226 54.0
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 1.0e-52 211.1 222 54.5
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.0e-52 211.1 210 57.1
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 6.5e-52 208.4 256 50.0
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 8.5e-52 208.0 220 54.1
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.1e-51 207.6 208 56.2
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 3.2e-51 206.1 227 53.3
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 4.2e-51 205.7 226 54.0
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 5.5e-51 205.3 271 46.5
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 5.5e-51 205.3 215 50.7
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 5.5e-51 205.3 212 54.7
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-50 204.1 207 52.7
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-50 204.1 207 52.7
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 2.1e-50 203.4 192 57.8
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 4.7e-50 202.2 229 53.7
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.8e-49 200.3 205 55.1
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 3.0e-49 199.5 200 52.5
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 8.8e-49 198.0 223 53.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.1e-48 197.6 209 53.6
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.1e-48 197.6 220 50.5
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.1e-48 197.6 231 51.1
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.5e-48 197.2 205 51.2
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 2.0e-48 196.8 226 51.3
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 2.6e-48 196.4 222 53.6
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 2.6e-48 196.4 222 53.6
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 2.6e-48 196.4 163 61.3
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 3.3e-48 196.1 201 52.7
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 4.4e-48 195.7 223 53.4
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 2.2e-47 193.4 217 53.0
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 3.7e-47 192.6 194 57.2
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 8.2e-47 191.4 230 50.0
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.4e-46 190.7 213 51.6
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 4.1e-46 189.1 213 50.7
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 2.0e-45 186.8 206 51.5
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 2.9e-44 183.0 211 49.3
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 3.8e-44 182.6 187 55.6
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 6.1e-42 175.3 229 48.0
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 6.3e-39 165.2 183 52.5
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 5.3e-38 162.2 183 51.9
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 5.3e-38 162.2 188 51.1
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 7.0e-38 161.8 179 50.3
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 9.1e-38 161.4 186 53.8
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.6e-37 160.6 222 44.6
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 5.9e-37 158.7 222 44.6
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 7.7e-37 158.3 228 44.3
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 5.0e-36 155.6 176 52.3
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 2.6e-32 143.3 137 61.3
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 3.7e-31 139.4 88 85.2
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.0e-24 117.1 209 35.4
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.3e-23 114.4 230 37.8
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 7.0e-22 108.6 126 49.2
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.7e-15 86.3 171 38.6
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 2.3e-12 77.0 85 50.6
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 8.0e-10 68.6 64 54.7
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 2.3e-09 67.0 162 32.1
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 3.1e-09 66.6 199 29.1
AagrBONN_evm.TU.Sc2ySwM_228.3977 Anthoceros agrestis HOM05D024008 ORTHO05D000523 2.4e-06 57.0 115 31.3


User provided reference genes

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