Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009060g0010 Nicotiana tabacum HOM05D004734 ORTHO05D006019 0.0e+00 1439.9 763 100.0
Nitab4.5_0000006g0360 Nicotiana tabacum HOM05D004734 ORTHO05D006019 0.0e+00 1359.4 772 94.3
Solyc05g043350.4 Solanum lycopersicum HOM05D004734 ORTHO05D006019 0.0e+00 1251.1 763 85.8
CAN.G387.3 Capsicum annuum HOM05D004734 ORTHO05D006019 0.0e+00 1246.5 764 84.8
Dinv08709 Davidia involucrata HOM05D004734 ORTHO05D006019 1.2e-282 976.5 766 67.5
Sopen05g026560 Solanum pennellii HOM05D004734 ORTHO05D006019 4.3e-280 968.0 575 87.5
Hma1.2p1_2840F.1_g329320 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 7.3e-272 940.6 763 66.4
Cc00_g21460 Coffea canephora HOM05D004734 ORTHO05D006019 2.6e-269 932.2 763 64.6
CSS0018671 Camellia sinensis var. sinensis HOM05D004734 ORTHO05D006019 1.7e-268 929.5 765 64.7
PGSC0003DMG400019206 Solanum tuberosum HOM05D004734 ORTHO05D006019 1.0e-257 893.6 531 87.9
vmacro12148 Vaccinium macrocarpon HOM05D004734 ORTHO05D006019 1.3e-257 893.3 807 60.5
Migut.A01159 Erythranthe guttata HOM05D004734 ORTHO05D006019 2.5e-256 889.0 762 61.8
Actinidia09755 Actinidia chinensis HOM05D004734 ORTHO05D006019 9.5e-256 887.1 738 63.6
Atru.chr6.3288 Acer truncatum HOM05D004734 ORTHO05D006019 2.1e-255 885.9 763 61.3
TAR629G0221 Trochodendron aralioides HOM05D004734 ORTHO05D006019 2.4e-254 882.5 766 60.7
Ciclev10014379m.g Citrus clementina HOM05D004734 ORTHO05D006019 3.4e-253 878.6 762 59.8
Duzib138G1622 Durio zibethinus HOM05D004734 ORTHO05D006019 9.9e-253 877.1 779 58.9
SGA_v2.0_scaffold73G24401 Striga asiatica HOM05D004734 ORTHO05D006019 2.2e-252 875.9 783 60.0
Cfa014305 Carpinus fangiana HOM05D004734 ORTHO05D006019 6.4e-252 874.4 766 60.1
SalBow7G0507 Salvia bowleyana HOM05D004734 ORTHO05D006019 2.3e-249 865.9 762 60.1
Gohir.D07G174400 Gossypium hirsutum HOM05D004734 ORTHO05D006019 3.9e-249 865.1 763 58.5
DCAR_012916 Daucus carota HOM05D004734 ORTHO05D006019 5.6e-248 861.3 762 61.9
Potri.002G223600 Populus trichocarpa HOM05D004734 ORTHO05D006019 9.6e-248 860.5 763 58.5
Prupe.3G208500 Prunus persica HOM05D004734 ORTHO05D006019 1.6e-247 859.8 759 60.1
Glyma.02G266800 Glycine max HOM05D004734 ORTHO05D006019 2.8e-247 859.0 761 59.9
TWI75G1245 Tripterygium wilfordii HOM05D004734 ORTHO05D006019 1.8e-246 856.3 762 59.8
Manes.12G058300 Manihot esculenta HOM05D004734 ORTHO05D006019 5.3e-246 854.7 762 59.1
Nn1g07321 Nelumbo nucifera HOM05D004734 ORTHO05D006019 5.3e-246 854.7 761 59.4
CiPaw.04G108800 Carya illinoinensis HOM05D004734 ORTHO05D006019 3.4e-245 852.0 764 58.5
MD09G1116200 Malus domestica HOM05D004734 ORTHO05D006019 9.9e-245 850.5 760 59.3
Oeu054514.1 Olea europaea HOM05D004734 ORTHO05D006019 2.2e-244 849.4 766 62.3
FAN14G4409 Fragaria x ananassa HOM05D004734 ORTHO05D006019 4.9e-244 848.2 759 59.7
CANSAT64G0097 Cannabis sativa HOM05D004734 ORTHO05D006019 8.4e-244 847.4 765 59.2
HanXRQChr16g0508221 Helianthus annuus HOM05D004734 ORTHO05D006019 3.2e-243 845.5 767 60.8
RcHm_v2.0_Chr2g0157781 Rosa chinensis HOM05D004734 ORTHO05D006019 1.6e-242 843.2 759 59.9
Glyma.14G050700 Glycine max HOM05D004734 ORTHO05D006019 7.8e-242 840.9 761 58.6
FAN09G1456 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.0e-241 840.5 776 58.4
GSVIVG01030526001 Vitis vinifera HOM05D004734 ORTHO05D006019 1.7e-241 839.7 761 61.0
PGR042G3679 Punica granatum HOM05D004734 ORTHO05D006019 8.7e-241 837.4 765 58.7
Haze_12752 Corylus avellana HOM05D004734 ORTHO05D006019 1.1e-240 837.0 746 59.7
Phvul.008G215200 Phaseolus vulgaris HOM05D004734 ORTHO05D006019 4.3e-240 835.1 765 59.0
THA.LOC104826129 Tarenaya hassleriana HOM05D004734 ORTHO05D006019 5.6e-240 834.7 765 57.8
FAN02G4553 Fragaria x ananassa HOM05D004734 ORTHO05D006019 8.1e-239 830.9 759 58.8
MD17G1107900 Malus domestica HOM05D004734 ORTHO05D006019 8.1e-239 830.9 760 58.4
FAN05G4875 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.8e-238 829.7 771 58.1
Gorai.001G195000 Gossypium raimondii HOM05D004734 ORTHO05D006019 3.4e-237 825.5 763 56.6
AL4G28410 Arabidopsis lyrata HOM05D004734 ORTHO05D006019 9.9e-237 823.9 763 57.9
CARHR126840 Cardamine hirsuta HOM05D004734 ORTHO05D006019 1.3e-236 823.5 765 57.3
Eucgr.A01088 Eucalyptus grandis HOM05D004734 ORTHO05D006019 3.8e-236 822.0 766 56.5
Thhalv10016293m.g Eutrema salsugineum HOM05D004734 ORTHO05D006019 1.4e-235 820.1 765 57.5
Sed0026816 Sechium edule HOM05D004734 ORTHO05D006019 4.2e-235 818.5 762 56.7
BcaB01g03944 Brassica carinata HOM05D004734 ORTHO05D006019 3.5e-234 815.5 765 56.7
HanXRQChr14g0438421 Helianthus annuus HOM05D004734 ORTHO05D006019 3.5e-234 815.5 767 59.3
AT2G32900 Arabidopsis thaliana HOM05D004734 ORTHO05D006019 5.1e-233 811.6 762 56.4
Aqoxy2G03788 Aquilegia oxysepala HOM05D004734 ORTHO05D006019 8.7e-233 810.8 772 56.7
MELO3C019721.2 Cucumis melo HOM05D004734 ORTHO05D006019 1.1e-232 810.4 776 56.3
ClCG02G018160 Citrullus lanatus HOM05D004734 ORTHO05D006019 1.9e-232 809.7 761 56.2
Lalb_Chr10g0105531 Lupinus albus HOM05D004734 ORTHO05D006019 1.9e-232 809.7 765 56.6
Lsat_1_v5_gn_7_94920 Lactuca sativa HOM05D004734 ORTHO05D006019 1.6e-231 806.6 744 59.5
Atru.chr6.3273 Acer truncatum HOM05D004734 ORTHO05D006019 2.8e-231 805.8 714 60.1
BcaC01g05869 Brassica carinata HOM05D004734 ORTHO05D006019 2.8e-231 805.8 765 56.6
Sp4g15270 Schrenkiella parvula HOM05D004734 ORTHO05D006019 6.2e-231 804.7 765 57.0
Sc21g0001080 Simmondsia chinensis HOM05D004734 ORTHO05D006019 8.1e-231 804.3 766 57.0
Lj8A131T30 Lonicera japonica HOM05D004734 ORTHO05D006019 1.1e-230 803.9 738 62.5
Aa31LG5G4570 Aethionema arabicum HOM05D004734 ORTHO05D006019 9.0e-230 800.8 759 56.5
BraA03t11112Z Brassica rapa HOM05D004734 ORTHO05D006019 5.8e-229 798.1 787 55.1
arahy.Tifrunner.gnm1.ann1.L0FFGY Arachis hypogaea HOM05D004734 ORTHO05D006019 1.0e-228 797.3 767 56.3
Carub.0004s1431 Capsella rubella HOM05D004734 ORTHO05D006019 3.8e-228 795.4 761 55.8
BcaB02g10504 Brassica carinata HOM05D004734 ORTHO05D006019 8.4e-228 794.3 762 56.2
BolC3t14542H Brassica oleracea HOM05D004734 ORTHO05D006019 2.5e-227 792.7 788 54.9
QL01p037797 Quercus lobata HOM05D004734 ORTHO05D006019 1.2e-226 790.4 715 59.4
BraA05t20212Z Brassica rapa HOM05D004734 ORTHO05D006019 6.7e-225 784.6 780 55.1
VMungo0647G1710 Vigna mungo HOM05D004734 ORTHO05D006019 6.7e-225 784.6 737 57.5
BolC4t23215H Brassica oleracea HOM05D004734 ORTHO05D006019 1.5e-224 783.5 780 54.5
A05p12730 Brassica napus HOM05D004734 ORTHO05D006019 1.3e-223 780.4 771 55.1
arahy.Tifrunner.gnm1.ann1.LYY30L Arachis hypogaea HOM05D004734 ORTHO05D006019 8.2e-223 777.7 785 54.9
PSO017G2150 Papaver somniferum HOM05D004734 ORTHO05D006019 5.8e-221 771.5 766 53.7
C04p16650 Brassica napus HOM05D004734 ORTHO05D006019 2.3e-217 759.6 763 54.4
EL10Ac9g22816 Beta vulgaris HOM05D004734 ORTHO05D006019 6.9e-214 748.0 807 52.2
TPR.G25656 Trifolium pratense HOM05D004734 ORTHO05D006019 1.2e-213 747.3 689 57.6
A03p18530 Brassica napus HOM05D004734 ORTHO05D006019 1.3e-207 727.2 731 54.7
Thecc.01G184100 Theobroma cacao HOM05D004734 ORTHO05D006019 4.8e-207 725.3 574 65.2
C03p21580 Brassica napus HOM05D004734 ORTHO05D006019 5.3e-206 721.8 732 54.4
Gohir.A07G168100 Gossypium hirsutum HOM05D004734 ORTHO05D006019 9.4e-203 711.1 574 63.4
Duzib211G0196 Durio zibethinus HOM05D004734 ORTHO05D006019 1.2e-202 710.7 762 51.4
Rhsim06G0169400 Rhododendron simsii HOM05D004734 ORTHO05D006019 5.1e-201 705.3 756 54.5
AUR62017577 Chenopodium quinoa HOM05D004734 ORTHO05D006019 2.4e-198 696.4 765 50.7
CDE07G0136 Ceratophyllum demersum HOM05D004734 ORTHO05D006019 3.1e-198 696.0 764 50.4
Ah.01g001840 Amaranthus hybridus HOM05D004734 ORTHO05D006019 2.6e-197 693.0 766 50.5
Dinv39761 Davidia involucrata HOM05D004734 ORTHO05D006019 1.6e-194 683.7 516 70.2
Medtr5g084830 Medicago truncatula HOM05D004734 ORTHO05D006019 1.6e-194 683.7 569 63.1
HPP92_000196 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.6e-194 683.7 762 50.1
FvH4_6g41900 Fragaria vesca HOM05D004734 ORTHO05D006019 1.4e-193 680.6 566 63.6
ATR1128G058 Amborella trichopoda HOM05D004734 ORTHO05D006019 8.8e-193 677.9 747 51.8
Psat2g026760 Pisum sativum HOM05D004734 ORTHO05D006019 3.3e-192 676.0 569 63.1
ECA236G2537 Erigeron canadensis HOM05D004734 ORTHO05D006019 1.1e-190 671.0 640 57.0
MBI16_g26176_MAGBIO Magnolia biondii HOM05D004734 ORTHO05D006019 6.5e-188 661.8 762 50.1
LjContig00029g0002265 Lotus japonicus HOM05D004734 ORTHO05D006019 2.7e-186 656.4 569 61.7
CsaV3_6G015550 Cucumis sativus L. HOM05D004734 ORTHO05D006019 2.8e-183 646.4 570 60.4
PSO675G0915 Papaver somniferum HOM05D004734 ORTHO05D006019 8.3e-183 644.8 656 52.4
Hma1.2p1_0445F.1_g154190 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 3.5e-181 639.4 457 72.6
Cpa.g.sc132.37 Carica papaya HOM05D004734 ORTHO05D006019 8.5e-180 634.8 711 50.5
AUR62015114 Chenopodium quinoa HOM05D004734 ORTHO05D006019 2.6e-176 623.2 764 48.2
Hma1.2p1_2840F.1_g329330 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 3.1e-174 616.3 526 64.4
Peaxi162Scf00977g00315 Petunia axillaris HOM05D004734 ORTHO05D006019 6.6e-172 608.6 478 73.0
TPR.G6822 Trifolium pratense HOM05D004734 ORTHO05D006019 9.8e-168 594.7 582 54.1
Hund08442 Selenicereus undatus HOM05D004734 ORTHO05D006019 1.2e-162 577.8 767 45.2
SEGI_13952 Sequoiadendron giganteum HOM05D004734 ORTHO05D006019 1.2e-152 544.7 766 40.2
Zm00001eb114880 Zea mays HOM05D004734 ORTHO05D006019 5.4e-150 535.8 639 46.5
HPP92_000240 Vanilla planifolia HOM05D004734 ORTHO05D006019 7.3e-147 525.4 525 54.5
Peaxi162Scf00977g00312 Petunia axillaris HOM05D004734 ORTHO05D006019 1.1e-145 521.5 291 92.1
Sabra02G0171200 Salix brachista HOM05D004734 ORTHO05D006019 4.9e-135 486.1 506 51.4
SHI10094 Sapria himalayana HOM05D004734 ORTHO05D006019 1.3e-114 418.3 438 51.6
Psat1g135920 Pisum sativum HOM05D004734 ORTHO05D006019 2.8e-114 417.2 333 65.8
unitig_8.g4607 Utricularia gibba HOM05D004734 ORTHO05D006019 4.6e-109 399.8 388 57.0
Ca_06067_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 2.1e-106 391.0 485 46.2
Psat0s1468g0040 Pisum sativum HOM05D004734 ORTHO05D006019 5.3e-105 386.3 326 63.5
Mapoly0004s0108 Marchantia polymorpha HOM05D004734 ORTHO05D006019 6.5e-103 379.4 815 30.9
COL.COLO4_07254 Corchorus olitorius HOM05D004734 ORTHO05D006019 9.3e-102 375.6 563 42.5
Psat0s1468g0080 Pisum sativum HOM05D004734 ORTHO05D006019 6.9e-97 359.4 284 66.5
Os11g0545700 Oryza sativa ssp. japonica HOM05D004734 ORTHO05D006019 2.0e-91 341.3 284 62.3
SMO200G0072 Selaginella moellendorffii HOM05D004734 ORTHO05D006019 3.2e-86 323.9 742 30.6
Ca_06064_v3 Cicer arietinum L. HOM05D004734 ORTHO05D000733 2.0e-83 314.7 284 60.9
Psat5g176200 Pisum sativum HOM05D004734 ORTHO05D006019 5.9e-80 303.1 230 69.1
Pp3c3_5560 Physcomitrium patens HOM05D004734 ORTHO05D006019 2.2e-79 301.2 765 28.4
unitig_8.g4608 Utricularia gibba HOM05D004734 ORTHO05D006019 1.2e-77 295.4 345 47.0
RcHm_v2.0_Chr1g0340131 Rosa chinensis HOM05D004734 ORTHO05D006019 4.1e-65 253.8 177 71.8
Zm00001eb113720 Zea mays HOM05D004734 ORTHO05D006019 2.7e-61 241.1 222 57.2
CBR_g30206 Chara braunii HOM05D004734 ORTHO05D006019 1.6e-56 225.3 628 28.0
RcHm_v2.0_Chr1g0340141 Rosa chinensis HOM05D004734 ORTHO05D006019 1.5e-51 208.8 218 50.5
TPR.G146 Trifolium pratense HOM05D004734 ORTHO05D006019 8.3e-42 176.4 137 65.0
HPP92_028626 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.4e-41 175.6 430 31.6
HPP92_028624 Vanilla planifolia HOM05D004734 ORTHO05D006019 7.0e-41 173.3 416 31.7
Atru.chr12.2374 Acer truncatum HOM05D004734 ORTHO05D006019 9.5e-38 162.9 191 43.5
RcHm_v2.0_Chr0c20g0500271 Rosa chinensis HOM05D004734 ORTHO05D006019 8.3e-34 149.8 247 42.1
SHI10095 Sapria himalayana HOM05D004734 ORTHO05D006019 2.1e-32 145.2 243 38.3
RcHm_v2.0_Chr1g0340121 Rosa chinensis HOM05D004734 ORTHO05D006019 2.8e-29 134.8 108 67.6
Medtr5g084823 Medicago truncatula HOM05D004734 ORTHO05D006019 3.1e-28 131.3 192 37.0
Ca_31316_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 3.8e-26 124.4 100 65.0
Ca_06065_v3 Cicer arietinum L. HOM05D004734 ORTHO05D001394 4.1e-25 120.9 85 70.6
Psat1g136480 Pisum sativum HOM05D002598 ORTHO05D014892 3.3e-22 111.3 85 64.7
SMO278G0012 Selaginella moellendorffii HOM05D004734 ORTHO05D006019 7.3e-22 110.2 293 28.3
Nitab4.5_0001356g0190 Nicotiana tabacum HOM05D000224 ORTHO05D001489 8.1e-21 106.7 124 47.6
HPP92_000155 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.2e-16 92.8 216 31.5
HPP92_028625 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.7e-15 89.0 68 64.7
HPP92_028623 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.4e-12 79.3 149 38.9
CBR_g3444 Chara braunii HOM05D000019 ORTHO05D000353 6.4e-10 70.5 100 33.0
Cfa026774 Carpinus fangiana HOM05D004734 ORTHO05D126311 9.3e-09 66.6 182 26.9
FvH4_1g12421 Fragaria vesca HOM05D058264 ORTHO05D029456 2.1e-08 65.5 202 29.7
MCO12G150 Micromonas commoda HOM05D004734 ORTHO05D006019 4.6e-08 64.3 317 26.2
PRCOL_00004220 Prasinoderma coloniale HOM05D004734 ORTHO05D006019 6.0e-08 63.9 457 22.1


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