Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 0.0e+00 1082.0 526 100.0
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 9.4e-303 1042.7 524 96.8
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 3.5e-257 891.3 531 82.7
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 6.4e-235 817.4 517 78.9
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 8.4e-235 817.0 542 76.4
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 7.9e-217 757.3 485 78.1
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 2.2e-195 686.0 527 63.8
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 8.8e-192 674.1 531 62.5
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 2.8e-190 669.1 528 63.6
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 5.0e-187 658.3 529 62.8
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.5e-186 656.0 529 61.1
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 7.9e-185 651.0 527 62.2
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.0e-184 650.6 478 70.3
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 5.1e-184 648.3 529 61.8
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 8.8e-184 647.5 484 65.9
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 8.8e-184 647.5 530 62.3
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 8.8e-184 647.5 530 62.3
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 5.3e-181 638.3 526 61.2
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 5.3e-181 638.3 526 60.3
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 9.1e-181 637.5 532 60.9
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 1.5e-180 636.7 527 60.3
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 2.0e-180 636.3 526 60.8
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 5.0e-179 631.7 530 59.6
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 8.5e-179 630.9 531 59.5
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 1.5e-178 630.2 529 60.1
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 1.5e-178 630.2 514 60.3
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 1.5e-178 630.2 524 60.1
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 1.9e-178 629.8 518 60.4
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 1.9e-178 629.8 532 59.6
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 1.9e-178 629.8 527 59.6
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 3.2e-178 629.0 527 58.8
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 3.2e-178 629.0 529 60.5
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 3.2e-178 629.0 524 59.7
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 4.2e-178 628.6 531 58.9
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 5.5e-178 628.2 512 61.9
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 7.2e-178 627.9 524 59.5
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 9.4e-178 627.5 522 60.5
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 1.2e-177 627.1 532 60.0
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 1.2e-177 627.1 531 59.3
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 1.6e-177 626.7 484 64.0
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 2.7e-177 625.9 525 58.3
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 3.6e-177 625.5 532 59.2
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 3.0e-176 622.5 531 58.4
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 4.0e-176 622.1 533 60.0
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 4.0e-176 622.1 528 59.1
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 4.0e-176 622.1 530 59.8
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 5.2e-176 621.7 419 75.4
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 1.5e-175 620.2 536 58.0
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.5e-175 620.2 528 60.2
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 4.4e-175 618.6 535 59.8
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 2.2e-174 616.3 524 59.0
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 2.2e-174 616.3 528 59.8
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 2.2e-174 616.3 520 58.8
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 2.8e-174 615.9 538 57.8
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 2.8e-174 615.9 524 59.4
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 6.3e-174 614.8 530 57.7
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 1.4e-173 613.6 526 58.6
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 2.4e-173 612.8 528 59.5
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 3.1e-173 612.5 526 58.7
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 4.1e-173 612.1 543 56.9
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 2.0e-172 609.8 531 58.4
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 2.9e-171 605.9 564 56.0
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 3.8e-171 605.5 563 55.2
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 1.1e-170 604.0 558 56.1
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 1.9e-170 603.2 556 57.2
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 5.5e-170 601.7 487 61.2
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 5.5e-170 601.7 611 51.6
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 2.7e-169 599.4 567 54.9
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 6.1e-169 598.2 525 57.1
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 6.8e-168 594.7 522 58.6
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.7e-166 589.0 491 58.9
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 3.1e-165 585.9 507 56.0
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 2.2e-163 579.7 534 55.8
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 2.5e-162 576.2 484 58.5
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 4.0e-160 568.9 526 54.6
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 3.4e-159 565.8 525 55.2
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.3e-158 563.9 524 55.9
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 1.3e-158 563.9 524 54.4
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 2.2e-158 563.1 515 55.9
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 8.3e-158 561.2 523 55.3
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 1.1e-157 560.8 521 54.3
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 1.8e-157 560.1 533 54.6
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 5.4e-157 558.5 527 54.5
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 9.1e-157 557.8 526 54.0
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 1.6e-156 557.0 522 54.4
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 2.7e-156 556.2 523 53.9
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 2.7e-156 556.2 521 54.7
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 2.9e-155 552.7 395 69.1
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 5.0e-155 552.0 528 53.2
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.5e-154 550.4 474 57.8
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 5.6e-154 548.5 527 53.1
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 7.2e-154 548.1 448 60.9
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 3.0e-152 542.7 481 55.9
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 5.2e-152 542.0 481 55.5
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 5.2e-152 542.0 526 52.9
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.2e-151 540.8 528 52.5
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.2e-151 540.8 576 51.0
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 4.9e-150 535.4 485 55.3
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 2.0e-148 530.0 475 57.1
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 2.9e-147 526.2 695 44.6
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 8.0e-145 518.1 394 62.7
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 4.0e-144 515.8 572 50.5
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.1e-141 507.7 425 60.2
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 2.5e-138 496.5 473 53.7
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 1.3e-134 484.2 374 63.4
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 4.1e-133 479.2 365 62.7
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 7.3e-122 441.8 403 57.1
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 4.7e-121 439.1 514 46.3
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 1.4e-117 427.6 536 45.1
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 5.8e-111 405.6 388 55.2
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 5.1e-107 392.5 421 51.8
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 8.7e-99 365.2 254 69.7
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.1e-90 338.2 315 55.6
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 1.5e-87 327.8 254 59.4
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 5.9e-87 325.9 349 51.6
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 2.2e-86 323.9 255 63.1
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 1.4e-85 321.2 255 62.7
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 7.9e-84 315.5 255 59.2
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 1.3e-83 314.7 297 54.2
Zm00001eb294000 Zea mays HOM05D000219 ORTHO05D004649 4.8e-81 306.2 359 45.1
ATR0322G032 Amborella trichopoda HOM05D000219 ORTHO05D004649 6.3e-81 305.8 252 60.3
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 5.9e-79 299.3 238 60.9
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 1.0e-78 298.5 212 63.7
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 1.7e-78 297.7 299 49.5
Mapoly0167s0023 Marchantia polymorpha HOM05D000219 ORTHO05D004649 2.1e-76 290.8 251 57.4
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 2.7e-76 290.4 249 56.2
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 1.4e-75 288.1 222 62.6
AagrBONN_evm.TU.Sc2ySwM_117.2004 Anthoceros agrestis HOM05D000219 ORTHO05D004649 3.0e-75 287.0 237 58.6
PGSC0003DMG402004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 4.1e-72 276.6 153 85.6
CDE06G2407 Ceratophyllum demersum HOM05D000219 ORTHO05D004649 1.9e-69 267.7 225 59.6
Pp3c1_10760 Physcomitrium patens HOM05D000219 ORTHO05D004649 1.9e-69 267.7 251 53.8
CBR_g11164 Chara braunii HOM05D000219 ORTHO05D004649 2.5e-69 267.3 211 59.2
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.0e-66 257.7 248 50.8
Cre13.g581550 Chlamydomonas reinhardtii HOM05D000219 ORTHO05D004649 1.3e-65 255.0 252 50.0
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 8.2e-65 252.3 167 73.1
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 1.4e-64 251.5 264 50.8
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 4.1e-64 250.0 268 50.0
PRCOL_00002092 Prasinoderma coloniale HOM05D000219 ORTHO05D004649 2.3e-59 234.2 251 48.6
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 3.3e-58 230.3 142 73.9
SMO146G0027 Selaginella moellendorffii HOM05D000219 ORTHO05D004649 4.4e-58 229.9 245 46.9
SHI31711 Sapria himalayana HOM05D000219 ORTHO05D004649 3.1e-56 223.8 168 60.1
HanXRQChr10g0318971 Helianthus annuus HOM05D000219 ORTHO05D004649 1.5e-53 214.9 169 62.7
Cfa023086 Carpinus fangiana HOM05D000219 ORTHO05D004649 4.7e-52 209.9 258 43.4
HPP92_021534 Vanilla planifolia HOM05D000219 ORTHO05D004649 6.8e-51 206.1 177 57.1
HPP92_021538 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.5e-45 188.3 223 46.2
PGSC0003DMG401004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 5.5e-45 186.4 144 68.1
vmacro14894 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 7.2e-45 186.0 279 42.7
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 1.0e-38 165.6 220 41.4
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 1.4e-35 155.2 211 44.1
PGSC0003DMG400016550 Solanum tuberosum HOM05D000219 ORTHO05D004649 7.5e-34 149.4 77 92.2
CARHR125230 Cardamine hirsuta HOM05D000219 ORTHO05D004649 6.4e-33 146.4 110 60.0
Haze_26924 Corylus avellana HOM05D000219 ORTHO05D004649 1.1e-32 145.6 161 44.1
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 1.6e-31 141.7 96 71.9
CAN.G555.5 Capsicum annuum HOM05D000219 ORTHO05D000137 2.0e-31 141.4 73 86.3
AagrBONN_evm.TU.Sc2ySwM_344.3315 Anthoceros agrestis HOM05D000219 ORTHO05D004649 3.0e-30 137.5 129 51.9
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 8.6e-30 136.0 94 71.3
Nitab4.5_0005102g0050 Nicotiana tabacum HOM05D000219 ORTHO05D004649 1.5e-29 135.2 80 83.8
HanXRQChr10g0318981 Helianthus annuus HOM05D000219 ORTHO05D004649 2.1e-28 131.3 121 52.9
Cpa.g.c44268 Carica papaya HOM05D000219 ORTHO05D004649 8.0e-28 129.4 70 77.1
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 1.0e-27 129.0 94 63.8
vmacro13881 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.4e-24 118.6 106 55.7
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 4.1e-24 117.1 112 48.2
vmacro20266 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 8.6e-22 109.4 212 33.5
PGSC0003DMG401026834 Solanum tuberosum HOM05D000219 ORTHO05D049347 1.1e-21 109.0 60 85.0
AL4G27720 Arabidopsis lyrata HOM05D000219 ORTHO05D021059 1.6e-20 105.1 95 55.8
HanXRQChr10g0318991 Helianthus annuus HOM05D000219 ORTHO05D021059 1.6e-20 105.1 66 72.7
Nitab4.5_0005102g0040 Nicotiana tabacum HOM05D000219 ORTHO05D049347 1.1e-19 102.4 52 90.4
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 4.4e-18 97.1 111 44.1
PGSC0003DMG400020961 Solanum tuberosum HOM05D000219 ORTHO05D004649 7.5e-18 96.3 80 60.0
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 6.4e-17 93.2 66 63.6
Lj7A96T47 Lonicera japonica HOM05D000219 ORTHO05D004649 4.1e-16 90.5 52 71.2
CARHR125240 Cardamine hirsuta HOM05D000219 ORTHO05D004649 5.4e-16 90.1 102 49.0
Nitab4.5_0005102g0060 Nicotiana tabacum HOM05D000219 ORTHO05D004649 3.5e-15 87.4 43 93.0
Actinidia05378 Actinidia chinensis HOM05D000219 ORTHO05D004649 4.6e-15 87.0 59 64.4
PGSC0003DMG400020960 Solanum tuberosum HOM05D000219 ORTHO05D004649 4.6e-15 87.0 43 93.0
Atru.chr10.1695 Acer truncatum HOM05D000219 ORTHO05D021059 6.0e-15 86.7 82 56.1
CARHR125220 Cardamine hirsuta HOM05D000219 ORTHO05D021059 1.1e-13 82.4 70 58.6
Gohir.A03G040550 Gossypium hirsutum HOM05D000219 ORTHO05D021059 1.7e-09 68.6 52 67.3
Lj7A96T46 Lonicera japonica HOM05D000219 ORTHO05D004649 1.3e-06 58.9 42 59.5
A02p19800 Brassica napus HOM05D000219 ORTHO05D017689 8.6e-06 56.2 73 41.1


User provided reference genes

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