Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000036g0410 Nicotiana tabacum HOM05D007867 ORTHO05D009953 1.8e-12 75.5 68 100.0
Nitab4.5_0009046g0010 Nicotiana tabacum HOM05D007867 ORTHO05D009953 1.8e-12 75.5 68 100.0
PGSC0003DMG400010405 Solanum tuberosum HOM05D007867 ORTHO05D009953 1.1e-09 66.2 70 94.3
Solyc02g063440.3 Solanum lycopersicum HOM05D007867 ORTHO05D009953 2.4e-09 65.1 70 92.9
Cc07_g07830 Coffea canephora HOM05D007867 ORTHO05D009953 7.0e-09 63.5 68 80.9
Lalb_Chr09g0325761 Lupinus albus HOM05D007867 ORTHO05D009953 1.2e-08 62.8 65 69.2
Medtr5g030870 Medicago truncatula HOM05D007867 ORTHO05D009953 2.0e-08 62.0 64 85.9
CiPaw.08G145800 Carya illinoinensis HOM05D007867 ORTHO05D009953 2.7e-08 61.6 64 65.6
Migut.B00519 Erythranthe guttata HOM05D007867 ORTHO05D009953 3.5e-08 61.2 45 97.8
Ciclev10027423m.g Citrus clementina HOM05D007867 ORTHO05D009953 4.5e-08 60.8 62 93.5
Cc02_g20570 Coffea canephora HOM05D007867 ORTHO05D009953 5.9e-08 60.5 68 70.6
Gohir.D03G034400 Gossypium hirsutum HOM05D007867 ORTHO05D009953 2.3e-07 58.5 62 83.9
Gorai.003G036100 Gossypium raimondii HOM05D007867 ORTHO05D009953 2.3e-07 58.5 62 83.9
Hma1.2p1_0908F.1_g235690 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 2.3e-07 58.5 66 89.4
ATR0800G156 Amborella trichopoda HOM05D007867 ORTHO05D009953 2.9e-07 58.2 62 67.7
Cpa.g.c33237.1 Carica papaya HOM05D007867 ORTHO05D009953 2.9e-07 58.2 62 96.8
Manes.13G104200 Manihot esculenta HOM05D007867 ORTHO05D009953 2.9e-07 58.2 62 82.3
Nn1g05680 Nelumbo nucifera HOM05D007867 ORTHO05D009953 2.9e-07 58.2 62 67.7
Nn5g29770 Nelumbo nucifera HOM05D007867 ORTHO05D009953 2.9e-07 58.2 62 82.3
Thecc.01G083600 Theobroma cacao HOM05D007867 ORTHO05D009953 2.9e-07 58.2 62 66.1
GSVIVG01006775001 Vitis vinifera HOM05D007867 ORTHO05D009953 2.9e-07 58.2 62 82.3
CiPaw.07G042200 Carya illinoinensis HOM05D007867 ORTHO05D009953 5.0e-07 57.4 61 83.6
Peaxi162Scf00943g00415 Petunia axillaris HOM05D007867 ORTHO05D009953 8.6e-07 56.6 43 88.4
RcHm_v2.0_Chr2g0109971 Rosa chinensis HOM05D007867 ORTHO05D009953 8.6e-07 56.6 64 64.1
Haze_03934 Corylus avellana HOM05D007867 ORTHO05D009953 1.1e-06 56.2 62 90.3
Gohir.A02G146200 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.1e-06 56.2 62 96.8
CiPaw.05G026800 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.5e-06 55.8 67 64.2
Glyma.09G202700 Glycine max HOM05D007867 ORTHO05D009953 1.5e-06 55.8 63 85.7
Actinidia36378 Actinidia chinensis HOM05D007867 ORTHO05D009953 1.9e-06 55.5 63 47.6
Gohir.A11G209001 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.9e-06 55.5 62 67.7
Hma1.2p1_1119F.1_g259180 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 1.9e-06 55.5 41 85.4
Potri.015G025700 Populus trichocarpa HOM05D007867 ORTHO05D009953 1.9e-06 55.5 62 88.7
DCAR_021457 Daucus carota HOM05D000419 ORTHO05D000692 2.5e-06 55.1 44 65.9
Sopen02g014530 Solanum pennellii HOM05D007867 ORTHO05D009953 5.5e-06 53.9 70 87.1
Gorai.007G230100 Gossypium raimondii HOM05D007867 ORTHO05D009953 9.5e-06 53.1 62 87.1
Sed0014306 Sechium edule HOM05D007867 ORTHO05D009953 9.5e-06 53.1 67 62.7


User provided reference genes

Program Settings