Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 9.4e-104 380.2 190 100.0
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.7e-92 342.8 190 90.0
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 1.3e-89 333.2 180 90.0
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 1.1e-88 330.1 180 88.9
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 2.0e-85 319.3 214 77.1
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 9.5e-80 300.4 186 77.4
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 8.1e-79 297.4 188 78.7
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 2.9e-76 288.9 189 74.1
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.4e-75 286.6 187 74.9
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 2.7e-74 282.3 189 75.1
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 6.0e-74 281.2 189 76.2
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.0e-73 280.4 185 71.4
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 3.9e-73 278.5 189 72.0
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 5.1e-73 278.1 193 72.0
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 5.1e-73 278.1 182 74.2
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.1e-72 276.9 183 73.2
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 1.5e-72 276.6 185 73.5
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 2.5e-72 275.8 180 75.6
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 3.3e-72 275.4 175 77.7
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 7.3e-72 274.2 187 71.1
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.2e-71 273.5 180 74.4
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.6e-71 273.1 189 69.8
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 4.7e-71 271.6 170 77.1
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.4e-70 270.0 174 75.9
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 1.8e-70 269.6 174 76.4
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.0e-70 268.5 175 76.6
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.2e-69 266.9 185 70.8
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.6e-69 265.8 183 71.6
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 4.4e-69 265.0 177 75.7
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 9.9e-69 263.8 182 70.3
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.3e-68 263.5 182 70.3
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.3e-68 263.5 201 68.7
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 2.2e-68 262.7 188 68.6
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 2.2e-68 262.7 189 70.4
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 3.7e-68 261.9 174 71.3
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 4.9e-68 261.5 202 67.8
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 6.4e-68 261.2 190 68.9
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 8.4e-68 260.8 182 72.5
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.9e-67 259.6 184 70.7
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 2.4e-67 259.2 182 69.8
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 2.4e-67 259.2 194 67.5
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 4.1e-67 258.5 206 71.8
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 7.1e-67 257.7 174 71.3
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 9.2e-67 257.3 189 68.3
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 1.2e-66 256.9 182 70.3
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.6e-66 256.5 190 69.5
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 7.8e-66 254.2 200 67.0
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 1.0e-65 253.8 174 71.8
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.7e-65 253.1 174 73.0
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 2.3e-65 252.7 200 66.5
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 5.1e-65 251.5 178 69.1
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 2.5e-64 249.2 169 69.8
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 2.5e-64 249.2 172 69.2
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 7.3e-64 247.7 168 70.2
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 9.6e-64 247.3 139 80.6
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.2e-63 246.9 178 69.7
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 3.6e-63 245.4 157 75.2
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 3.6e-63 245.4 181 68.0
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 4.7e-63 245.0 191 64.9
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.4e-62 243.4 144 79.2
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.8e-62 243.0 168 71.4
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 1.8e-62 243.0 168 71.4
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.8e-62 243.0 168 71.4
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.8e-62 243.0 168 71.4
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 2.4e-62 242.7 169 71.0
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 3.1e-62 242.3 168 70.8
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 3.1e-62 242.3 168 69.6
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 5.2e-62 241.5 168 70.2
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 5.2e-62 241.5 168 68.5
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 6.8e-62 241.1 193 64.2
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 6.8e-62 241.1 178 66.9
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 2.0e-61 239.6 161 73.3
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 4.4e-61 238.4 138 79.7
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 7.6e-61 237.7 168 69.6
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 7.6e-61 237.7 162 72.2
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 7.6e-61 237.7 169 66.9
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 2.2e-60 236.1 181 66.9
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 3.8e-60 235.3 183 63.4
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 3.8e-60 235.3 208 59.1
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 8.4e-60 234.2 137 81.8
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.7e-58 229.2 211 58.8
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.0e-57 227.3 169 65.1
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.0e-57 227.3 169 65.1
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.0e-57 227.3 176 63.6
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.7e-57 226.5 210 60.0
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.3e-57 226.1 161 66.5
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 2.5e-56 222.6 182 61.0
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.4e-54 216.9 192 61.5
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.4e-54 216.1 184 59.8
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 6.9e-54 214.5 172 65.7
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 7.6e-53 211.1 135 69.6
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 3.0e-49 199.1 151 66.9
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.4e-46 189.5 113 73.5
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 4.0e-46 188.7 180 55.0
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.0e-45 186.4 181 55.2
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 5.5e-43 178.3 145 62.1
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 9.6e-40 167.5 192 53.1
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 4.8e-39 165.2 162 51.9
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 3.4e-37 159.1 145 53.8
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 2.3e-33 146.4 85 76.5
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 7.4e-32 141.4 150 49.3
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.0e-28 131.0 66 84.8
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 4.3e-24 115.5 81 65.4
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 1.3e-23 114.0 104 64.4
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.9e-19 100.1 123 50.4
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 7.2e-19 98.2 67 67.2
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.6e-18 95.9 90 62.2
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 6.1e-18 95.1 54 81.5
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 1.7e-15 87.0 62 66.1
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.1e-14 84.3 93 53.8
Peaxi162Scf00166g00037 Petunia axillaris HOM05D007258 ORTHO05D008852 1.0e-09 67.8 41 85.4
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.4e-09 67.4 39 71.8
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 2.4e-06 56.6 94 34.0


User provided reference genes

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