Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.5e-110 401.7 220 100.0
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 8.7e-77 290.8 224 77.7
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 9.3e-71 270.8 230 73.9
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 3.0e-69 265.8 222 72.5
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 3.1e-66 255.8 222 66.7
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 5.3e-66 255.0 222 68.0
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 9.0e-66 254.2 222 70.3
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 6.1e-62 241.5 224 60.7
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 2.2e-59 233.0 222 64.9
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.0e-56 224.2 232 65.1
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.1e-55 220.7 169 71.0
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 9.4e-55 217.6 232 64.7
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 9.4e-55 217.6 216 57.4
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 6.1e-54 214.9 166 69.3
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 6.1e-54 214.9 222 58.6
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 7.9e-54 214.5 224 56.2
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.0e-53 214.2 221 58.4
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.0e-53 214.2 167 69.5
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 3.0e-53 212.6 181 66.3
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.1e-52 210.7 231 56.7
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.1e-52 210.7 231 56.7
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 2.0e-52 209.9 218 58.3
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 3.3e-52 209.1 224 55.4
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 5.7e-52 208.4 170 67.1
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 9.7e-52 207.6 168 67.3
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 9.7e-52 207.6 219 60.7
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 9.7e-52 207.6 167 67.1
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.2e-51 206.5 170 66.5
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 2.2e-51 206.5 225 55.1
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 3.7e-51 205.7 222 58.6
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 4.8e-51 205.3 241 53.9
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 6.3e-51 204.9 229 59.4
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 8.2e-51 204.5 240 58.3
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 1.1e-50 204.1 234 56.0
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 2.4e-50 203.0 218 57.3
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 3.1e-50 202.6 221 58.4
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 3.1e-50 202.6 176 63.6
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 1.6e-49 200.3 187 61.0
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 3.5e-49 199.1 220 54.1
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 4.5e-49 198.7 153 69.3
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 4.5e-49 198.7 176 61.4
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 5.9e-49 198.4 226 54.9
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 7.7e-49 198.0 172 67.4
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 1.0e-48 197.6 220 58.6
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.0e-48 197.6 228 50.9
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.3e-48 197.2 153 70.6
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.3e-48 197.2 153 70.6
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.3e-48 197.2 173 65.3
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.3e-48 197.2 179 68.2
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.7e-48 196.8 154 71.4
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.7e-48 196.8 154 71.4
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.7e-48 196.8 167 67.1
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.2e-48 196.4 171 66.7
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 5.0e-48 195.3 153 69.9
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 6.5e-48 194.9 153 78.4
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 1.1e-47 194.1 159 67.3
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 1.1e-47 194.1 232 57.8
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 1.9e-47 193.4 117 82.9
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.9e-47 193.4 174 58.6
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 1.9e-47 193.4 174 60.9
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 1.9e-47 193.4 144 81.2
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 2.5e-47 193.0 179 62.6
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 2.5e-47 193.0 174 59.2
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 4.2e-47 192.2 219 57.1
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 5.5e-47 191.8 170 62.4
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 1.2e-46 190.7 133 72.9
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.6e-46 190.3 157 70.1
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.1e-46 189.9 181 62.4
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.1e-46 189.9 181 66.3
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 2.7e-46 189.5 217 57.1
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 6.1e-46 188.3 164 65.2
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 6.1e-46 188.3 168 67.9
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 6.1e-46 188.3 176 59.7
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.0e-45 187.6 111 79.3
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.8e-45 186.8 218 55.5
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 2.3e-45 186.4 155 76.1
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 2.3e-45 186.4 214 58.9
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.0e-45 186.0 170 68.8
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 4.0e-45 185.7 173 68.2
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 4.0e-45 185.7 178 64.6
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 5.2e-45 185.3 157 65.6
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.5e-44 183.7 148 72.3
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 2.0e-44 183.3 220 58.6
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.0e-44 183.3 169 59.8
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 2.6e-44 183.0 117 79.5
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.6e-44 183.0 156 64.1
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 4.4e-44 182.2 178 62.4
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 5.7e-44 181.8 118 78.8
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 7.5e-44 181.4 177 58.2
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 7.5e-44 181.4 169 68.6
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.3e-43 180.6 200 58.5
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 4.8e-43 178.7 218 57.8
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.8e-42 176.8 181 63.5
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 4.1e-42 175.6 106 82.1
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 5.3e-42 175.3 191 53.4
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.6e-41 173.7 169 60.4
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 3.5e-41 172.6 168 56.5
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 5.9e-41 171.8 203 57.6
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.0e-40 171.0 145 67.6
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 2.2e-40 169.9 106 82.1
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 5.7e-36 155.2 189 45.5
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 6.3e-35 151.8 87 81.6
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 8.3e-35 151.4 187 53.5
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.1e-34 151.0 232 44.0
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 5.4e-34 148.7 106 66.0
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 7.0e-34 148.3 118 67.8
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 2.5e-31 139.8 148 55.4
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 8.3e-27 124.8 112 52.7
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 1.1e-26 124.4 101 57.4
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 3.1e-26 122.9 108 56.5
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 3.8e-24 115.9 110 53.6
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 3.3e-23 112.8 121 53.7
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 6.4e-19 98.6 60 76.7
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 2.5e-15 86.7 72 59.7
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 6.8e-13 78.6 160 41.2
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 1.2e-12 77.8 96 60.4
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 1.0e-08 64.7 79 48.1
Hund02819 Selenicereus undatus HOM05D000190 ORTHO05D000113 4.3e-07 59.3 43 67.4
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 4.7e-06 55.8 39 69.2


User provided reference genes

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