Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009023g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.2e-123 446.4 219 100.0
Nitab4.5_0000381g0090 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.1e-46 189.9 289 45.0
Nitab4.5_0002097g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 6.1e-46 188.3 324 42.6
Nitab4.5_0001401g0010 Nicotiana tabacum HOM05D000301 ORTHO05D010895 7.9e-46 188.0 289 45.0
Nitab4.5_0003726g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 9.1e-42 174.5 289 42.9
PGSC0003DMG400025824 Solanum tuberosum HOM05D000301 ORTHO05D010895 1.1e-39 167.5 303 40.9
Sopen01g050860 Solanum pennellii HOM05D000301 ORTHO05D010895 7.2e-39 164.9 286 41.6
Solyc01g108640.1 Solanum lycopersicum HOM05D000301 ORTHO05D010895 2.1e-38 163.3 299 40.1
Peaxi162Scf00016g00157 Petunia axillaris HOM05D000301 ORTHO05D010895 6.3e-35 151.8 221 47.5
Nitab4.5_0005606g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.9e-32 142.9 232 44.4
Peaxi162Scf00564g00057 Petunia axillaris HOM05D000301 ORTHO05D010895 2.1e-30 136.7 250 41.2
Nitab4.5_0001907g0060 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.0e-29 134.4 310 35.5
Peaxi162Scf00104g00052 Petunia axillaris HOM05D000301 ORTHO05D010895 1.5e-28 130.6 278 37.8
Nitab4.5_0005606g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 3.3e-28 129.4 289 35.3
Nitab4.5_0013616g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.8e-27 126.3 107 63.6
Nitab4.5_0004940g0070 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.8e-26 123.6 293 33.8
Nitab4.5_0002251g0090 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.9e-24 116.3 273 35.5
Nitab4.5_0001401g0060 Nicotiana tabacum HOM05D000301 ORTHO05D010895 7.5e-20 101.7 115 56.5
CAN.G322.39 Capsicum annuum HOM05D000301 ORTHO05D010895 1.7e-19 100.5 198 36.4
Nitab4.5_0003726g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.7e-19 100.5 193 38.9
Peaxi162Scf00104g00071 Petunia axillaris HOM05D000301 ORTHO05D010895 1.4e-18 97.4 234 34.6
Peaxi162Scf00751g00066 Petunia axillaris HOM05D000301 ORTHO05D010895 1.3e-16 90.9 190 35.8
Peaxi162Scf01077g00001 Petunia axillaris HOM05D000301 ORTHO05D010895 1.3e-16 90.9 190 35.8
Peaxi162Scf01028g00001 Petunia axillaris HOM05D000301 ORTHO05D010895 1.7e-16 90.5 190 35.8
Peaxi162Scf01028g00002 Petunia axillaris HOM05D000301 ORTHO05D010895 1.7e-16 90.5 190 35.8
Rhsim05G0087500 Rhododendron simsii HOM05D000301 ORTHO05D010895 3.2e-15 86.3 143 41.3
Hma1.2p1_0885F.1_g232640 Hydrangea macrophylla HOM05D000301 ORTHO05D010895 1.0e-13 81.3 220 30.5
Nitab4.5_0011753g0010 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.0e-13 81.3 125 44.8
Actinidia17858 Actinidia chinensis HOM05D000301 ORTHO05D010895 3.1e-10 69.7 129 37.2
Nitab4.5_0022517g0010 Nicotiana tabacum HOM05D000301 ORTHO05D285337 2.9e-08 63.2 128 39.8
CAN.G1041.18 Capsicum annuum HOM05D000301 ORTHO05D010895 6.6e-08 62.0 43 74.4
Nitab4.5_0010418g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 6.6e-08 62.0 121 35.5
Actinidia17857 Actinidia chinensis HOM05D000301 ORTHO05D010895 8.6e-08 61.6 110 36.4
CsaV3_2G006700 Cucumis sativus L. HOM05D000301 ORTHO05D000303 1.9e-07 60.5 119 31.9
CsaV3_2G006710 Cucumis sativus L. HOM05D000301 ORTHO05D000303 1.9e-07 60.5 119 31.9
Nitab4.5_0005249g0040 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.9e-07 60.5 41 70.7
Nitab4.5_0001968g0040 Nicotiana tabacum HOM05D000301 ORTHO05D010895 3.3e-07 59.7 52 55.8
Sc04g0004010 Simmondsia chinensis HOM05D000301 ORTHO05D000303 3.3e-07 59.7 52 53.8
Peaxi162Scf00104g00061 Petunia axillaris HOM05D000301 ORTHO05D010895 7.3e-07 58.5 42 64.3
Gohir.A04G017400 Gossypium hirsutum HOM05D000301 ORTHO05D000303 9.5e-07 58.2 69 46.4
MELO3C027357.2 Cucumis melo HOM05D000301 ORTHO05D000303 1.2e-06 57.8 119 31.1
Thhalv10009438m.g Eutrema salsugineum HOM05D000301 ORTHO05D000303 1.6e-06 57.4 154 33.8
Sc04g0004020 Simmondsia chinensis HOM05D000301 ORTHO05D000303 2.1e-06 57.0 138 31.9
Carub.0001s2704 Capsella rubella HOM05D000301 ORTHO05D000303 3.6e-06 56.2 133 35.3
COL.COLO4_27495 Corchorus olitorius HOM05D000301 ORTHO05D000303 3.6e-06 56.2 171 29.8
Gorai.009G437600 Gossypium raimondii HOM05D000301 ORTHO05D000303 3.6e-06 56.2 105 36.2
Sabra05G0029800 Salix brachista HOM05D000301 ORTHO05D000303 3.6e-06 56.2 102 30.4
Gohir.D05G368900 Gossypium hirsutum HOM05D000301 ORTHO05D000303 4.7e-06 55.8 105 36.2
AUR62033363 Chenopodium quinoa HOM05D000301 ORTHO05D000303 8.0e-06 55.1 138 32.6
Zm00001eb358080 Zea mays HOM05D000301 ORTHO05D000303 8.0e-06 55.1 121 30.6


User provided reference genes

Program Settings