Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.5e-62 241.9 120 100.0
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.2e-58 228.8 121 95.0
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 1.6e-48 196.1 121 78.5
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 2.7e-48 195.3 122 77.9
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 1.8e-47 192.6 126 74.6
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 8.8e-47 190.3 118 78.8
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 5.7e-38 161.0 118 58.5
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 3.7e-37 158.3 117 63.2
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 7.0e-36 154.1 120 60.0
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 1.3e-34 149.8 118 60.2
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 3.8e-34 148.3 121 57.9
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 6.5e-34 147.5 117 58.1
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 1.4e-33 146.4 120 55.8
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 3.2e-33 145.2 122 58.2
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 3.2e-33 145.2 117 59.8
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 3.2e-33 145.2 117 57.3
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 4.2e-33 144.8 117 56.4
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 9.4e-33 143.7 120 55.0
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.2e-32 143.3 117 57.3
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.6e-32 142.9 119 56.3
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 2.1e-32 142.5 117 56.4
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 3.6e-32 141.7 118 55.9
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 4.7e-32 141.4 118 56.8
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 1.8e-31 139.4 121 53.7
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 1.8e-31 139.4 108 60.2
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 2.3e-31 139.0 121 55.4
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 3.9e-31 138.3 118 54.2
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 1.1e-30 136.7 118 54.2
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 1.1e-30 136.7 118 55.9
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 1.7e-29 132.9 123 52.0
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 1.7e-29 132.9 114 57.9
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 4.8e-29 131.3 130 51.5
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 8.2e-29 130.6 117 51.3
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 1.4e-28 129.8 117 51.3
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 1.4e-28 129.8 117 47.9
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.4e-28 129.0 117 50.4
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 2.4e-28 129.0 117 54.7
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 3.1e-28 128.6 120 51.7
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 5.3e-28 127.9 117 50.4
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 2.0e-27 125.9 123 50.4
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 5.9e-27 124.4 130 44.6
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 7.7e-27 124.0 117 49.6
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 7.7e-27 124.0 124 49.2
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 1.3e-26 123.2 124 49.2
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 1.7e-26 122.9 120 50.8
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 3.8e-26 121.7 115 47.8
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 6.5e-26 120.9 123 49.6
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 6.5e-26 120.9 126 46.0
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 6.5e-26 120.9 118 48.3
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 8.5e-26 120.6 116 51.7
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 1.1e-25 120.2 118 48.3
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 1.5e-25 119.8 123 51.2
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 1.5e-25 119.8 123 51.2
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 1.9e-25 119.4 120 50.0
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 1.9e-25 119.4 125 50.4
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 1.9e-25 119.4 125 50.4
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 2.5e-25 119.0 120 48.3
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 2.5e-25 119.0 119 45.4
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 5.5e-25 117.9 123 48.8
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 5.5e-25 117.9 131 45.8
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 7.2e-25 117.5 124 48.4
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 1.6e-24 116.3 122 44.3
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 2.1e-24 115.9 104 51.0
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 2.7e-24 115.5 124 49.2
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.7e-24 115.5 131 45.0
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 3.6e-24 115.2 122 46.7
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 6.1e-24 114.4 118 44.1
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 8.0e-24 114.0 128 48.4
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.4e-23 113.2 127 44.1
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 5.2e-23 111.3 65 81.5
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 5.2e-23 111.3 116 48.3
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 5.2e-23 111.3 120 47.5
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 8.8e-23 110.5 117 44.4
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 2.6e-22 109.0 124 44.4
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 2.6e-22 109.0 118 43.2
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 5.7e-22 107.8 108 46.3
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 5.7e-22 107.8 117 45.3
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 2.2e-21 105.9 119 45.4
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 4.8e-21 104.8 127 40.9
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 6.3e-21 104.4 95 54.7
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 8.3e-21 104.0 118 44.9
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 1.4e-20 103.2 119 43.7
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 4.1e-20 101.7 118 43.2
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 9.1e-20 100.5 106 43.4
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 9.1e-20 100.5 106 43.4
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 2.0e-19 99.4 126 39.7
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 2.0e-19 99.4 68 66.2
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 5.9e-19 97.8 80 60.0
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 2.1e-16 89.4 97 42.3
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 1.0e-15 87.0 70 54.3
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.5e-14 83.2 87 44.8
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 4.4e-14 81.6 105 38.1
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 1.0e-10 70.5 49 65.3
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 3.8e-10 68.6 63 55.6


User provided reference genes

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